Literature DB >> 22199972

5-(4-Meth-oxy-phen-yl)-3-(pyridin-2-yl)-4,5-dihydro-1H-pyrazole-1-carbothio-amide.

Phonpawee Nonthason, Thitipone Suwunwong, Suchada Chantrapromma, Hoong-Kun Fun.   

Abstract

In the title compound, C(16)H(16)N(4)OS, the dihedral angle between the pyridine and benzene rings is 81.08 (6)°. The pyrazole ring makes dihedral angles of 12.36 (7) and 87.96 (6)°, respectively, with the pyridine and benzene rings. In the crystal, mol-ecules are linked by N-H⋯O and N-H⋯S hydrogen bonds and a weak C-H⋯S inter-action into a layer parallel to the ab plane. Weak C-H⋯π and π-π inter-actions [centroid-centroid distances = 3.7043 (9) and 3.8120 (7) Å] are also observed.

Entities:  

Year:  2011        PMID: 22199972      PMCID: PMC3239124          DOI: 10.1107/S1600536811050033

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For a related structure, see: Fun et al. (2011 ▶). For background to and applications of pyrazoline derivatives, see: Amir et al. (2008 ▶); Bai et al. (2007 ▶); Gong et al. (2011 ▶); Husain et al. (2008 ▶); Ji & Shi (2006 ▶); Manna & Agrawal (2009 ▶); Shoman et al. (2009 ▶).

Experimental

Crystal data

C16H16N4OS M = 312.40 Triclinic, a = 6.2434 (2) Å b = 9.9348 (4) Å c = 13.6564 (6) Å α = 107.762 (1)° β = 99.506 (1)° γ = 94.331 (1)° V = 788.43 (5) Å3 Z = 2 Mo Kα radiation μ = 0.21 mm−1 T = 297 K 0.48 × 0.34 × 0.19 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.906, T max = 0.961 19134 measured reflections 4529 independent reflections 3927 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.122 S = 1.05 4529 reflections 208 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.31 e Å−3 Δρmin = −0.18 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811050033/is5010sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811050033/is5010Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811050033/is5010Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H16N4OSZ = 2
Mr = 312.40F(000) = 328
Triclinic, P1Dx = 1.316 Mg m3
Hall symbol: -P 1Melting point = 468–469 K
a = 6.2434 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.9348 (4) ÅCell parameters from 4529 reflections
c = 13.6564 (6) Åθ = 1.6–30.0°
α = 107.762 (1)°µ = 0.21 mm1
β = 99.506 (1)°T = 297 K
γ = 94.331 (1)°Block, yellow
V = 788.43 (5) Å30.48 × 0.34 × 0.19 mm
Bruker SMART APEXII CCD diffractometer4529 independent reflections
Radiation source: fine-focus sealed tube3927 reflections with I > 2σ(I)
graphiteRint = 0.019
Detector resolution: 8.33 pixels mm-1θmax = 30.0°, θmin = 1.6°
ω scansh = −8→8
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −13→13
Tmin = 0.906, Tmax = 0.961l = −19→18
19134 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.122H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0685P)2 + 0.1373P] where P = (Fo2 + 2Fc2)/3
4529 reflections(Δ/σ)max = 0.001
208 parametersΔρmax = 0.31 e Å3
0 restraintsΔρmin = −0.18 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.50444 (5)0.19990 (4)0.13335 (2)0.04687 (11)
O11.0431 (2)0.76342 (12)0.12097 (10)0.0645 (3)
N11.06459 (15)0.13465 (10)0.27835 (7)0.03555 (19)
N20.88621 (16)0.19975 (9)0.25049 (8)0.0376 (2)
N31.48004 (19)0.27191 (11)0.50833 (8)0.0458 (2)
N40.7587 (2)−0.00487 (12)0.11494 (10)0.0497 (3)
H2N40.873 (3)−0.0389 (18)0.1330 (13)0.053 (4)*
H1N40.667 (3)−0.046 (2)0.0593 (15)0.063 (5)*
C11.6684 (2)0.24072 (15)0.55409 (11)0.0537 (3)
H1A1.73410.30000.62120.064*
C21.7700 (2)0.12711 (17)0.50832 (13)0.0568 (3)
H2A1.90030.11010.54370.068*
C31.6751 (2)0.03853 (17)0.40878 (12)0.0562 (3)
H3A1.7411−0.03890.37540.067*
C41.4800 (2)0.06681 (14)0.35939 (10)0.0453 (3)
H4A1.41170.00840.29240.054*
C51.38864 (18)0.18390 (11)0.41175 (8)0.0354 (2)
C61.18371 (18)0.22122 (11)0.36368 (8)0.0347 (2)
C71.0938 (2)0.35789 (12)0.40702 (9)0.0416 (2)
H7A1.20140.43990.41910.050*
H7B1.04660.36300.47210.050*
C80.89669 (19)0.34932 (11)0.31893 (9)0.0364 (2)
H8A0.76270.36220.34740.044*
C90.93345 (18)0.45497 (11)0.26179 (8)0.0349 (2)
C100.8047 (2)0.56443 (13)0.26752 (10)0.0426 (3)
H10A0.69070.57000.30400.051*
C110.8453 (2)0.66491 (14)0.21933 (11)0.0486 (3)
H11A0.75860.73790.22390.058*
C121.0148 (2)0.65770 (13)0.16395 (10)0.0439 (3)
C131.1430 (2)0.54861 (14)0.15695 (11)0.0468 (3)
H13A1.25600.54230.11970.056*
C141.1009 (2)0.44869 (13)0.20617 (10)0.0434 (3)
H14A1.18750.37570.20160.052*
C150.72789 (18)0.12674 (12)0.16632 (9)0.0360 (2)
C161.2161 (3)0.7646 (2)0.06553 (15)0.0706 (5)
H16A1.22160.84780.04370.106*
H16B1.19100.68060.00500.106*
H16C1.35260.76620.11040.106*
U11U22U33U12U13U23
S10.03741 (17)0.05216 (19)0.04509 (18)0.01644 (13)0.00125 (12)0.00828 (13)
O10.0804 (8)0.0561 (6)0.0773 (7)0.0238 (5)0.0297 (6)0.0404 (6)
N10.0342 (4)0.0324 (4)0.0385 (4)0.0070 (3)0.0025 (3)0.0110 (3)
N20.0369 (4)0.0315 (4)0.0401 (5)0.0093 (3)0.0002 (4)0.0083 (4)
N30.0493 (6)0.0392 (5)0.0412 (5)0.0060 (4)−0.0046 (4)0.0090 (4)
N40.0486 (6)0.0380 (5)0.0484 (6)0.0120 (4)−0.0096 (5)0.0021 (4)
C10.0516 (7)0.0504 (7)0.0480 (7)0.0033 (6)−0.0122 (6)0.0121 (5)
C20.0424 (7)0.0624 (8)0.0618 (8)0.0117 (6)−0.0060 (6)0.0222 (7)
C30.0487 (7)0.0586 (8)0.0590 (8)0.0218 (6)0.0059 (6)0.0147 (6)
C40.0450 (6)0.0469 (6)0.0403 (6)0.0131 (5)0.0037 (5)0.0095 (5)
C50.0356 (5)0.0350 (5)0.0356 (5)0.0037 (4)0.0030 (4)0.0141 (4)
C60.0372 (5)0.0325 (5)0.0344 (5)0.0062 (4)0.0042 (4)0.0119 (4)
C70.0509 (6)0.0340 (5)0.0358 (5)0.0108 (4)0.0008 (4)0.0084 (4)
C80.0388 (5)0.0323 (5)0.0359 (5)0.0096 (4)0.0054 (4)0.0076 (4)
C90.0363 (5)0.0314 (5)0.0345 (5)0.0102 (4)0.0039 (4)0.0073 (4)
C100.0395 (6)0.0425 (6)0.0495 (6)0.0170 (5)0.0121 (5)0.0160 (5)
C110.0509 (7)0.0433 (6)0.0590 (7)0.0242 (5)0.0132 (6)0.0218 (6)
C120.0509 (7)0.0394 (6)0.0432 (6)0.0109 (5)0.0073 (5)0.0157 (5)
C130.0510 (7)0.0456 (6)0.0492 (6)0.0157 (5)0.0188 (5)0.0162 (5)
C140.0466 (6)0.0399 (5)0.0492 (6)0.0204 (5)0.0157 (5)0.0157 (5)
C150.0347 (5)0.0363 (5)0.0363 (5)0.0059 (4)0.0045 (4)0.0118 (4)
C160.0854 (12)0.0663 (10)0.0737 (11)0.0083 (9)0.0283 (9)0.0361 (9)
S1—C151.6801 (11)C5—C61.4657 (15)
O1—C121.3644 (16)C6—C71.4978 (15)
O1—C161.419 (2)C7—C81.5498 (16)
N1—C61.2871 (14)C7—H7A0.9700
N1—N21.3864 (12)C7—H7B0.9700
N2—C151.3536 (14)C8—C91.5118 (15)
N2—C81.4844 (14)C8—H8A0.9800
N3—C11.3414 (17)C9—C141.3846 (17)
N3—C51.3425 (14)C9—C101.3911 (15)
N4—C151.3273 (15)C10—C111.3825 (18)
N4—H2N40.847 (18)C10—H10A0.9300
N4—H1N40.84 (2)C11—C121.3927 (19)
C1—C21.370 (2)C11—H11A0.9300
C1—H1A0.9300C12—C131.3848 (17)
C2—C31.378 (2)C13—C141.3901 (18)
C2—H2A0.9300C13—H13A0.9300
C3—C41.3834 (18)C14—H14A0.9300
C3—H3A0.9300C16—H16A0.9600
C4—C51.3847 (16)C16—H16B0.9600
C4—H4A0.9300C16—H16C0.9600
C12—O1—C16118.84 (12)N2—C8—C9112.03 (9)
C6—N1—N2107.90 (9)N2—C8—C7100.52 (8)
C15—N2—N1119.54 (9)C9—C8—C7113.07 (9)
C15—N2—C8127.01 (9)N2—C8—H8A110.3
N1—N2—C8113.43 (8)C9—C8—H8A110.3
C1—N3—C5116.48 (12)C7—C8—H8A110.3
C15—N4—H2N4121.2 (11)C14—C9—C10118.46 (11)
C15—N4—H1N4115.2 (13)C14—C9—C8120.98 (10)
H2N4—N4—H1N4123.0 (17)C10—C9—C8120.52 (10)
N3—C1—C2124.18 (13)C11—C10—C9120.44 (11)
N3—C1—H1A117.9C11—C10—H10A119.8
C2—C1—H1A117.9C9—C10—H10A119.8
C1—C2—C3118.64 (12)C10—C11—C12120.53 (11)
C1—C2—H2A120.7C10—C11—H11A119.7
C3—C2—H2A120.7C12—C11—H11A119.7
C2—C3—C4118.81 (13)O1—C12—C13124.58 (12)
C2—C3—H3A120.6O1—C12—C11115.81 (11)
C4—C3—H3A120.6C13—C12—C11119.60 (11)
C3—C4—C5118.60 (12)C12—C13—C14119.22 (12)
C3—C4—H4A120.7C12—C13—H13A120.4
C5—C4—H4A120.7C14—C13—H13A120.4
N3—C5—C4123.29 (11)C9—C14—C13121.75 (11)
N3—C5—C6115.16 (10)C9—C14—H14A119.1
C4—C5—C6121.54 (10)C13—C14—H14A119.1
N1—C6—C5120.88 (10)N4—C15—N2115.95 (10)
N1—C6—C7114.44 (10)N4—C15—S1123.24 (9)
C5—C6—C7124.68 (10)N2—C15—S1120.78 (8)
C6—C7—C8102.65 (9)O1—C16—H16A109.5
C6—C7—H7A111.2O1—C16—H16B109.5
C8—C7—H7A111.2H16A—C16—H16B109.5
C6—C7—H7B111.2O1—C16—H16C109.5
C8—C7—H7B111.2H16A—C16—H16C109.5
H7A—C7—H7B109.2H16B—C16—H16C109.5
C6—N1—N2—C15−175.98 (10)C6—C7—C8—N29.45 (11)
C6—N1—N2—C85.41 (13)C6—C7—C8—C9−110.14 (10)
C5—N3—C1—C20.3 (2)N2—C8—C9—C14−50.50 (14)
N3—C1—C2—C30.3 (2)C7—C8—C9—C1462.24 (14)
C1—C2—C3—C4−0.7 (2)N2—C8—C9—C10132.10 (11)
C2—C3—C4—C50.5 (2)C7—C8—C9—C10−115.16 (12)
C1—N3—C5—C4−0.49 (19)C14—C9—C10—C11−0.53 (19)
C1—N3—C5—C6−179.71 (11)C8—C9—C10—C11176.93 (11)
C3—C4—C5—N30.1 (2)C9—C10—C11—C120.3 (2)
C3—C4—C5—C6179.25 (12)C16—O1—C12—C13−0.5 (2)
N2—N1—C6—C5−178.44 (9)C16—O1—C12—C11178.55 (14)
N2—N1—C6—C71.85 (13)C10—C11—C12—O1−178.90 (13)
N3—C5—C6—N1−169.93 (11)C10—C11—C12—C130.2 (2)
C4—C5—C6—N110.83 (17)O1—C12—C13—C14178.56 (13)
N3—C5—C6—C79.75 (16)C11—C12—C13—C14−0.5 (2)
C4—C5—C6—C7−169.49 (11)C10—C9—C14—C130.26 (19)
N1—C6—C7—C8−7.69 (13)C8—C9—C14—C13−177.19 (11)
C5—C6—C7—C8172.61 (10)C12—C13—C14—C90.2 (2)
C15—N2—C8—C9−67.76 (15)N1—N2—C15—N4−0.80 (16)
N1—N2—C8—C9110.73 (10)C8—N2—C15—N4177.61 (11)
C15—N2—C8—C7171.91 (11)N1—N2—C15—S1177.43 (8)
N1—N2—C8—C7−9.61 (12)C8—N2—C15—S1−4.16 (17)
Cg3 is the centroid of the C9–C14 ring.
D—H···AD—HH···AD···AD—H···A
N4—H2N4···O1i0.845 (19)2.278 (19)3.0238 (18)147.4 (17)
N4—H1N4···S1ii0.839 (19)2.603 (19)3.4090 (13)161.6 (18)
C14—H14A···S1iii0.932.823.7033 (14)158
C1—H1A···Cg3iv0.932.603.5005 (15)162
Table 1

Hydrogen-bond geometry (Å, °)

Cg3 is the centroid of the C9–C14 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
N4—H2N4⋯O1i0.845 (19)2.278 (19)3.0238 (18)147.4 (17)
N4—H1N4⋯S1ii0.839 (19)2.603 (19)3.4090 (13)161.6 (18)
C14—H14A⋯S1iii0.932.823.7033 (14)158
C1—H1ACg3iv0.932.603.5005 (15)162

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-07

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3.  5-(4-Fluoro-phen-yl)-3-(4-methyl-phen-yl)-4,5-dihydro-1H-pyrazole-1-carbothio-amide.

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