Literature DB >> 22198283

Allostery and cooperativity in Escherichia coli aspartate transcarbamoylase.

Evan R Kantrowitz1.   

Abstract

The allosteric enzyme aspartate transcarbamoylase (ATCase) from Escherichia coli has been the subject of investigations for approximately 50 years. This enzyme controls the rate of pyrimidine nucleotide biosynthesis by feedback inhibition, and helps to balance the pyrimidine and purine pools by competitive allosteric activation by ATP. The catalytic and regulatory components of the dodecameric enzyme can be separated and studied independently. Many of the properties of the enzyme follow the Monod, Wyman Changeux model of allosteric control thus E. coli ATCase has become the textbook example. This review will highlight kinetic, biophysical, and structural studies which have provided a molecular level understanding of how the allosteric nature of this enzyme regulates pyrimidine nucleotide biosynthesis. Copyright Â
© 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 22198283      PMCID: PMC3393099          DOI: 10.1016/j.abb.2011.10.024

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  78 in total

1.  Binding of bisubstrate analog promotes large structural changes in the unregulated catalytic trimer of aspartate transcarbamoylase: implications for allosteric regulation.

Authors:  J A Endrizzi; P T Beernink; T Alber; H K Schachman
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-09       Impact factor: 11.205

2.  Direct observation in solution of a preexisting structural equilibrium for a mutant of the allosteric aspartate transcarbamoylase.

Authors:  Luc Fetler; Evan R Kantrowitz; Patrice Vachette
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-03       Impact factor: 11.205

3.  Heterotropic effectors promote a global conformational change in aspartate transcarbamoylase.

Authors:  E Eisenstein; D W Markby; H K Schachman
Journal:  Biochemistry       Date:  1990-04-17       Impact factor: 3.162

4.  Asymmetry of binding and physical assignments of CTP and ATP sites in aspartate transcarbamoylase.

Authors:  P Suter; J P Rosenbusch
Journal:  J Biol Chem       Date:  1977-11-25       Impact factor: 5.157

5.  Ordered substrate binding and evidence for a thermally induced change in mechanism for E. coli aspartate transcarbamylase.

Authors:  F C Wedler; F J Gasser
Journal:  Arch Biochem Biophys       Date:  1974-07       Impact factor: 4.013

6.  Crystallographic determination of symmetry of aspartate transcarbamylase.

Authors:  D C Wiley; W N Lipscomb
Journal:  Nature       Date:  1968-06-22       Impact factor: 49.962

7.  Crystal and molecular structures of native and CTP-liganded aspartate carbamoyltransferase from Escherichia coli.

Authors:  R B Honzatko; J L Crawford; H L Monaco; J E Ladner; B F Ewards; D R Evans; S G Warren; D C Wiley; R C Ladner; W N Lipscomb
Journal:  J Mol Biol       Date:  1982-09-15       Impact factor: 5.469

8.  The regulatory subunit of Escherichia coli aspartate carbamoyltransferase may influence homotropic cooperativity and heterotropic interactions by a direct interaction with the loop containing residues 230-245 of the catalytic chain.

Authors:  C J Newton; E R Kantrowitz
Journal:  Proc Natl Acad Sci U S A       Date:  1990-03       Impact factor: 11.205

9.  Products in the T-state of aspartate transcarbamylase: crystal structure of the phosphate and N-carbamyl-L-aspartate ligated enzyme.

Authors:  Jingwei Huang; William N Lipscomb
Journal:  Biochemistry       Date:  2004-06-01       Impact factor: 3.162

10.  In the presence of CTP, UTP becomes an allosteric inhibitor of aspartate transcarbamoylase.

Authors:  J R Wild; S J Loughrey-Chen; T S Corder
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

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  19 in total

1.  A second allosteric site in Escherichia coli aspartate transcarbamoylase.

Authors:  Alexis W Peterson; Gregory M Cockrell; Evan R Kantrowitz
Journal:  Biochemistry       Date:  2012-06-06       Impact factor: 3.162

Review 2.  Solution NMR Spectroscopy for the Study of Enzyme Allostery.

Authors:  George P Lisi; J Patrick Loria
Journal:  Chem Rev       Date:  2016-01-06       Impact factor: 60.622

3.  Expression, purification, crystallization and preliminary X-ray diffraction analysis of the aspartate transcarbamoylase domain of human CAD.

Authors:  Alba Ruiz-Ramos; Nada Lallous; Araceli Grande-García; Santiago Ramón-Maiques
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-11-29

4.  Allostery and substrate channeling in the tryptophan synthase bienzyme complex: evidence for two subunit conformations and four quaternary states.

Authors:  Dimitri Niks; Eduardo Hilario; Adam Dierkers; Huu Ngo; Dan Borchardt; Thomas J Neubauer; Li Fan; Leonard J Mueller; Michael F Dunn
Journal:  Biochemistry       Date:  2013-09-06       Impact factor: 3.162

Review 5.  50 years of allosteric interactions: the twists and turns of the models.

Authors:  Jean-Pierre Changeux
Journal:  Nat Rev Mol Cell Biol       Date:  2013-10-23       Impact factor: 94.444

Review 6.  X-ray Scattering Studies of Protein Structural Dynamics.

Authors:  Steve P Meisburger; William C Thomas; Maxwell B Watkins; Nozomi Ando
Journal:  Chem Rev       Date:  2017-05-30       Impact factor: 60.622

Review 7.  The role of small-angle scattering in structure-based screening applications.

Authors:  Po-Chia Chen; Janosch Hennig
Journal:  Biophys Rev       Date:  2018-10-10

8.  Nanosecond-Timescale Dynamics and Conformational Heterogeneity in Human GCK Regulation and Disease.

Authors:  Shawn M Sternisha; A Carl Whittington; Juliana A Martinez Fiesco; Carol Porter; Malcolm M McCray; Timothy Logan; Cristina Olivieri; Gianluigi Veglia; Peter J Steinbach; Brian G Miller
Journal:  Biophys J       Date:  2020-01-14       Impact factor: 4.033

9.  ViewMotions Rainbow: a new method to illustrate molecular motions in proteins.

Authors:  Gregory M Cockrell; Evan R Kantrowitz
Journal:  J Mol Graph Model       Date:  2013-01-05       Impact factor: 2.518

10.  The role of strong electrostatic interactions at the dimer interface of human glutathione synthetase.

Authors:  Margarita C De Jesus; Brandall L Ingle; Khaldoon A Barakat; Bisesh Shrestha; Kerri D Slavens; Thomas R Cundari; Mary E Anderson
Journal:  Protein J       Date:  2014-10       Impact factor: 2.371

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