Literature DB >> 22184212

Modularity of a carbon-fixing protein organelle.

Walter Bonacci1, Poh K Teng, Bruno Afonso, Henrike Niederholtmeyer, Patricia Grob, Pamela A Silver, David F Savage.   

Abstract

Bacterial microcompartments are proteinaceous complexes that catalyze metabolic pathways in a manner reminiscent of organelles. Although microcompartment structure is well understood, much less is known about their assembly and function in vivo. We show here that carboxysomes, CO(2)-fixing microcompartments encoded by 10 genes, can be heterologously produced in Escherichia coli. Expression of carboxysomes in E. coli resulted in the production of icosahedral complexes similar to those from the native host. In vivo, the complexes were capable of both assembling with carboxysomal proteins and fixing CO(2). Characterization of purified synthetic carboxysomes indicated that they were well formed in structure, contained the expected molecular components, and were capable of fixing CO(2) in vitro. In addition, we verify association of the postulated pore-forming protein CsoS1D with the carboxysome and show how it may modulate function. We have developed a genetic system capable of producing modular carbon-fixing microcompartments in a heterologous host. In doing so, we lay the groundwork for understanding these elaborate protein complexes and for the synthetic biological engineering of self-assembling molecular structures.

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Year:  2011        PMID: 22184212      PMCID: PMC3258634          DOI: 10.1073/pnas.1108557109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

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4.  Transcript analysis of the Halothiobacillus neapolitanus cso operon.

Authors:  Fei Cai; Sabine Heinhorst; Jessup M Shively; Gordon C Cannon
Journal:  Arch Microbiol       Date:  2007-09-27       Impact factor: 2.552

Review 5.  Harnessing nature's toolbox: regulatory elements for synthetic biology.

Authors:  Patrick M Boyle; Pamela A Silver
Journal:  J R Soc Interface       Date:  2009-03-04       Impact factor: 4.118

6.  Despite slow catalysis and confused substrate specificity, all ribulose bisphosphate carboxylases may be nearly perfectly optimized.

Authors:  Guillaume G B Tcherkez; Graham D Farquhar; T John Andrews
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-26       Impact factor: 11.205

7.  An improved spectrophotometric assay for ribulosebisphosphate carboxylase.

Authors:  R M Lilley; D A Walker
Journal:  Biochim Biophys Acta       Date:  1974-07-17

8.  The structure of isolated Synechococcus strain WH8102 carboxysomes as revealed by electron cryotomography.

Authors:  Cristina V Iancu; H Jane Ding; Dylan M Morris; D Prabha Dias; Arlene D Gonzales; Anthony Martino; Grant J Jensen
Journal:  J Mol Biol       Date:  2007-06-29       Impact factor: 5.469

9.  Halothiobacillus neapolitanus carboxysomes sequester heterologous and chimeric RubisCO species.

Authors:  Balaraj B Menon; Zhicheng Dou; Sabine Heinhorst; Jessup M Shively; Gordon C Cannon
Journal:  PLoS One       Date:  2008-10-30       Impact factor: 3.240

10.  Structural analysis of CsoS1A and the protein shell of the Halothiobacillus neapolitanus carboxysome.

Authors:  Yingssu Tsai; Michael R Sawaya; Gordon C Cannon; Fei Cai; Eric B Williams; Sabine Heinhorst; Cheryl A Kerfeld; Todd O Yeates
Journal:  PLoS Biol       Date:  2007-06       Impact factor: 8.029

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  87 in total

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Journal:  Nat Chem Biol       Date:  2012-05-17       Impact factor: 15.040

Review 3.  Engineering synthetic recursive pathways to generate non-natural small molecules.

Authors:  Elizabeth A Felnagle; Asha Chaubey; Elizabeth L Noey; Kendall N Houk; James C Liao
Journal:  Nat Chem Biol       Date:  2012-05-17       Impact factor: 15.040

Review 4.  Functions, compositions, and evolution of the two types of carboxysomes: polyhedral microcompartments that facilitate CO2 fixation in cyanobacteria and some proteobacteria.

Authors:  Benjamin D Rae; Benedict M Long; Murray R Badger; G Dean Price
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

5.  A bioarchitectonic approach to the modular engineering of metabolism.

Authors:  Cheryl A Kerfeld
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-09-26       Impact factor: 6.237

6.  The N Terminus of the PduB Protein Binds the Protein Shell of the Pdu Microcompartment to Its Enzymatic Core.

Authors:  Brent P Lehman; Chiranjit Chowdhury; Thomas A Bobik
Journal:  J Bacteriol       Date:  2017-03-28       Impact factor: 3.490

Review 7.  Biochemical and synthetic biology approaches to improve photosynthetic CO2-fixation.

Authors:  Tobias J Erb; Jan Zarzycki
Journal:  Curr Opin Chem Biol       Date:  2016-07-09       Impact factor: 8.822

8.  β-Carboxysomal proteins assemble into highly organized structures in Nicotiana chloroplasts.

Authors:  Myat T Lin; Alessandro Occhialini; P John Andralojc; Jean Devonshire; Kevin M Hines; Martin A J Parry; Maureen R Hanson
Journal:  Plant J       Date:  2014-06-09       Impact factor: 6.417

9.  Solution structure of a bacterial microcompartment targeting peptide and its application in the construction of an ethanol bioreactor.

Authors:  Andrew D Lawrence; Stefanie Frank; Sarah Newnham; Matthew J Lee; Ian R Brown; Wei-Feng Xue; Michelle L Rowe; Daniel P Mulvihill; Michael B Prentice; Mark J Howard; Martin J Warren
Journal:  ACS Synth Biol       Date:  2014-02-24       Impact factor: 5.110

Review 10.  Molecular tools for chemical biotechnology.

Authors:  Stephanie Galanie; Michael S Siddiqui; Christina D Smolke
Journal:  Curr Opin Biotechnol       Date:  2013-03-23       Impact factor: 9.740

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