Literature DB >> 22193303

Multifunctional protein labeling via enzymatic N-terminal tagging and elaboration by click chemistry.

William P Heal1, Megan H Wright, Emmanuelle Thinon, Edward W Tate.   

Abstract

A protocol for selective and site-specific enzymatic labeling of proteins is described. The method exploits the protein co-/post-translational modification known as myristoylation, the transfer of myristic acid (a 14-carbon saturated fatty acid) to an N-terminal glycine catalyzed by the enzyme myristoyl-CoA:protein N-myristoyltransferase (NMT). Escherichia coli, having no endogenous NMT, is used for the coexpression of both the transferase and the target protein to be labeled, which participate in the in vivo N-terminal attachment of synthetically derived tagged analogs of myristic acid bearing a 'clickable' tag. This tag is a functional group that can undergo bio-orthogonal ligation via 'click' chemistry, for example, an azide, and can be used as a handle for further site-specific labeling in vitro. Here we provide protocols for in vivo N-terminal tagging of recombinant protein, and the synthesis and application of multifunctional reagents that enable protein labeling via click chemistry for affinity purification and detection by fluorescence. In addition to general N-terminal protein labeling, the protocol would be of particular use in providing evidence for native myristoylation of proteins of interest, proof of activity/selectivity of NMTs and cross-species reactivity of NMTs without resorting to the use of radioactive isotopes.

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Year:  2011        PMID: 22193303     DOI: 10.1038/nprot.2011.425

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  40 in total

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Review 2.  Click chemistry and medicinal chemistry: a case of "cyclo-addiction".

Authors:  A D Moorhouse; J E Moses
Journal:  ChemMedChem       Date:  2008-05       Impact factor: 3.466

3.  Extent of N-terminal modifications in cytosolic proteins from eukaryotes.

Authors:  Aude Martinez; José A Traverso; Benoît Valot; Myriam Ferro; Christelle Espagne; Geneviève Ephritikhine; Michel Zivy; Carmela Giglione; Thierry Meinnel
Journal:  Proteomics       Date:  2008-07       Impact factor: 3.984

4.  Myristoyl-CoA:protein N-myristoyltransferase, an essential enzyme and potential drug target in kinetoplastid parasites.

Authors:  Helen P Price; Malini R Menon; Chrysoula Panethymitaki; David Goulding; Paul G McKean; Deborah F Smith
Journal:  J Biol Chem       Date:  2002-12-17       Impact factor: 5.157

5.  Rapid multilabel detection of geranylgeranylated proteins by using bioorthogonal ligation chemistry.

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Journal:  Chembiochem       Date:  2010-04-12       Impact factor: 3.164

6.  Bioorthogonal chemical tagging of protein cholesterylation in living cells.

Authors:  William P Heal; Biljana Jovanovic; Sara Bessin; Megan H Wright; Anthony I Magee; Edward W Tate
Journal:  Chem Commun (Camb)       Date:  2011-01-11       Impact factor: 6.222

Review 7.  The biology and enzymology of eukaryotic protein acylation.

Authors:  D A Towler; J I Gordon; S P Adams; L Glaser
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Review 8.  Chemical glycobiology.

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9.  Imaging activity-dependent regulation of neurexin-neuroligin interactions using trans-synaptic enzymatic biotinylation.

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Journal:  Cell       Date:  2010-10-07       Impact factor: 41.582

Review 10.  Activity-based probes: discovering new biology and new drug targets.

Authors:  William P Heal; T H Tam Dang; Edward W Tate
Journal:  Chem Soc Rev       Date:  2010-10-01       Impact factor: 54.564

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  45 in total

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Authors:  Mohammad Rashidian; Jonathan K Dozier; Mark D Distefano
Journal:  Bioconjug Chem       Date:  2013-08-21       Impact factor: 4.774

Review 2.  Targeting the N terminus for site-selective protein modification.

Authors:  Christian B Rosen; Matthew B Francis
Journal:  Nat Chem Biol       Date:  2017-06-20       Impact factor: 15.040

3.  A Method to Generate and Analyze Modified Myristoylated Proteins.

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Journal:  Chembiochem       Date:  2017-01-03       Impact factor: 3.164

4.  Nonradioactive quantification of autophagic protein degradation with L-azidohomoalanine labeling.

Authors:  Jigang Wang; Jianbin Zhang; Yew Mun Lee; Shukie Ng; Yin Shi; Zi-Chun Hua; Qingsong Lin; Han-Ming Shen
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5.  Chemoenzymatic bio-orthogonal chemistry for site-specific double modification of recombinant thrombomodulin.

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6.  Genetically Encoded Photocleavable Linkers for Patterned Protein Release from Biomaterials.

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Journal:  J Am Chem Soc       Date:  2019-09-17       Impact factor: 15.419

Review 7.  Mechanistic insights into antibiotic action on the ribosome through single-molecule fluorescence imaging.

Authors:  Leyi Wang; Michael R Wasserman; Michael B Feldman; Roger B Altman; Scott C Blanchard
Journal:  Ann N Y Acad Sci       Date:  2011-12       Impact factor: 5.691

8.  Novel Thienopyrimidine Inhibitors of Leishmania N-Myristoyltransferase with On-Target Activity in Intracellular Amastigotes.

Authors:  Andrew S Bell; Zhiyong Yu; Jennie A Hutton; Megan H Wright; James A Brannigan; Daniel Paape; Shirley M Roberts; Charlotte L Sutherell; Markus Ritzefeld; Anthony J Wilkinson; Deborah F Smith; Robin J Leatherbarrow; Edward W Tate
Journal:  J Med Chem       Date:  2020-07-14       Impact factor: 7.446

Review 9.  Exterior design: strategies for redecorating the bacterial surface with small molecules.

Authors:  Samir Gautam; Thomas J Gniadek; Taehan Kim; David A Spiegel
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10.  Development of a Photo-Cross-Linkable Diaminoquinazoline Inhibitor for Target Identification in Plasmodium falciparum.

Authors:  Alexandra S Lubin; Ainoa Rueda-Zubiaurre; Holly Matthews; Hella Baumann; Fabio R Fisher; Julia Morales-Sanfrutos; Kate S Hadavizadeh; Flore Nardella; Edward W Tate; Jake Baum; Artur Scherf; Matthew J Fuchter
Journal:  ACS Infect Dis       Date:  2018-02-05       Impact factor: 5.084

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