| Literature DB >> 22199942 |
Farouq F Said, Basem F Ali, Darrin Richeson.
Abstract
In the title compound, C(19)H(36)N(3) (+)·I(-), the orientation of the cyclo-hexyl rings around the planar (sum of N-C-N angles = 360°) CN(3) (+) unit produces steric hindrance around the N-H groups. As a consequence of this particular orientation of the tricyclo-hexyl-guanidinium cation (hereafter denoted CHGH(+)), hydrogen bonding is restricted to classical N-H⋯I and non-clasical (cyclo-hex-yl)C-H⋯I hydrogen bonds. The propeller CHGH(+) cation and the oriented hydrogen-bonding interactions lead to a three-dimensional supra-molecular structure.Entities:
Year: 2011 PMID: 22199942 PMCID: PMC3239094 DOI: 10.1107/S1600536811049683
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H36N3+·I− | |
| Mo | |
| Cubic, | Cell parameters from 30 reflections |
| Hall symbol: P 2ac 2ab 3 | θ = 3.9–6.9° |
| µ = 1.50 mm−1 | |
| Block, colorless | |
| 0.5 × 0.3 × 0.3 mm |
| Bruker P4 diffractometer | 628 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.9°, θmin = 2.2° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 2387 measured reflections | 3 standard reflections every 97 reflections |
| 802 independent reflections | intensity decay: none |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 802 reflections | Δρmax = 0.33 e Å−3 |
| 70 parameters | Δρmin = −0.27 e Å−3 |
| 0 restraints | Absolute structure: Flack (1983), 802 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.08 (8) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| I1 | 0.89107 (4) | 0.89107 (4) | 0.89107 (4) | 0.0589 (2) | |
| N1 | 0.8894 (5) | 0.1398 (4) | 0.7489 (4) | 0.0715 (16) | |
| H1A | 0.8803 | 0.0781 | 0.7728 | 0.086* | |
| C1 | 0.8343 (6) | 0.1657 (6) | 0.6657 (6) | 0.064 (3) | |
| C2 | 0.9631 (6) | 0.2045 (6) | 0.8033 (6) | 0.071 (2) | |
| H2A | 0.9812 | 0.2636 | 0.7591 | 0.086* | |
| C3 | 0.9164 (6) | 0.2440 (8) | 0.9017 (8) | 0.114 (4) | |
| H3A | 0.8951 | 0.1861 | 0.9448 | 0.137* | |
| H3B | 0.8556 | 0.2855 | 0.8862 | 0.137* | |
| C4 | 0.9957 (9) | 0.3091 (9) | 0.9588 (11) | 0.149 (5) | |
| H4A | 1.0115 | 0.3701 | 0.9177 | 0.179* | |
| H4B | 0.9660 | 0.3323 | 1.0239 | 0.179* | |
| C5 | 1.0919 (7) | 0.2525 (9) | 0.9799 (7) | 0.100 (3) | |
| H5A | 1.0780 | 0.1967 | 1.0285 | 0.120* | |
| H5B | 1.1419 | 0.2990 | 1.0116 | 0.120* | |
| C6 | 1.1359 (5) | 0.2091 (7) | 0.8838 (7) | 0.084 (2) | |
| H6A | 1.1957 | 0.1668 | 0.9009 | 0.101* | |
| H6C | 1.1593 | 0.2654 | 0.8397 | 0.101* | |
| C7 | 1.0581 (6) | 0.1441 (7) | 0.8255 (7) | 0.086 (3) | |
| H7C | 1.0885 | 0.1206 | 0.7608 | 0.103* | |
| H7A | 1.0404 | 0.0835 | 0.8663 | 0.103* |
| I1 | 0.0589 (2) | 0.0589 (2) | 0.0589 (2) | −0.0007 (3) | −0.0007 (3) | −0.0007 (3) |
| N1 | 0.084 (4) | 0.060 (3) | 0.070 (4) | −0.014 (4) | −0.026 (4) | 0.014 (3) |
| C1 | 0.064 (3) | 0.064 (3) | 0.064 (3) | −0.012 (4) | −0.012 (4) | 0.012 (4) |
| C2 | 0.082 (6) | 0.071 (5) | 0.061 (5) | −0.020 (5) | −0.024 (4) | 0.010 (4) |
| C3 | 0.082 (7) | 0.132 (8) | 0.129 (9) | 0.040 (6) | −0.022 (7) | −0.045 (8) |
| C4 | 0.129 (9) | 0.147 (10) | 0.172 (12) | 0.014 (9) | −0.035 (9) | −0.102 (10) |
| C5 | 0.097 (7) | 0.138 (8) | 0.065 (5) | −0.021 (8) | −0.028 (6) | 0.008 (6) |
| C6 | 0.064 (5) | 0.090 (6) | 0.098 (6) | −0.014 (4) | −0.005 (5) | 0.007 (6) |
| C7 | 0.049 (4) | 0.104 (7) | 0.105 (6) | −0.010 (4) | −0.001 (5) | −0.026 (6) |
| N1—C1 | 1.330 (5) | C4—C5 | 1.465 (13) |
| N1—C2 | 1.446 (9) | C4—H4A | 0.9700 |
| N1—H1A | 0.8600 | C4—H4B | 0.9700 |
| C1—N1i | 1.330 (5) | C5—C6 | 1.473 (13) |
| C1—N1ii | 1.330 (5) | C5—H5A | 0.9700 |
| C2—C7 | 1.479 (10) | C5—H5B | 0.9700 |
| C2—C3 | 1.493 (11) | C6—C7 | 1.508 (10) |
| C2—H2A | 0.9800 | C6—H6A | 0.9700 |
| C3—C4 | 1.514 (13) | C6—H6C | 0.9700 |
| C3—H3A | 0.9700 | C7—H7C | 0.9700 |
| C3—H3B | 0.9700 | C7—H7A | 0.9700 |
| C1—N1—C2 | 126.7 (5) | C5—C4—H4B | 109.1 |
| C1—N1—H1A | 116.7 | C3—C4—H4B | 109.1 |
| C2—N1—H1A | 116.7 | H4A—C4—H4B | 107.8 |
| N1i—C1—N1 | 119.99 (3) | C4—C5—C6 | 111.1 (8) |
| N1i—C1—N1ii | 119.99 (3) | C4—C5—H5A | 109.4 |
| N1—C1—N1ii | 119.99 (3) | C6—C5—H5A | 109.4 |
| N1—C2—C7 | 109.5 (6) | C4—C5—H5B | 109.4 |
| N1—C2—C3 | 110.1 (7) | C6—C5—H5B | 109.4 |
| C7—C2—C3 | 110.4 (7) | H5A—C5—H5B | 108.0 |
| N1—C2—H2A | 108.9 | C5—C6—C7 | 112.0 (7) |
| C7—C2—H2A | 108.9 | C5—C6—H6A | 109.2 |
| C3—C2—H2A | 108.9 | C7—C6—H6A | 109.2 |
| C2—C3—C4 | 109.3 (8) | C5—C6—H6C | 109.2 |
| C2—C3—H3A | 109.8 | C7—C6—H6C | 109.2 |
| C4—C3—H3A | 109.8 | H6A—C6—H6C | 107.9 |
| C2—C3—H3B | 109.8 | C2—C7—C6 | 110.8 (7) |
| C4—C3—H3B | 109.8 | C2—C7—H7C | 109.5 |
| H3A—C3—H3B | 108.3 | C6—C7—H7C | 109.5 |
| C5—C4—C3 | 112.7 (8) | C2—C7—H7A | 109.5 |
| C5—C4—H4A | 109.1 | C6—C7—H7A | 109.5 |
| C3—C4—H4A | 109.1 | H7C—C7—H7A | 108.1 |
| H··· | ||||
| N1—H1A···I1iii | 0.86 | 2.86 | 3.693 (5) | 165 |
| C2—H2A···I1iv | 0.98 | 3.03 | 3.950 (5) | 158 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.86 | 3.693 (5) | 165 |
| C2—H2 | 0.98 | 3.03 | 3.950 (5) | 158 |
Symmetry codes: (i) ; (ii) .