Literature DB >> 25498429

The impact of gradient strength on in vivo diffusion MRI estimates of axon diameter.

Susie Y Huang1, Aapo Nummenmaa2, Thomas Witzel2, Tanguy Duval3, Julien Cohen-Adad3, Lawrence L Wald4, Jennifer A McNab5.   

Abstract

Diffusion magnetic resonance imaging (MRI) methods for axon diameter mapping benefit from higher maximum gradient strengths than are currently available on commercial human scanners. Using a dedicated high-gradient 3T human MRI scanner with a maximum gradient strength of 300 mT/m, we systematically studied the effect of gradient strength on in vivo axon diameter and density estimates in the human corpus callosum. Pulsed gradient spin echo experiments were performed in a single scan session lasting approximately 2h on each of three human subjects. The data were then divided into subsets with maximum gradient strengths of 77, 145, 212, and 293 mT/m and diffusion times encompassing short (16 and 25 ms) and long (60 and 94 ms) diffusion time regimes. A three-compartment model of intra-axonal diffusion, extra-axonal diffusion, and free diffusion in cerebrospinal fluid was fitted to the data using a Markov chain Monte Carlo approach. For the acquisition parameters, model, and fitting routine used in our study, it was found that higher maximum gradient strengths decreased the mean axon diameter estimates by two to three fold and decreased the uncertainty in axon diameter estimates by more than half across the corpus callosum. The exclusive use of longer diffusion times resulted in axon diameter estimates that were up to two times larger than those obtained with shorter diffusion times. Axon diameter and density maps appeared less noisy and showed improved contrast between different regions of the corpus callosum with higher maximum gradient strength. Known differences in axon diameter and density between the genu, body, and splenium of the corpus callosum were preserved and became more reproducible at higher maximum gradient strengths. Our results suggest that an optimal q-space sampling scheme for estimating in vivo axon diameters should incorporate the highest possible gradient strength. The improvement in axon diameter and density estimates that we demonstrate from increasing maximum gradient strength will inform protocol development and encourage the adoption of higher maximum gradient strengths for use in commercial human scanners.
Copyright © 2014 Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 25498429      PMCID: PMC4285777          DOI: 10.1016/j.neuroimage.2014.12.008

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  60 in total

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Authors:  Yaniv Assaf; Raisa Z Freidlin; Gustavo K Rohde; Peter J Basser
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2.  Pushing the limits of in vivo diffusion MRI for the Human Connectome Project.

Authors:  K Setsompop; R Kimmlingen; E Eberlein; T Witzel; J Cohen-Adad; J A McNab; B Keil; M D Tisdall; P Hoecht; P Dietz; S F Cauley; V Tountcheva; V Matschl; V H Lenz; K Heberlein; A Potthast; H Thein; J Van Horn; A Toga; F Schmitt; D Lehne; B R Rosen; V Wedeen; L L Wald
Journal:  Neuroimage       Date:  2013-05-24       Impact factor: 6.556

3.  Modeling of the diffusion MR signal in calibrated model systems and nerves.

Authors:  Darya Morozov; Leah Bar; Nir Sochen; Yoram Cohen
Journal:  NMR Biomed       Date:  2013-09-16       Impact factor: 4.044

4.  The importance of being dispersed: A ranking of diffusion MRI models for fibre dispersion using in vivo human brain data.

Authors:  Uran Ferizi; Torben Schneider; Maira Tariq; Claudia A M Wheeler-Kingshott; Hui Zhang; Daniel C Alexander
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

5.  Revealing mesoscopic structural universality with diffusion.

Authors:  Dmitry S Novikov; Jens H Jensen; Joseph A Helpern; Els Fieremans
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-24       Impact factor: 11.205

6.  Traumatic brain injury: diffusion-weighted MR imaging findings.

Authors:  A Y Liu; J A Maldjian; L J Bagley; G P Sinson; R I Grossman
Journal:  AJNR Am J Neuroradiol       Date:  1999-10       Impact factor: 3.825

7.  The Human Connectome Project and beyond: initial applications of 300 mT/m gradients.

Authors:  Jennifer A McNab; Brian L Edlow; Thomas Witzel; Susie Y Huang; Himanshu Bhat; Keith Heberlein; Thorsten Feiweier; Kecheng Liu; Boris Keil; Julien Cohen-Adad; M Dylan Tisdall; Rebecca D Folkerth; Hannah C Kinney; Lawrence L Wald
Journal:  Neuroimage       Date:  2013-05-24       Impact factor: 6.556

8.  Investigating the capability to resolve complex white matter structures with high b-value diffusion magnetic resonance imaging on the MGH-USC Connectom scanner.

Authors:  Qiuyun Fan; Aapo Nummenmaa; Thomas Witzel; Roberta Zanzonico; Boris Keil; Stephen Cauley; Jonathan R Polimeni; Dylan Tisdall; Koene R A Van Dijk; Randy L Buckner; Van J Wedeen; Bruce R Rosen; Lawrence L Wald
Journal:  Brain Connect       Date:  2014-11

9.  Viable and fixed white matter: diffusion magnetic resonance comparisons and contrasts at physiological temperature.

Authors:  Simon Richardson; Bernard Siow; Eleftheria Panagiotaki; Torben Schneider; Mark F Lythgoe; Daniel C Alexander
Journal:  Magn Reson Med       Date:  2013-11-14       Impact factor: 4.668

10.  Contrast and stability of the axon diameter index from microstructure imaging with diffusion MRI.

Authors:  Tim B Dyrby; Lise V Sogaard; Matt G Hall; Maurice Ptito; Daniel C Alexander
Journal:  Magn Reson Med       Date:  2012-09-28       Impact factor: 4.668

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  47 in total

1.  Mesoscopic structure of neuronal tracts from time-dependent diffusion.

Authors:  Lauren M Burcaw; Els Fieremans; Dmitry S Novikov
Journal:  Neuroimage       Date:  2015-03-30       Impact factor: 6.556

Review 2.  Modeling white matter microstructure.

Authors:  T Duval; N Stikov; J Cohen-Adad
Journal:  Funct Neurol       Date:  2016 Oct/Dec

Review 3.  Studying brain microstructure with magnetic susceptibility contrast at high-field.

Authors:  Jeff H Duyn
Journal:  Neuroimage       Date:  2017-02-24       Impact factor: 6.556

4.  High-gradient diffusion MRI reveals distinct estimates of axon diameter index within different white matter tracts in the in vivo human brain.

Authors:  Susie Y Huang; Qiyuan Tian; Qiuyun Fan; Thomas Witzel; Barbara Wichtmann; Jennifer A McNab; J Daniel Bireley; Natalya Machado; Eric C Klawiter; Choukri Mekkaoui; Lawrence L Wald; Aapo Nummenmaa
Journal:  Brain Struct Funct       Date:  2019-09-28       Impact factor: 3.270

5.  Ensemble average propagator-based detection of microstructural alterations after stroke.

Authors:  Lorenza Brusini; Silvia Obertino; Ilaria Boscolo Galazzo; Mauro Zucchelli; Gunnar Krueger; Cristina Granziera; Gloria Menegaz
Journal:  Int J Comput Assist Radiol Surg       Date:  2016-07-01       Impact factor: 2.924

Review 6.  Magnetic Resonance Imaging technology-bridging the gap between noninvasive human imaging and optical microscopy.

Authors:  Jonathan R Polimeni; Lawrence L Wald
Journal:  Curr Opin Neurobiol       Date:  2018-05-11       Impact factor: 6.627

7.  Precise Inference and Characterization of Structural Organization (PICASO) of tissue from molecular diffusion.

Authors:  Lipeng Ning; Evren Özarslan; Carl-Fredrik Westin; Yogesh Rathi
Journal:  Neuroimage       Date:  2016-10-14       Impact factor: 6.556

8.  g-Ratio weighted imaging of the human spinal cord in vivo.

Authors:  T Duval; S Le Vy; N Stikov; J Campbell; A Mezer; T Witzel; B Keil; V Smith; L L Wald; E Klawiter; J Cohen-Adad
Journal:  Neuroimage       Date:  2016-09-22       Impact factor: 6.556

Review 9.  The Human Connectome Project's neuroimaging approach.

Authors:  Matthew F Glasser; Stephen M Smith; Daniel S Marcus; Jesper L R Andersson; Edward J Auerbach; Timothy E J Behrens; Timothy S Coalson; Michael P Harms; Mark Jenkinson; Steen Moeller; Emma C Robinson; Stamatios N Sotiropoulos; Junqian Xu; Essa Yacoub; Kamil Ugurbil; David C Van Essen
Journal:  Nat Neurosci       Date:  2016-08-26       Impact factor: 24.884

10.  Impact of transcytolemmal water exchange on estimates of tissue microstructural properties derived from diffusion MRI.

Authors:  Hua Li; Xiaoyu Jiang; Jingping Xie; John C Gore; Junzhong Xu
Journal:  Magn Reson Med       Date:  2016-06-25       Impact factor: 4.668

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