Literature DB >> 22116034

Estimation of pore size in a microstructure phantom using the optimised gradient waveform diffusion weighted NMR sequence.

Bernard Siow1, Ivana Drobnjak, Aritrick Chatterjee, Mark F Lythgoe, Daniel C Alexander.   

Abstract

There has been increasing interest in nuclear magnetic resonance (NMR) techniques that are sensitive to diffusion of molecules containing NMR visible nuclei for the estimation of microstructure parameters. A microstructure parameter of particular interest is pore radius distribution. A recent in silico study optimised the shape of the gradient waveform in diffusion weighted spin-echo experiments for estimating pore size. The study demonstrated that optimised gradient waveform (GEN) protocols improve pore radius estimates compared to optimised pulse gradient spin-echo (PGSE) protocols, particularly at shorter length scales. This study assesses the feasibility of implementing GEN protocols on a small bore 9.4 T scanner and verifies their additional sensitivity to pore radius. We implement GEN and PGSE protocols optimised for pore radii of 1, 2.5, 5, 7.5, 10 μm and constrained to maximum gradient strengths of 40, 80, 200 mT m(-1). We construct microstructure phantoms, which have a single pore radius for each phantom, using microcapillary fibres. The measured signal shows good agreement with simulated signal, strongly indicating that the GEN waveforms can be implemented on a 9.4 T system. We also demonstrate that GEN protocols provide improved sensitivity to the smaller pore radii when compared to optimised PGSE protocols, particularly at the lower gradient amplitudes investigated in this study. Our results suggest that this improved sensitivity of GEN protocols would be reflected in clinical scenarios.
Copyright © 2011 Elsevier Inc. All rights reserved.

Mesh:

Year:  2011        PMID: 22116034     DOI: 10.1016/j.jmr.2011.10.004

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  16 in total

1.  High-gradient diffusion MRI reveals distinct estimates of axon diameter index within different white matter tracts in the in vivo human brain.

Authors:  Susie Y Huang; Qiyuan Tian; Qiuyun Fan; Thomas Witzel; Barbara Wichtmann; Jennifer A McNab; J Daniel Bireley; Natalya Machado; Eric C Klawiter; Choukri Mekkaoui; Lawrence L Wald; Aapo Nummenmaa
Journal:  Brain Struct Funct       Date:  2019-09-28       Impact factor: 3.270

2.  Assessing the accuracy of using oscillating gradient spin echo sequences with AxCaliber to infer micron-sized axon diameters.

Authors:  Morgan Mercredi; Trevor J Vincent; Christopher P Bidinosti; Melanie Martin
Journal:  MAGMA       Date:  2016-07-13       Impact factor: 2.310

3.  Toward faster inference of micron-scale axon diameters using Monte Carlo simulations.

Authors:  Morgan Mercredi; Melanie Martin
Journal:  MAGMA       Date:  2018-03-07       Impact factor: 2.310

Review 4.  Physical and numerical phantoms for the validation of brain microstructural MRI: A cookbook.

Authors:  Els Fieremans; Hong-Hsi Lee
Journal:  Neuroimage       Date:  2018-06-18       Impact factor: 6.556

5.  Fast and robust measurement of microstructural dimensions using temporal diffusion spectroscopy.

Authors:  Hua Li; John C Gore; Junzhong Xu
Journal:  J Magn Reson       Date:  2014-02-19       Impact factor: 2.229

6.  The impact of gradient strength on in vivo diffusion MRI estimates of axon diameter.

Authors:  Susie Y Huang; Aapo Nummenmaa; Thomas Witzel; Tanguy Duval; Julien Cohen-Adad; Lawrence L Wald; Jennifer A McNab
Journal:  Neuroimage       Date:  2014-12-09       Impact factor: 6.556

7.  Oscillating gradient diffusion kurtosis imaging of normal and injured mouse brains.

Authors:  Dan Wu; Qiang Li; Frances J Northington; Jiangyang Zhang
Journal:  NMR Biomed       Date:  2018-03-30       Impact factor: 4.044

8.  Size Distribution Imaging by Non-Uniform Oscillating-Gradient Spin Echo (NOGSE) MRI.

Authors:  Noam Shemesh; Gonzalo A Álvarez; Lucio Frydman
Journal:  PLoS One       Date:  2015-07-21       Impact factor: 3.240

Review 9.  Measuring restriction sizes using diffusion weighted magnetic resonance imaging: a review.

Authors:  Melanie Martin
Journal:  Magn Reson Insights       Date:  2013-05-19

10.  Diffusion microscopic MRI of the mouse embryo: Protocol and practical implementation in the splotch mouse model.

Authors:  Francesca C Norris; Bernard M Siow; Jon O Cleary; Jack A Wells; Sandra C P De Castro; Roger J Ordidge; Nicholas D E Greene; Andrew J Copp; Peter J Scambler; Daniel C Alexander; Mark F Lythgoe
Journal:  Magn Reson Med       Date:  2014-03-13       Impact factor: 4.668

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