Literature DB >> 15653906

Gramella echinicola gen. nov., sp. nov., a novel halophilic bacterium of the family Flavobacteriaceae isolated from the sea urchin Strongylocentrotus intermedius.

Olga I Nedashkovskaya1, Seung Bum Kim2, Anatoly M Lysenko3, Galina M Frolova1, Valery V Mikhailov1, Kyung Sook Bae2, Dong Hyuck Lee4, In Seop Kim4.   

Abstract

A novel marine bacterium, strain KMM 6050T, was isolated from the sea urchin Strongylocentrotus intermedius, which inhabits the Sea of Japan. The strain studied was strictly aerobic, heterotrophic, yellow-orange-pigmented, motile by gliding, Gram-negative and oxidase-, catalase-, beta-galactosidase- and alkaline phosphatase-positive. The results of 16S rRNA gene sequence analysis showed that strain KMM 6050T occupies a distinct lineage within the family Flavobacteriaceae and is most closely related to the species Mesonia algae and Salegentibacter salegens (sequence similarity of 92.5-92.6 %). The DNA G+C content of KMM 6050T was 39.6 mol%. The major respiratory quinone was MK-6. The predominant fatty acids were i15 : 0, a15 : 0, 15 : 0, i16 : 1, i16 : 0, i16 : 0 3-OH and i17 : 0 3-OH. On the basis of phenotypic, chemotaxonomic, genotypic and phylogenetic characteristics, the novel bacterium has been assigned to the genus Gramella gen. nov., as Gramella echinicola sp. nov. The type strain is KMM 6050T (=KCTC 12278T=NBRC 100593T=LMG 22585T).

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15653906     DOI: 10.1099/ijs.0.63314-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  7 in total

1.  Gramella lutea sp. nov., a Novel Species of the Family Flavobacteriaceae Isolated from Marine Sediment.

Authors:  Jaewoo Yoon; Yujin Jo; Geum Jin Kim; Hyukjae Choi
Journal:  Curr Microbiol       Date:  2015-06-02       Impact factor: 2.188

2.  Comparative genome analysis of the Flavobacteriales bacterium strain UJ101, isolated from the gut of Atergatis reticulatus.

Authors:  Jhung-Ahn Yang; Sung-Hyun Yang; Junghee Kim; Kae Kyoung Kwon; Hyun-Myung Oh
Journal:  J Microbiol       Date:  2017-06-30       Impact factor: 3.422

3.  Gramella jeungdoensis sp. nov., isolated from a solar saltern in Korea.

Authors:  Yochan Joung; Haneul Kim; Taeyong Jang; Tae-Seok Ahn; Kiseong Joh
Journal:  J Microbiol       Date:  2011-12-28       Impact factor: 3.422

4.  Gramella fulva sp. nov., isolated from a dry surface of tidal flat.

Authors:  Sae Hyun Hwang; Woon Mo Hwang; Keunsoo Kang; Tae-Young Ahn
Journal:  J Microbiol       Date:  2018-11-19       Impact factor: 3.422

5.  Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050(T) (DSM 19838(T)) and Gramella portivictoriae UST040801-001(T) (DSM 23547(T)), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et al. 2014 and Gramella portivictoriae Lau et al. 2005.

Authors:  Irina Panschin; Sixing Huang; Jan P Meier-Kolthoff; Brian J Tindall; Manfred Rohde; Susanne Verbarg; Alla Lapidus; James Han; Stephan Trong; Matthew Haynes; T B K Reddy; Marcel Huntemann; Amrita Pati; Natalia N Ivanova; Konstantinos Mavromatis; Victor Markowitz; Tanja Woyke; Markus Göker; Hans-Peter Klenk; Nikos C Kyrpides; Richard L Hahnke
Journal:  Stand Genomic Sci       Date:  2016-06-03

6.  Characterization of Potential Polysaccharide Utilization Systems in the Marine Bacteroidetes Gramella Flava JLT2011 Using a Multi-Omics Approach.

Authors:  Kai Tang; Yingfan Lin; Yu Han; Nianzhi Jiao
Journal:  Front Microbiol       Date:  2017-02-14       Impact factor: 5.640

7.  Structural determination of the lipid A from the deep-sea bacterium Zunongwangia profunda SM-A87: a small-scale approach.

Authors:  Molly Dorothy Pither; Mei-Ling Sun; Immacolata Speciale; Alba Silipo; Yu-Zhong Zhang; Antonio Molinaro; Flaviana Di Lorenzo
Journal:  Glycoconj J       Date:  2022-08-05       Impact factor: 3.009

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.