Literature DB >> 22199909

1-Benzyl-6-chloro-indoline-2,3-dione.

Hua-Quan Liu1, Dong-Mei Fan, De-Cai Wang, Ping-Kai Ou-Yang.   

Abstract

In the title compound, C(15)H(10)ClNO(2),the dihedral angle between the mean planes of the benzene and 6-chloro-indoline-2,3-dione ring systems, linked through a methyl-ene group, is 81.68 (10)°. In the crystal, mol-ecules are connected by C-H⋯O hydrogen bonds, generating C(6) chains propagating in [010].

Entities:  

Year:  2011        PMID: 22199909      PMCID: PMC3239061          DOI: 10.1107/S1600536811048665

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to isatin derivatives, see: Vine et al. (2007 ▶); Matesic et al. (2008 ▶). For further synthetic details, see: Bouhfid et al. (2005 ▶).

Experimental

Crystal data

C15H10ClNO2 M = 271.69 Triclinic, a = 7.1870 (14) Å b = 7.5800 (15) Å c = 12.012 (2) Å α = 80.24 (3)° β = 84.90 (3)° γ = 79.74 (3)° V = 633.4 (2) Å3 Z = 2 Mo Kα radiation μ = 0.30 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.916, T max = 0.971 2520 measured reflections 2322 independent reflections 1837 reflections with I > 2σ(I) R int = 0.015 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.155 S = 1.00 2322 reflections 172 parameters 1 restraint H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.25 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811048665/hb6512sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811048665/hb6512Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811048665/hb6512Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H10ClNO2Z = 2
Mr = 271.69F(000) = 280
Triclinic, P1Dx = 1.424 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.1870 (14) ÅCell parameters from 25 reflections
b = 7.5800 (15) Åθ = 10–13°
c = 12.012 (2) ŵ = 0.30 mm1
α = 80.24 (3)°T = 293 K
β = 84.90 (3)°Block, yellow
γ = 79.74 (3)°0.30 × 0.20 × 0.10 mm
V = 633.4 (2) Å3
Enraf–Nonius CAD-4 diffractometer1837 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.015
graphiteθmax = 25.4°, θmin = 1.7°
ω/2θ scansh = 0→8
Absorption correction: ψ scan (North et al., 1968)k = −8→9
Tmin = 0.916, Tmax = 0.971l = −14→14
2520 measured reflections3 standard reflections every 200 reflections
2322 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.155H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.1P)2 + 0.160P] where P = (Fo2 + 2Fc2)/3
2322 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 0.19 e Å3
1 restraintΔρmin = −0.25 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl0.15893 (11)0.74198 (12)0.63411 (6)0.0780 (3)
N0.3532 (3)0.5031 (3)0.25370 (16)0.0484 (5)
O10.3966 (3)0.0350 (3)0.3312 (2)0.0835 (7)
C10.0178 (3)0.6495 (3)0.1103 (2)0.0534 (6)
H1A0.06670.53100.09990.064*
O20.4404 (3)0.3028 (3)0.12621 (18)0.0805 (7)
C2−0.1670 (4)0.7221 (4)0.0844 (2)0.0599 (7)
H2A−0.24130.65260.05670.072*
C3−0.2404 (4)0.8970 (4)0.0998 (2)0.0608 (7)
H3A−0.36440.94610.08230.073*
C4−0.1308 (4)0.9994 (4)0.1409 (2)0.0640 (7)
H4A−0.18091.11770.15150.077*
C50.0548 (4)0.9268 (3)0.1666 (2)0.0562 (6)
H5A0.12830.99730.19420.067*
C60.1314 (3)0.7513 (3)0.15178 (18)0.0446 (5)
C70.3348 (3)0.6736 (3)0.1755 (2)0.0514 (6)
H7A0.40570.65380.10490.062*
H7B0.38960.76090.20710.062*
C80.3061 (3)0.4880 (3)0.37094 (19)0.0432 (5)
C90.2568 (3)0.6255 (3)0.4348 (2)0.0477 (6)
H9A0.24890.74700.40270.057*
C100.2197 (3)0.5730 (4)0.5496 (2)0.0528 (6)
C110.2296 (4)0.3939 (4)0.6003 (2)0.0634 (7)
H11A0.20300.36500.67780.076*
C120.2797 (4)0.2591 (4)0.5343 (3)0.0622 (7)
H12A0.28750.13780.56680.075*
C130.3180 (3)0.3053 (3)0.4202 (2)0.0502 (6)
C140.3748 (3)0.1993 (3)0.3277 (2)0.0582 (7)
C150.3958 (3)0.3341 (3)0.2226 (2)0.0569 (7)
U11U22U33U12U13U23
Cl0.0726 (5)0.1012 (7)0.0686 (5)−0.0153 (4)0.0032 (4)−0.0405 (4)
N0.0482 (11)0.0473 (11)0.0489 (11)0.0000 (8)−0.0083 (9)−0.0108 (8)
O10.0867 (15)0.0451 (11)0.1232 (19)0.0015 (10)−0.0367 (13)−0.0231 (11)
C10.0524 (14)0.0538 (14)0.0537 (14)−0.0048 (11)−0.0034 (11)−0.0114 (11)
O20.0847 (14)0.0836 (15)0.0721 (14)0.0207 (11)−0.0193 (11)−0.0381 (11)
C20.0532 (15)0.0760 (18)0.0523 (15)−0.0125 (13)−0.0058 (11)−0.0116 (12)
C30.0512 (14)0.0773 (18)0.0454 (13)0.0050 (13)−0.0029 (11)−0.0023 (12)
C40.0730 (18)0.0544 (15)0.0553 (15)0.0097 (13)−0.0018 (13)−0.0051 (12)
C50.0682 (16)0.0525 (14)0.0487 (14)−0.0091 (12)−0.0068 (12)−0.0094 (11)
C60.0498 (13)0.0476 (13)0.0342 (11)−0.0078 (10)−0.0002 (9)−0.0016 (9)
C70.0474 (13)0.0574 (14)0.0489 (13)−0.0112 (11)−0.0016 (10)−0.0055 (11)
C80.0347 (11)0.0441 (12)0.0510 (13)−0.0048 (9)−0.0096 (9)−0.0066 (9)
C90.0441 (12)0.0449 (12)0.0550 (14)−0.0073 (10)−0.0075 (10)−0.0077 (10)
C100.0415 (12)0.0674 (16)0.0533 (14)−0.0119 (11)−0.0056 (10)−0.0156 (12)
C110.0532 (15)0.083 (2)0.0517 (15)−0.0192 (13)−0.0068 (12)0.0057 (13)
C120.0577 (15)0.0552 (15)0.0711 (18)−0.0142 (12)−0.0175 (13)0.0090 (13)
C130.0419 (12)0.0435 (13)0.0656 (16)−0.0075 (9)−0.0162 (11)−0.0027 (11)
C140.0484 (13)0.0441 (13)0.0858 (19)0.0003 (10)−0.0270 (13)−0.0175 (12)
C150.0471 (13)0.0589 (15)0.0652 (16)0.0085 (11)−0.0178 (11)−0.0216 (12)
Cl—C101.739 (3)C5—H5A0.9300
N—C151.370 (3)C6—C71.509 (3)
N—C81.409 (3)C7—H7A0.9700
N—C71.456 (3)C7—H7B0.9700
O1—C141.221 (3)C8—C91.375 (3)
C1—C21.385 (4)C8—C131.402 (3)
C1—C61.391 (3)C9—C101.385 (4)
C1—H1A0.9300C9—H9A0.9300
O2—C151.224 (3)C10—C111.383 (4)
C2—C31.374 (4)C11—C121.377 (4)
C2—H2A0.9300C11—H11A0.9300
C3—C41.372 (4)C12—C131.372 (4)
C3—H3A0.9300C12—H12A0.9300
C4—C51.390 (4)C13—C141.467 (4)
C4—H4A0.9300C14—C151.498 (3)
C5—C61.381 (3)
C15—N—C8110.1 (2)H7A—C7—H7B107.8
C15—N—C7125.0 (2)C9—C8—C13121.4 (2)
C8—N—C7124.52 (19)C9—C8—N128.0 (2)
C2—C1—C6121.0 (2)C13—C8—N110.6 (2)
C2—C1—H1A119.5C8—C9—C10116.3 (2)
C6—C1—H1A119.5C8—C9—H9A121.9
C3—C2—C1119.8 (3)C10—C9—H9A121.9
C3—C2—H2A120.1C11—C10—C9123.5 (2)
C1—C2—H2A120.1C11—C10—Cl118.5 (2)
C4—C3—C2120.0 (2)C9—C10—Cl118.0 (2)
C4—C3—H3A120.0C12—C11—C10118.9 (3)
C2—C3—H3A120.0C12—C11—H11A120.5
C3—C4—C5120.1 (3)C10—C11—H11A120.5
C3—C4—H4A119.9C13—C12—C11119.4 (2)
C5—C4—H4A119.9C13—C12—H12A120.3
C6—C5—C4120.7 (3)C11—C12—H12A120.3
C6—C5—H5A119.6C12—C13—C8120.4 (2)
C4—C5—H5A119.6C12—C13—C14133.5 (2)
C5—C6—C1118.2 (2)C8—C13—C14106.1 (2)
C5—C6—C7121.1 (2)O1—C14—C13128.7 (3)
C1—C6—C7120.6 (2)O1—C14—C15125.0 (3)
N—C7—C6112.49 (19)C13—C14—C15106.3 (2)
N—C7—H7A109.1O2—C15—N125.5 (2)
C6—C7—H7A109.1O2—C15—C14127.6 (2)
N—C7—H7B109.1N—C15—C14107.0 (2)
C6—C7—H7B109.1
C6—C1—C2—C3−0.1 (4)Cl—C10—C11—C12−179.28 (19)
C1—C2—C3—C4−0.1 (4)C10—C11—C12—C13−0.1 (4)
C2—C3—C4—C50.3 (4)C11—C12—C13—C8−0.1 (4)
C3—C4—C5—C6−0.2 (4)C11—C12—C13—C14179.6 (2)
C4—C5—C6—C10.1 (4)C9—C8—C13—C120.2 (3)
C4—C5—C6—C7177.8 (2)N—C8—C13—C12179.4 (2)
C2—C1—C6—C50.1 (4)C9—C8—C13—C14−179.6 (2)
C2—C1—C6—C7−177.6 (2)N—C8—C13—C14−0.4 (2)
C15—N—C7—C697.7 (3)C12—C13—C14—O12.7 (5)
C8—N—C7—C6−73.8 (3)C8—C13—C14—O1−177.6 (2)
C5—C6—C7—N126.2 (2)C12—C13—C14—C15−179.3 (3)
C1—C6—C7—N−56.1 (3)C8—C13—C14—C150.4 (2)
C15—N—C8—C9179.4 (2)C8—N—C15—O2179.3 (2)
C7—N—C8—C9−8.0 (3)C7—N—C15—O26.8 (4)
C15—N—C8—C130.3 (3)C8—N—C15—C140.0 (3)
C7—N—C8—C13172.9 (2)C7—N—C15—C14−172.6 (2)
C13—C8—C9—C10−0.1 (3)O1—C14—C15—O2−1.5 (4)
N—C8—C9—C10−179.1 (2)C13—C14—C15—O2−179.5 (3)
C8—C9—C10—C11−0.1 (4)O1—C14—C15—N177.8 (2)
C8—C9—C10—Cl179.39 (16)C13—C14—C15—N−0.2 (3)
C9—C10—C11—C120.3 (4)
D—H···AD—HH···AD···AD—H···A
C9—H9A···O1i0.932.583.431 (3)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9A⋯O1i0.932.583.431 (3)152

Symmetry code: (i) .

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1.  A short history of SHELX.

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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3.  N-phenethyl and N-naphthylmethyl isatins and analogues as in vitro cytotoxic agents.

Authors:  Lidia Matesic; Julie M Locke; John B Bremner; Stephen G Pyne; Danielle Skropeta; Marie Ranson; Kara L Vine
Journal:  Bioorg Med Chem       Date:  2008-01-07       Impact factor: 3.641

4.  Structure validation in chemical crystallography.

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1.  4-Chloro-1-methyl-indoline-2,3-dione.

Authors:  Jian Guang Yu; Wei Tang; De Cai Wang; Hong Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-23

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Authors:  De Cai Wang; Bo Rong Leng; Gui Bin Wang; Ping Wei; Ping Kai Ou-Yang
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