Literature DB >> 22259500

4-Chloro-1-methyl-indoline-2,3-dione.

Jian Guang Yu, Wei Tang, De Cai Wang, Hong Xu.   

Abstract

The title mol-ecule, C(9)H(6)ClNO(2), is essentially planar; the maximum deviation of the indoline ring system is 0.027 (3) Å and the substituents do not deviate by more than 0.075 (2) Å from this plane. Inter-molecular C-H⋯O hydrogen bonds consolidate the crystal structure.

Entities:  

Year:  2011        PMID: 22259500      PMCID: PMC3254552          DOI: 10.1107/S1600536811054171

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the preparation of the title compound, see: Bouhfid et al. (2005 ▶). For a related crystal structure and background to isatin derivatives, see: Liu et al. (2011 ▶).

Experimental

Crystal data

C9H6ClNO2 M = 195.60 Monoclinic, a = 7.4890 (15) Å b = 14.825 (3) Å c = 7.3140 (15) Å β = 90.27 (3)° V = 812.0 (3) Å3 Z = 4 Mo Kα radiation μ = 0.43 mm−1 T = 293 K 0.20 × 0.10 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.919, T max = 0.958 1607 measured reflections 1485 independent reflections 965 reflections with I > 2σ(I) R int = 0.042 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.060 wR(F 2) = 0.155 S = 1.00 1485 reflections 119 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.28 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811054171/pv2493sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811054171/pv2493Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811054171/pv2493Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C9H6ClNO2F(000) = 400
Mr = 195.60Dx = 1.600 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 7.4890 (15) Åθ = 9–12°
b = 14.825 (3) ŵ = 0.43 mm1
c = 7.3140 (15) ÅT = 293 K
β = 90.27 (3)°Block, yellow
V = 812.0 (3) Å30.20 × 0.10 × 0.10 mm
Z = 4
Enraf–Nonius CAD-4 diffractometer965 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.042
graphiteθmax = 25.5°, θmin = 2.7°
ω/2θ scansh = −9→9
Absorption correction: ψ scan (North et al., 1968)k = 0→17
Tmin = 0.919, Tmax = 0.958l = 0→8
1607 measured reflections3 standard reflections every 200 reflections
1485 independent reflections intensity decay: 1%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.060H-atom parameters constrained
wR(F2) = 0.155w = 1/[σ2(Fo2) + (0.075P)2] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
1485 reflectionsΔρmax = 0.28 e Å3
119 parametersΔρmin = −0.28 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.024 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl0.19910 (14)0.55890 (7)0.16100 (16)0.0561 (4)
N0.3254 (4)0.88873 (19)0.2061 (4)0.0430 (8)
O10.6058 (4)0.87503 (19)0.3282 (5)0.0676 (10)
C10.1324 (5)0.6685 (2)0.1324 (5)0.0425 (9)
O20.5204 (4)0.68317 (18)0.3142 (4)0.0606 (9)
C2−0.0323 (5)0.6886 (3)0.0589 (5)0.0490 (11)
H2A−0.10850.64230.02300.059*
C3−0.0848 (5)0.7773 (3)0.0381 (6)0.0540 (12)
H3A−0.19820.7897−0.00780.065*
C40.0265 (5)0.8479 (3)0.0835 (6)0.0484 (10)
H4A−0.00970.90740.06770.058*
C50.1921 (5)0.8279 (2)0.1525 (5)0.0375 (9)
C60.4690 (5)0.8435 (3)0.2721 (6)0.0470 (10)
C70.4229 (5)0.7422 (2)0.2603 (5)0.0412 (9)
C80.2447 (4)0.7390 (2)0.1784 (5)0.0370 (9)
C90.3123 (5)0.9847 (3)0.1887 (7)0.0587 (12)
H9A0.42001.01210.23380.088*
H9B0.21261.00600.25840.088*
H9C0.29571.00030.06240.088*
U11U22U33U12U13U23
Cl0.0597 (7)0.0389 (6)0.0696 (8)−0.0050 (5)−0.0120 (5)−0.0014 (5)
N0.0351 (18)0.0338 (17)0.060 (2)0.0011 (14)−0.0083 (15)−0.0031 (16)
O10.0420 (17)0.0512 (18)0.109 (3)−0.0072 (14)−0.0290 (17)−0.0120 (18)
C10.043 (2)0.042 (2)0.043 (2)−0.0048 (17)−0.0040 (18)−0.0005 (18)
O20.0446 (17)0.0455 (17)0.092 (2)0.0107 (13)−0.0241 (16)−0.0012 (16)
C20.036 (2)0.063 (3)0.048 (2)−0.016 (2)−0.0084 (19)−0.003 (2)
C30.034 (2)0.077 (3)0.051 (2)0.000 (2)−0.0105 (19)0.006 (2)
C40.036 (2)0.056 (2)0.052 (2)0.0071 (19)−0.0058 (18)0.006 (2)
C50.033 (2)0.039 (2)0.041 (2)0.0036 (16)−0.0057 (16)−0.0009 (17)
C60.033 (2)0.043 (2)0.065 (3)0.0051 (18)−0.0069 (19)−0.005 (2)
C70.034 (2)0.037 (2)0.052 (2)0.0065 (17)−0.0039 (18)−0.0021 (19)
C80.0305 (19)0.035 (2)0.045 (2)0.0036 (15)−0.0068 (17)−0.0031 (17)
C90.057 (3)0.035 (2)0.083 (3)0.002 (2)−0.006 (2)0.001 (2)
Cl—C11.712 (4)C3—C41.378 (6)
N—C61.354 (5)C3—H3A0.9300
N—C51.400 (4)C4—C51.369 (5)
N—C91.431 (5)C4—H4A0.9300
O1—C61.197 (4)C5—C81.389 (5)
C1—C21.376 (5)C6—C71.544 (5)
C1—C81.382 (5)C7—C81.461 (5)
O2—C71.204 (4)C9—H9A0.9600
C2—C31.381 (6)C9—H9B0.9600
C2—H2A0.9300C9—H9C0.9600
C6—N—C5110.2 (3)C8—C5—N111.8 (3)
C6—N—C9125.2 (3)O1—C6—N127.3 (4)
C5—N—C9124.6 (3)O1—C6—C7126.1 (4)
C2—C1—C8118.3 (4)N—C6—C7106.6 (3)
C2—C1—Cl120.9 (3)O2—C7—C8131.4 (4)
C8—C1—Cl120.7 (3)O2—C7—C6123.6 (3)
C1—C2—C3120.2 (4)C8—C7—C6104.9 (3)
C1—C2—H2A119.9C1—C8—C5120.8 (3)
C3—C2—H2A119.9C1—C8—C7132.7 (3)
C4—C3—C2121.7 (4)C5—C8—C7106.5 (3)
C4—C3—H3A119.2N—C9—H9A109.5
C2—C3—H3A119.2N—C9—H9B109.5
C5—C4—C3118.0 (4)H9A—C9—H9B109.5
C5—C4—H4A121.0N—C9—H9C109.5
C3—C4—H4A121.0H9A—C9—H9C109.5
C4—C5—C8120.8 (4)H9B—C9—H9C109.5
C4—C5—N127.4 (4)
C8—C1—C2—C3−2.2 (6)N—C6—C7—O2−177.4 (4)
Cl—C1—C2—C3179.5 (3)O1—C6—C7—C8−178.4 (4)
C1—C2—C3—C42.3 (6)N—C6—C7—C81.3 (4)
C2—C3—C4—C5−0.7 (6)C2—C1—C8—C50.6 (6)
C3—C4—C5—C8−1.0 (6)Cl—C1—C8—C5178.9 (3)
C3—C4—C5—N179.6 (4)C2—C1—C8—C7178.7 (4)
C6—N—C5—C4178.3 (4)Cl—C1—C8—C7−3.0 (6)
C9—N—C5—C4−3.1 (6)C4—C5—C8—C11.0 (6)
C6—N—C5—C8−1.1 (5)N—C5—C8—C1−179.5 (3)
C9—N—C5—C8177.4 (4)C4—C5—C8—C7−177.5 (4)
C5—N—C6—O1179.5 (4)N—C5—C8—C71.9 (4)
C9—N—C6—O10.9 (7)O2—C7—C8—C1−1.7 (8)
C5—N—C6—C7−0.2 (4)C6—C7—C8—C1179.8 (4)
C9—N—C6—C7−178.7 (4)O2—C7—C8—C5176.6 (4)
O1—C6—C7—O23.0 (7)C6—C7—C8—C5−1.9 (4)
D—H···AD—HH···AD···AD—H···A
C2—H2A···O1i0.932.583.323 (5)137
C3—H3A···O2i0.932.503.424 (5)170
C9—H9A···O10.962.562.915 (5)102
C9—H9A···O2ii0.962.603.198 (5)121
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2A⋯O1i0.932.583.323 (5)137
C3—H3A⋯O2i0.932.503.424 (5)170
C9—H9A⋯O2ii0.962.603.198 (5)121

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  1-Benzyl-6-chloro-indoline-2,3-dione.

Authors:  Hua-Quan Liu; Dong-Mei Fan; De-Cai Wang; Ping-Kai Ou-Yang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-25

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.