Literature DB >> 22199748

N,N'-Bis(2-amino-benz-yl)ethane-1,2-diaminium bis-(4-methyl-benzene-sulfonate).

Luis Ángel Garza Rodríguez, Sylvain Bernès, Perla Elizondo Martínez, Blanca Nájera Martínez, Sara L Rodríguez de Luna.   

Abstract

The title salt, C(16)H(24)N(4) (2+)·2C(7)H(7)O(3)S(-), crystallizes with the dication situated on an inversion center and the anion in a general position. The cation contains two ammonium and two free amine groups, and the observed conformation for the chain linking the benzene rings is different from that found in the free tetra-amine and in the fully protonated tetra-amine. All amine and ammonium H atoms of the cation form hydrogen bonds with eight symmetry-related anions, using the sulfonate O atoms as acceptors. This arrangement for the ions precludes any π-π contacts between benzene rings in the crystal.

Entities:  

Year:  2011        PMID: 22199748      PMCID: PMC3238895          DOI: 10.1107/S1600536811045879

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For reviews on applications of macrocyclic systems, see: Vigato & Tamburini (2004 ▶); Radecka-Paryzek et al. (2005 ▶). For their acid-catalysed synthesis using p-toluene­sulfonic acid, see: Ionkin et al. (2008 ▶). For the structures of the free mol­ecule and the fully protonated cation corresponding to the title cation, see: Rodríguez de Barbarín et al. (2007 ▶) and Garza Rodríguez et al. (2009 ▶, 2011 ▶), respectively.

Experimental

Crystal data

C16H24N4 2+·2C7H7O3S− M = 614.76 Triclinic, a = 5.753 (2) Å b = 9.512 (3) Å c = 14.493 (5) Å α = 101.40 (2)° β = 100.06 (3)° γ = 97.80 (3)° V = 753.6 (5) Å3 Z = 1 Mo Kα radiation μ = 0.23 mm−1 T = 298 K 0.60 × 0.16 × 0.16 mm

Data collection

Siemens P4 diffractometer Absorption correction: ψ scan (XSCANS; Siemens, 1996 ▶) T min = 0.512, T max = 0.594 3505 measured reflections 2650 independent reflections 2234 reflections with I > 2σ(I) R int = 0.091 2 standard reflections every 98 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.162 S = 1.29 2650 reflections 204 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.39 e Å−3 Δρmin = −0.34 e Å−3 Data collection: XSCANS (Siemens, 1996 ▶); cell refinement: XSCANS; data reduction: XSCANS; program(s) used to solve structure: SHELXTL-Plus (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL-Plus; molecular graphics: SHELXTL-Plus and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXTL-Plus. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811045879/fj2471sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811045879/fj2471Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811045879/fj2471Isup3.mol Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H24N42+·2C7H7O3SZ = 1
Mr = 614.76F(000) = 326
Triclinic, P1Dx = 1.355 Mg m3
Hall symbol: -P 1Melting point: 458 K
a = 5.753 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.512 (3) ÅCell parameters from 53 reflections
c = 14.493 (5) Åθ = 4.8–12.3°
α = 101.40 (2)°µ = 0.23 mm1
β = 100.06 (3)°T = 298 K
γ = 97.80 (3)°Needle, colourless
V = 753.6 (5) Å30.60 × 0.16 × 0.16 mm
Siemens P4 diffractometer2234 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.091
graphiteθmax = 25.1°, θmin = 2.2°
2θ/ω scansh = −6→1
Absorption correction: ψ scan (XSCANS; Siemens, 1996)k = −11→11
Tmin = 0.512, Tmax = 0.594l = −17→17
3505 measured reflections2 standard reflections every 98 reflections
2650 independent reflections intensity decay: 1%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.056H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.162w = 1/[σ2(Fo2) + (0.0785P)2 + 0.0881P] where P = (Fo2 + 2Fc2)/3
S = 1.29(Δ/σ)max = 0.001
2650 reflectionsΔρmax = 0.39 e Å3
204 parametersΔρmin = −0.34 e Å3
4 restraintsExtinction correction: SHELXTL-Plus (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 constraintsExtinction coefficient: 0.098 (15)
Primary atom site location: structure-invariant direct methods
xyzUiso*/Ueq
N10.3160 (5)0.8765 (2)0.87317 (17)0.0649 (6)
H110.204 (5)0.933 (3)0.867 (3)0.097*
H120.457 (4)0.939 (3)0.897 (2)0.097*
C10.3118 (4)0.7634 (3)0.79652 (17)0.0496 (5)
C20.1190 (5)0.7221 (3)0.71864 (19)0.0593 (6)
H2A−0.00570.77490.71660.071*
C30.1086 (6)0.6054 (3)0.6448 (2)0.0688 (7)
H3A−0.02350.57930.59390.083*
C40.2906 (6)0.5270 (3)0.6453 (2)0.0716 (8)
H4A0.28500.44870.59450.086*
C50.4818 (5)0.5656 (3)0.72205 (19)0.0618 (7)
H5A0.60570.51210.72270.074*
C60.4955 (4)0.6815 (2)0.79821 (17)0.0500 (6)
C70.6967 (4)0.7159 (3)0.88352 (18)0.0569 (6)
H7A0.76040.81950.89900.068*
H7B0.82400.66420.86790.068*
N80.6196 (3)0.6745 (2)0.96988 (14)0.0498 (5)
H810.524 (5)0.733 (3)0.995 (2)0.075*
H820.749 (3)0.700 (3)1.0198 (15)0.075*
C90.5193 (5)0.5189 (3)0.95362 (18)0.0566 (6)
H9A0.62820.46080.92700.068*
H9B0.36780.49630.90750.068*
S10.81511 (10)0.18163 (7)0.85656 (4)0.0543 (3)
O10.9816 (4)0.3162 (3)0.89311 (16)0.0927 (8)
O20.9253 (5)0.0558 (3)0.85049 (17)0.0967 (8)
O30.6275 (4)0.1732 (3)0.90879 (14)0.0786 (6)
C100.6800 (4)0.1845 (2)0.73869 (17)0.0488 (6)
C110.8130 (5)0.2400 (3)0.67923 (18)0.0572 (6)
H11A0.97440.28000.70230.069*
C120.7067 (5)0.2359 (3)0.5859 (2)0.0647 (7)
H12A0.79880.27320.54670.078*
C130.4679 (5)0.1784 (3)0.54872 (19)0.0587 (6)
C140.3383 (5)0.1247 (3)0.6094 (2)0.0640 (7)
H14A0.17660.08520.58630.077*
C150.4404 (4)0.1275 (3)0.70353 (19)0.0580 (6)
H15A0.34780.09110.74300.070*
C160.3535 (6)0.1760 (4)0.4471 (2)0.0793 (9)
H16A0.39560.27030.43410.119*
H16B0.18240.15180.43840.119*
H16C0.40920.10450.40370.119*
U11U22U33U12U13U23
N10.0860 (16)0.0610 (14)0.0559 (13)0.0284 (12)0.0228 (12)0.0149 (11)
C10.0595 (13)0.0503 (12)0.0476 (13)0.0149 (10)0.0192 (10)0.0202 (10)
C20.0606 (14)0.0688 (16)0.0572 (15)0.0215 (12)0.0131 (11)0.0270 (13)
C30.0760 (17)0.0695 (17)0.0579 (16)0.0132 (14)0.0021 (13)0.0175 (13)
C40.098 (2)0.0614 (16)0.0552 (16)0.0206 (15)0.0156 (15)0.0083 (13)
C50.0751 (16)0.0615 (15)0.0611 (16)0.0279 (13)0.0250 (13)0.0220 (12)
C60.0559 (13)0.0521 (13)0.0514 (13)0.0148 (10)0.0186 (10)0.0236 (10)
C70.0516 (13)0.0674 (15)0.0587 (15)0.0095 (11)0.0165 (11)0.0266 (12)
N80.0484 (10)0.0550 (11)0.0495 (12)0.0109 (8)0.0114 (8)0.0177 (9)
C90.0661 (14)0.0558 (14)0.0510 (14)0.0082 (11)0.0143 (11)0.0189 (11)
S10.0529 (4)0.0600 (4)0.0533 (4)0.0159 (3)0.0100 (3)0.0175 (3)
O10.0863 (14)0.0916 (16)0.0797 (15)−0.0221 (12)−0.0219 (11)0.0317 (12)
O20.1200 (19)0.1028 (18)0.0909 (16)0.0728 (16)0.0241 (14)0.0392 (14)
O30.0748 (12)0.1109 (17)0.0519 (11)0.0177 (12)0.0235 (9)0.0130 (10)
C100.0497 (12)0.0487 (12)0.0517 (13)0.0177 (10)0.0141 (10)0.0112 (10)
C110.0548 (13)0.0621 (15)0.0584 (15)0.0122 (11)0.0178 (11)0.0156 (11)
C120.0761 (17)0.0680 (16)0.0573 (16)0.0164 (13)0.0224 (13)0.0215 (13)
C130.0716 (16)0.0553 (14)0.0526 (14)0.0250 (12)0.0104 (12)0.0130 (11)
C140.0554 (14)0.0754 (17)0.0600 (16)0.0168 (12)0.0056 (11)0.0148 (13)
C150.0511 (13)0.0703 (16)0.0576 (15)0.0143 (11)0.0152 (11)0.0201 (12)
C160.105 (2)0.0776 (19)0.0568 (17)0.0340 (18)0.0050 (16)0.0165 (14)
N1—C11.380 (3)C9—H9A0.9700
N1—H110.896 (10)C9—H9B0.9700
N1—H120.907 (10)S1—O21.423 (2)
C1—C21.388 (4)S1—O31.425 (2)
C1—C61.395 (3)S1—O11.435 (2)
C2—C31.367 (4)S1—C101.756 (3)
C2—H2A0.9300C10—C151.377 (4)
C3—C41.365 (4)C10—C111.381 (3)
C3—H3A0.9300C11—C121.374 (4)
C4—C51.373 (4)C11—H11A0.9300
C4—H4A0.9300C12—C131.378 (4)
C5—C61.380 (4)C12—H12A0.9300
C5—H5A0.9300C13—C141.376 (4)
C6—C71.487 (4)C13—C161.500 (4)
C7—N81.503 (3)C14—C151.381 (4)
C7—H7A0.9700C14—H14A0.9300
C7—H7B0.9700C15—H15A0.9300
N8—C91.471 (3)C16—H16A0.9600
N8—H810.905 (10)C16—H16B0.9600
N8—H820.912 (10)C16—H16C0.9600
C9—C9i1.503 (5)
C1—N1—H11118 (2)C9i—C9—H9A109.6
C1—N1—H12117 (2)N8—C9—H9B109.6
H11—N1—H12105 (3)C9i—C9—H9B109.6
N1—C1—C2121.3 (2)H9A—C9—H9B108.1
N1—C1—C6120.5 (2)O2—S1—O3111.59 (15)
C2—C1—C6118.1 (2)O2—S1—O1113.75 (17)
C3—C2—C1121.5 (2)O3—S1—O1111.44 (16)
C3—C2—H2A119.3O2—S1—C10107.00 (13)
C1—C2—H2A119.3O3—S1—C10106.50 (12)
C4—C3—C2120.5 (3)O1—S1—C10106.03 (12)
C4—C3—H3A119.7C15—C10—C11119.1 (2)
C2—C3—H3A119.7C15—C10—S1120.15 (19)
C3—C4—C5118.8 (3)C11—C10—S1120.71 (19)
C3—C4—H4A120.6C12—C11—C10120.0 (3)
C5—C4—H4A120.6C12—C11—H11A120.0
C4—C5—C6121.9 (2)C10—C11—H11A120.0
C4—C5—H5A119.1C11—C12—C13122.1 (3)
C6—C5—H5A119.1C11—C12—H12A119.0
C5—C6—C1119.1 (2)C13—C12—H12A119.0
C5—C6—C7121.1 (2)C12—C13—C14117.0 (3)
C1—C6—C7119.7 (2)C12—C13—C16121.5 (3)
C6—C7—N8112.20 (19)C14—C13—C16121.4 (3)
C6—C7—H7A109.2C13—C14—C15122.1 (3)
N8—C7—H7A109.2C13—C14—H14A118.9
C6—C7—H7B109.2C15—C14—H14A118.9
N8—C7—H7B109.2C10—C15—C14119.7 (2)
H7A—C7—H7B107.9C10—C15—H15A120.2
C9—N8—C7113.4 (2)C14—C15—H15A120.2
C9—N8—H81113 (2)C13—C16—H16A109.5
C7—N8—H81112.8 (19)C13—C16—H16B109.5
C9—N8—H82110.1 (19)H16A—C16—H16B109.5
C7—N8—H82108.0 (19)C13—C16—H16C109.5
H81—N8—H8299 (3)H16A—C16—H16C109.5
N8—C9—C9i110.5 (3)H16B—C16—H16C109.5
N8—C9—H9A109.6
N1—C1—C2—C3−176.7 (2)O3—S1—C10—C15−23.7 (2)
C6—C1—C2—C3−0.6 (4)O1—S1—C10—C15−142.5 (2)
C1—C2—C3—C4−0.8 (4)O2—S1—C10—C11−82.4 (2)
C2—C3—C4—C51.2 (4)O3—S1—C10—C11158.2 (2)
C3—C4—C5—C6−0.3 (4)O1—S1—C10—C1139.4 (2)
C4—C5—C6—C1−1.1 (4)C15—C10—C11—C12−0.9 (4)
C4—C5—C6—C7176.1 (2)S1—C10—C11—C12177.31 (19)
N1—C1—C6—C5177.6 (2)C10—C11—C12—C130.3 (4)
C2—C1—C6—C51.5 (3)C11—C12—C13—C140.1 (4)
N1—C1—C6—C70.3 (3)C11—C12—C13—C16179.3 (2)
C2—C1—C6—C7−175.8 (2)C12—C13—C14—C150.0 (4)
C5—C6—C7—N8−106.2 (3)C16—C13—C14—C15−179.3 (2)
C1—C6—C7—N871.0 (3)C11—C10—C15—C141.0 (4)
C6—C7—N8—C958.7 (3)S1—C10—C15—C14−177.23 (19)
C7—N8—C9—C9i171.5 (2)C13—C14—C15—C10−0.5 (4)
O2—S1—C10—C1595.8 (2)
D—H···AD—HH···AD···AD—H···A
N1—H11···O2ii0.90 (1)2.12 (1)3.012 (3)177 (3)
N1—H12···O3iii0.91 (1)2.27 (3)3.028 (4)141 (3)
N8—H81···O3i0.91 (1)1.91 (2)2.763 (3)157 (3)
N8—H82···O1iv0.91 (1)1.86 (1)2.739 (3)160 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H11⋯O2i0.90 (1)2.12 (1)3.012 (3)177 (3)
N1—H12⋯O3ii0.91 (1)2.27 (3)3.028 (4)141 (3)
N8—H81⋯O3iii0.91 (1)1.91 (2)2.763 (3)157 (3)
N8—H82⋯O1iv0.91 (1)1.86 (1)2.739 (3)160 (3)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  N,N'-Bis(2-ammonio-benz-yl)ethane-1,2-diammonium-nitrate-perchlorate (1/1.5/2.5).

Authors:  Luis Angel Garza Rodríguez; Sylvain Bernès; Blanca Nájera Martínez; Perla Elizondo Martínez; Nancy Pérez Rodríguez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-04

3.  N,N'-Bis(2-aza-niumylbenz-yl)ethane-1,2-diaminium tetra-chloride.

Authors:  Luis Ángel Garza Rodríguez; Sylvain Bernès; Perla Elizondo Martínez; Blanca Nájera Martínez; Nancy Pérez Rodríguez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-09
  3 in total
  2 in total

1.  N,N'-Bis(2-aza-niumylbenz-yl)ethane-1,2-diaminium tetra-chloride.

Authors:  Luis Ángel Garza Rodríguez; Sylvain Bernès; Perla Elizondo Martínez; Blanca Nájera Martínez; Nancy Pérez Rodríguez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-09

2.  N,N'-Bis(2-amino-benz-yl)ethane-1,2-diaminium dinitrate.

Authors:  Luis Ángel Garza Rodríguez; Perla Elizondo Martínez; Sylvain Bernès; Blanca Nájera Martínez; Nancy Pérez Rodríguez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-10-16
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.