Literature DB >> 21148671

Gramella gaetbulicola sp. nov., a member of the family Flavobacteriaceae isolated from foreshore soil.

Sung-Heun Cho1, Song-Hee Chae1, Myoungho Cho1, Tae-Ui Kim1, Seri Choi1, Ji-Hye Han1, Young Tae Kim1, Yochan Joung2, Kiseong Joh2, Olga I Nedashkovskaya3, Seung Bum Kim1.   

Abstract

A Gram-reaction-negative, yellow-pigmented, gliding, rod-shaped, aerobic bacterium (RA5-111(T)) was isolated from foreshore soil. The taxonomic status of the novel isolate was determined using a polyphasic approach. On the basis of 16S rRNA gene sequence similarities, strain RA5-111(T) could be assigned to the genus Gramella, with sequence similarities of 97.7, 97.3 and 96.2 % to the type strains of Gramella echinicola, Gramella portivictoriae and Gramella marina, respectively. Chemotaxonomic and phenotypic characteristics also supported the affiliation of strain RA5-111(T) with the genus Gramella. The genomic DNA G+C content was 39.1 mol%. The isolate contained MK-6 as the predominant menaquinone, iso-C(15 : 0), iso-C(17 : 0) 3-OH and a summed feature (iso-C(15 : 0) 2-OH and/or C(16 : 1)ω7c) as major fatty acids, and phosphatidylethanolamine and unknown phospholipids as the polar lipids. DNA-DNA relatedness, phenotypic, genotypic and chemotaxonomic data clearly indicate that the isolate represents a novel species of the genus Gramella, for which the name Gramella gaetbulicola sp. nov. is proposed. The type strain is RA5-111(T) ( = KCTC 23022(T) = JCM 16528(T) = NBRC 106272(T)).

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Year:  2010        PMID: 21148671     DOI: 10.1099/ijs.0.027599-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

1.  Gramella lutea sp. nov., a Novel Species of the Family Flavobacteriaceae Isolated from Marine Sediment.

Authors:  Jaewoo Yoon; Yujin Jo; Geum Jin Kim; Hyukjae Choi
Journal:  Curr Microbiol       Date:  2015-06-02       Impact factor: 2.188

2.  Gramella jeungdoensis sp. nov., isolated from a solar saltern in Korea.

Authors:  Yochan Joung; Haneul Kim; Taeyong Jang; Tae-Seok Ahn; Kiseong Joh
Journal:  J Microbiol       Date:  2011-12-28       Impact factor: 3.422

3.  Gramella fulva sp. nov., isolated from a dry surface of tidal flat.

Authors:  Sae Hyun Hwang; Woon Mo Hwang; Keunsoo Kang; Tae-Young Ahn
Journal:  J Microbiol       Date:  2018-11-19       Impact factor: 3.422

4.  Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050(T) (DSM 19838(T)) and Gramella portivictoriae UST040801-001(T) (DSM 23547(T)), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et al. 2014 and Gramella portivictoriae Lau et al. 2005.

Authors:  Irina Panschin; Sixing Huang; Jan P Meier-Kolthoff; Brian J Tindall; Manfred Rohde; Susanne Verbarg; Alla Lapidus; James Han; Stephan Trong; Matthew Haynes; T B K Reddy; Marcel Huntemann; Amrita Pati; Natalia N Ivanova; Konstantinos Mavromatis; Victor Markowitz; Tanja Woyke; Markus Göker; Hans-Peter Klenk; Nikos C Kyrpides; Richard L Hahnke
Journal:  Stand Genomic Sci       Date:  2016-06-03
  4 in total

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