Literature DB >> 21578735

N,N'-Bis(2-ammonio-benz-yl)ethane-1,2-diammonium-nitrate-perchlorate (1/1.5/2.5).

Luis Angel Garza Rodríguez, Sylvain Bernès, Blanca Nájera Martínez, Perla Elizondo Martínez, Nancy Pérez Rodríguez.   

Abstract

The title compound, C(16)H(26)N(4) (4+)·2.5ClO(4) (-)·1.5NO(3) (-), is an organic salt in which the cation is a fully protonated tetra-mine. The cation lies on an inversion center and, as a consequence, both benzene rings are parallel. The central chain is found in an all-trans arrangement, a conformation different from that observed in the crystal structure of the non-protonated mol-ecule. The charges are balanced by a mixture of nitrate and perchlorate ions. One site is occupied by an ordered perchlorate ion, while the other contains both nitrate and perchlorate ions, with occupancies of 0.75 and 0.25, respectively. In the crystal, the NH(2) (+) groups of the cation form N-H⋯O hydrogen bonds with the anions. The NH(3) (+) groups also behave as donor groups, allowing the building of chains along [100], alternating cations and disordered anions being connected via N-H⋯O hydrogen bonds.

Entities:  

Year:  2009        PMID: 21578735      PMCID: PMC2972165          DOI: 10.1107/S160053680904519X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of the free tetra­mine, see: Rodríguez de Barbarín et al. (2007 ▶). For the use of polyaza ligands for depolymerization of poly(ethyl­ene terephthalate), see: Carta et al. (2003 ▶); Parra et al. (2004 ▶); Pohorely et al. (2006 ▶).

Experimental

Crystal data

C16H26N4 4+·2.5ClO4 −·1.5NO3 − M = 616.05 Monoclinic, a = 8.427 (3) Å b = 12.637 (3) Å c = 11.834 (3) Å β = 106.97 (2)° V = 1205.4 (6) Å3 Z = 2 Mo Kα radiation μ = 0.41 mm−1 T = 298 K 0.6 × 0.4 × 0.4 mm

Data collection

Siemens P4 diffractometer Absorption correction: none 6392 measured reflections 2125 independent reflections 1757 reflections with I > 2σ(I) R int = 0.057 3 standard reflections every 97 reflections intensity decay: <1%

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.119 S = 1.14 2125 reflections 218 parameters 8 restraints H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.27 e Å−3 Data collection: XSCANS (Siemens, 1996 ▶); cell refinement: XSCANS; data reduction: XSCANS; program(s) used to solve structure: SHELXTL-Plus (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL-Plus; molecular graphics: SHELXTL-Plus and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXTL-Plus. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680904519X/vm2008sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680904519X/vm2008Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H26N44+·2.5ClO4·1.5NO3F(000) = 638
Mr = 616.05Dx = 1.697 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 73 reflections
a = 8.427 (3) Åθ = 5.0–12.4°
b = 12.637 (3) ŵ = 0.41 mm1
c = 11.834 (3) ÅT = 298 K
β = 106.97 (2)°Irregular, pale yellow
V = 1205.4 (6) Å30.6 × 0.4 × 0.4 mm
Z = 2
Siemens P4 diffractometerRint = 0.057
Radiation source: fine-focus sealed tubeθmax = 25.1°, θmin = 2.4°
graphiteh = −10→10
ω scansk = −15→15
6392 measured reflectionsl = −14→14
2125 independent reflections3 standard reflections every 97 reflections
1757 reflections with I > 2σ(I) intensity decay: <1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.050Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.119H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0221P)2 + 1.6735P] where P = (Fo2 + 2Fc2)/3
2125 reflections(Δ/σ)max < 0.001
218 parametersΔρmax = 0.25 e Å3
8 restraintsΔρmin = −0.27 e Å3
0 constraints
xyzUiso*/UeqOcc. (<1)
N1−0.1084 (4)0.6532 (2)0.2742 (2)0.0430 (7)
H1A−0.20900.62420.25380.065*
H1B−0.11630.72150.28970.065*
H1C−0.04450.62080.33810.065*
C2−0.0347 (4)0.6416 (2)0.1763 (3)0.0326 (7)
C3−0.1440 (4)0.6359 (2)0.0652 (3)0.0399 (8)
H3A−0.25780.63710.05460.048*
C4−0.0826 (5)0.6283 (2)−0.0310 (3)0.0434 (8)
H4A−0.15530.6235−0.10700.052*
C50.0852 (5)0.6280 (3)−0.0143 (3)0.0430 (8)
H5A0.12630.6245−0.07910.052*
C60.1929 (4)0.6327 (2)0.0979 (3)0.0394 (8)
H6A0.30660.63130.10820.047*
C70.1348 (4)0.6396 (2)0.1969 (3)0.0311 (7)
C80.2604 (4)0.6487 (2)0.3159 (3)0.0371 (7)
H8A0.20950.68340.36960.044*
H8B0.35130.69280.30910.044*
N90.3283 (3)0.5437 (2)0.3671 (2)0.0350 (6)
H9A0.24570.50530.38060.042*
H9B0.36600.50850.31400.042*
C100.4644 (4)0.5534 (3)0.4787 (3)0.0380 (8)
H10A0.42250.58620.53840.046*
H10B0.55090.59850.46620.046*
Cl1−0.00237 (10)0.35712 (6)0.40133 (7)0.0396 (2)
O1−0.1221 (4)0.3829 (3)0.4604 (3)0.0752 (9)
O20.0116 (4)0.4419 (2)0.3253 (2)0.0643 (8)
O30.1540 (4)0.3438 (2)0.4887 (2)0.0648 (8)
O4−0.0495 (4)0.2635 (2)0.3332 (3)0.0647 (8)
Cl20.5512 (9)0.4371 (6)0.1804 (8)0.0358 (15)0.25
O50.587 (4)0.5336 (15)0.244 (2)0.039 (7)0.25
O60.5011 (19)0.4701 (12)0.0603 (8)0.083 (4)0.25
O70.415 (4)0.394 (4)0.211 (4)0.083 (14)0.25
O80.675 (2)0.3628 (14)0.186 (2)0.052 (5)0.25
N110.5525 (14)0.4327 (9)0.2076 (9)0.068 (4)0.75
O120.5925 (19)0.5250 (7)0.2380 (11)0.071 (4)0.75
O130.4469 (14)0.3860 (9)0.2416 (13)0.056 (2)0.75
O140.6277 (12)0.3811 (8)0.1526 (9)0.099 (3)0.75
U11U22U33U12U13U23
N10.0417 (16)0.0511 (17)0.0434 (15)0.0065 (14)0.0236 (13)0.0043 (13)
C20.0406 (18)0.0254 (14)0.0364 (16)0.0035 (13)0.0186 (14)0.0037 (13)
C30.0373 (18)0.0331 (16)0.0472 (19)0.0030 (14)0.0089 (15)0.0045 (15)
C40.062 (2)0.0306 (16)0.0344 (17)0.0060 (16)0.0086 (16)0.0029 (14)
C50.065 (3)0.0361 (18)0.0336 (17)0.0020 (17)0.0231 (17)0.0038 (14)
C60.0451 (19)0.0333 (16)0.0475 (18)−0.0014 (15)0.0255 (16)0.0056 (15)
C70.0393 (18)0.0221 (14)0.0347 (15)−0.0016 (13)0.0153 (13)0.0033 (12)
C80.0392 (18)0.0305 (16)0.0421 (17)−0.0037 (14)0.0128 (15)−0.0009 (14)
N90.0333 (15)0.0368 (14)0.0337 (13)−0.0012 (11)0.0081 (12)−0.0022 (11)
C100.0333 (18)0.0418 (18)0.0355 (17)−0.0007 (14)0.0047 (14)−0.0050 (14)
Cl10.0461 (5)0.0334 (4)0.0467 (5)−0.0010 (4)0.0250 (4)0.0020 (3)
O10.069 (2)0.088 (2)0.089 (2)0.0045 (17)0.0545 (18)−0.0055 (18)
O20.084 (2)0.0519 (16)0.0603 (16)−0.0161 (15)0.0263 (15)0.0158 (13)
O30.0577 (18)0.0691 (18)0.0606 (16)0.0068 (15)0.0065 (14)−0.0013 (14)
O40.0669 (19)0.0407 (14)0.086 (2)−0.0074 (13)0.0213 (16)−0.0149 (14)
Cl20.028 (3)0.033 (3)0.051 (3)−0.006 (2)0.018 (2)−0.007 (2)
O50.039 (13)0.049 (16)0.039 (9)0.007 (10)0.026 (9)0.002 (9)
O60.105 (11)0.110 (10)0.037 (6)−0.004 (9)0.027 (7)0.017 (7)
O70.059 (14)0.12 (2)0.08 (3)−0.036 (15)0.030 (17)−0.020 (16)
O80.029 (7)0.032 (6)0.094 (12)0.010 (6)0.019 (7)−0.005 (7)
N110.070 (6)0.079 (7)0.060 (6)0.024 (5)0.026 (4)−0.002 (4)
O120.082 (8)0.029 (4)0.118 (7)−0.005 (4)0.055 (6)−0.006 (4)
O130.060 (5)0.052 (3)0.062 (6)−0.016 (3)0.028 (5)−0.003 (3)
O140.104 (7)0.097 (5)0.122 (8)0.031 (4)0.075 (6)−0.015 (5)
N1—C21.473 (4)N9—C101.480 (4)
N1—H1A0.8900N9—H9A0.9000
N1—H1B0.8900N9—H9B0.9000
N1—H1C0.8900C10—C10i1.503 (6)
C2—C31.369 (4)C10—H10A0.9700
C2—C71.378 (4)C10—H10B0.9700
C3—C41.385 (5)Cl1—O41.421 (3)
C3—H3A0.9300Cl1—O11.423 (3)
C4—C51.369 (5)Cl1—O21.426 (3)
C4—H4A0.9300Cl1—O31.428 (3)
C5—C61.374 (5)Cl2—O81.389 (9)
C5—H5A0.9300Cl2—O71.409 (10)
C6—C71.398 (4)Cl2—O51.417 (10)
C6—H6A0.9300Cl2—O61.422 (9)
C7—C81.498 (4)N11—O141.222 (8)
C8—N91.501 (4)N11—O131.229 (8)
C8—H8A0.9700N11—O121.238 (8)
C8—H8B0.9700
C2—N1—H1A109.5H8A—C8—H8B107.8
C2—N1—H1B109.5C10—N9—C8113.1 (2)
H1A—N1—H1B109.5C10—N9—H9A109.0
C2—N1—H1C109.5C8—N9—H9A109.0
H1A—N1—H1C109.5C10—N9—H9B109.0
H1B—N1—H1C109.5C8—N9—H9B109.0
C3—C2—C7122.8 (3)H9A—N9—H9B107.8
C3—C2—N1116.1 (3)N9—C10—C10i110.7 (3)
C7—C2—N1121.0 (3)N9—C10—H10A109.5
C2—C3—C4119.0 (3)C10i—C10—H10A109.5
C2—C3—H3A120.5N9—C10—H10B109.5
C4—C3—H3A120.5C10i—C10—H10B109.5
C5—C4—C3120.0 (3)H10A—C10—H10B108.1
C5—C4—H4A120.0O4—Cl1—O1110.36 (19)
C3—C4—H4A120.0O4—Cl1—O2109.21 (17)
C4—C5—C6120.2 (3)O1—Cl1—O2109.82 (19)
C4—C5—H5A119.9O4—Cl1—O3111.00 (17)
C6—C5—H5A119.9O1—Cl1—O3107.96 (19)
C5—C6—C7121.2 (3)O2—Cl1—O3108.46 (19)
C5—C6—H6A119.4O8—Cl2—O7112 (2)
C7—C6—H6A119.4O8—Cl2—O5121.0 (17)
C2—C7—C6116.8 (3)O7—Cl2—O5105 (3)
C2—C7—C8125.2 (3)O8—Cl2—O6104.3 (13)
C6—C7—C8117.9 (3)O7—Cl2—O6110 (2)
C7—C8—N9113.2 (2)O5—Cl2—O6103.4 (13)
C7—C8—H8A108.9O14—N11—O13117.1 (12)
N9—C8—H8A108.9O14—N11—O12121.2 (12)
C7—C8—H8B108.9O13—N11—O12121.3 (12)
N9—C8—H8B108.9
C7—C2—C3—C4−0.3 (5)C5—C6—C7—C2−0.1 (4)
N1—C2—C3—C4178.0 (3)C5—C6—C7—C8−177.7 (3)
C2—C3—C4—C5−0.8 (5)C2—C7—C8—N998.7 (3)
C3—C4—C5—C61.5 (5)C6—C7—C8—N9−83.9 (3)
C4—C5—C6—C7−1.0 (5)C7—C8—N9—C10174.1 (3)
C3—C2—C7—C60.7 (4)C8—N9—C10—C10i−175.9 (3)
N1—C2—C7—C6−177.5 (3)O8—Cl2—O6—O6ii−79 (5)
C3—C2—C7—C8178.2 (3)O7—Cl2—O6—O6ii160 (6)
N1—C2—C7—C8−0.1 (4)O5—Cl2—O6—O6ii48 (6)
D—H···AD—HH···AD···AD—H···A
N1—H1C···O20.892.322.856 (4)118
N1—H1B···O13iii0.892.613.270 (13)132
N9—H9B···O50.902.272.96 (3)133
N9—H9B···O120.902.353.055 (15)136
N9—H9A···O20.902.052.872 (4)151
N9—H9A···O30.902.643.441 (4)149
N9—H9B···O70.902.022.89 (5)163
N9—H9B···O130.901.982.836 (13)157
N1—H1A···O5iv0.892.042.91 (3)165
N1—H1A···O12iv0.892.052.920 (13)164
N1—H1B···O8iii0.891.902.78 (2)170
N1—H1B···O14iii0.892.143.026 (11)174
N1—H1C···O1v0.892.393.207 (4)153
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N9—H9A⋯O20.902.052.872 (4)151
N9—H9B⋯O70.902.022.89 (5)163
N9—H9B⋯O130.901.982.836 (13)157
N1—H1A⋯O5i 0.892.042.91 (3)165
N1—H1A⋯O12i 0.892.052.920 (13)164
N1—H1B⋯O8ii 0.891.902.78 (2)170
N1—H1B⋯O14ii 0.892.143.026 (11)174
N1—H1C⋯O1iii 0.892.393.207 (4)153

Symmetry codes: (i) ; (ii) ; (iii) .

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  2 in total
  2 in total

1.  N,N'-Bis(2-aza-niumylbenz-yl)ethane-1,2-diaminium tetra-chloride.

Authors:  Luis Ángel Garza Rodríguez; Sylvain Bernès; Perla Elizondo Martínez; Blanca Nájera Martínez; Nancy Pérez Rodríguez
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-09

2.  N,N'-Bis(2-amino-benz-yl)ethane-1,2-diaminium bis-(4-methyl-benzene-sulfonate).

Authors:  Luis Ángel Garza Rodríguez; Sylvain Bernès; Perla Elizondo Martínez; Blanca Nájera Martínez; Sara L Rodríguez de Luna
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-09
  2 in total

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