Literature DB >> 22113917

Newly isolated but uncultivated magnetotactic bacterium of the phylum Nitrospirae from Beijing, China.

Wei Lin1, Jinhua Li, Yongxin Pan.   

Abstract

Magnetotactic bacteria (MTB) in the phylum Nitrospirae synthesize up to hundreds of intracellular bullet-shaped magnetite magnetosomes. In the present study, a watermelon-shaped magnetotactic bacterium (designated MWB-1) from Lake Beihai in Beijing, China, was characterized. This uncultivated microbe was identified as a member of the phylum Nitrospirae and represents a novel phylogenetic lineage with ≥6% 16S rRNA gene sequence divergence from all currently described MTB. MWB-1 contained 200 to 300 intracellular bullet-shaped magnetite magnetosomes and showed a helical swimming trajectory under homogeneous magnetic fields; its magnetotactic velocity decreased with increasing field strength, and vice versa. A robust phylogenetic framework for MWB-1 and all currently known MTB in the phylum Nitrospirae was constructed utilizing maximum-likelihood and Bayesian algorithms, which yielded strong evidence that the Nitrospirae MTB could be divided into four well-supported groups. Considering its population densities in sediment and its high numbers of magnetosomes, MWB-1 was estimated to account for more than 10% of the natural remanent magnetization of the surface sediment. Taken together, the results of this study suggest that MTB in the phylum Nitrospirae are more diverse than previously realized and can make important contributions to the sedimentary magnetization in particular environments.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22113917      PMCID: PMC3264100          DOI: 10.1128/AEM.06764-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  36 in total

1.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.

Authors:  J Castresana
Journal:  Mol Biol Evol       Date:  2000-04       Impact factor: 16.240

2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

3.  Bat head contains soft magnetic particles: evidence from magnetism.

Authors:  Lanxiang Tian; Wei Lin; Shuyi Zhang; Yongxin Pan
Journal:  Bioelectromagnetics       Date:  2010-10       Impact factor: 2.010

4.  Observation of magnetoreceptive behavior in a multicellular magnetotactic prokaryote in higher than geomagnetic fields.

Authors:  Michael Greenberg; Karl Canter; Inga Mahler; Adam Tornheim
Journal:  Biophys J       Date:  2004-11-19       Impact factor: 4.033

5.  Culture-independent characterization of a novel, uncultivated magnetotactic member of the Nitrospirae phylum.

Authors:  Christopher T Lefèvre; Richard B Frankel; Fernanda Abreu; Ulysses Lins; Dennis A Bazylinski
Journal:  Environ Microbiol       Date:  2010-10-26       Impact factor: 5.491

6.  A biogeographic distribution of magnetotactic bacteria influenced by salinity.

Authors:  Wei Lin; Yinzhao Wang; Bi Li; Yongxin Pan
Journal:  ISME J       Date:  2011-08-25       Impact factor: 10.302

7.  Magneto-aerotaxis in marine coccoid bacteria.

Authors:  R B Frankel; D A Bazylinski; M S Johnson; B L Taylor
Journal:  Biophys J       Date:  1997-08       Impact factor: 4.033

8.  Metagenomic analysis reveals unexpected subgenomic diversity of magnetotactic bacteria within the phylum Nitrospirae.

Authors:  Wei Lin; Christian Jogler; Dirk Schüler; Yongxin Pan
Journal:  Appl Environ Microbiol       Date:  2010-11-05       Impact factor: 4.792

9.  Conservation of proteobacterial magnetosome genes and structures in an uncultivated member of the deep-branching Nitrospira phylum.

Authors:  Christian Jogler; Gerhard Wanner; Sebastian Kolinko; Martina Niebler; Rudolf Amann; Nikolai Petersen; Michael Kube; Richard Reinhardt; Dirk Schüler
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-29       Impact factor: 11.205

10.  Cultivation-independent characterization of 'Candidatus Magnetobacterium bavaricum' via ultrastructural, geochemical, ecological and metagenomic methods.

Authors:  C Jogler; M Niebler; W Lin; M Kube; G Wanner; S Kolinko; P Stief; A J Beck; D De Beer; N Petersen; Y Pan; R Amann; R Reinhardt; D Schüler
Journal:  Environ Microbiol       Date:  2010-04-19       Impact factor: 5.491

View more
  19 in total

Review 1.  Ecology, diversity, and evolution of magnetotactic bacteria.

Authors:  Christopher T Lefèvre; Dennis A Bazylinski
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

2.  Crystal growth of bullet-shaped magnetite in magnetotactic bacteria of the Nitrospirae phylum.

Authors:  Jinhua Li; Nicolas Menguy; Christophe Gatel; Victor Boureau; Etienne Snoeck; Gilles Patriarche; Eric Leroy; Yongxin Pan
Journal:  J R Soc Interface       Date:  2015-02-06       Impact factor: 4.118

3.  Phylogenetic and Structural Identification of a Novel Magnetotactic Deltaproteobacteria Strain, WYHR-1, from a Freshwater Lake.

Authors:  Jinhua Li; Heng Zhang; Peiyu Liu; Nicolas Menguy; Andrew P Roberts; Haitao Chen; Yinzhao Wang; Yongxin Pan
Journal:  Appl Environ Microbiol       Date:  2019-07-01       Impact factor: 4.792

4.  Collection, isolation and enrichment of naturally occurring magnetotactic bacteria from the environment.

Authors:  Zachery Oestreicher; Steven K Lower; Wei Lin; Brian H Lower
Journal:  J Vis Exp       Date:  2012-11-15       Impact factor: 1.355

5.  Novel rod-shaped magnetotactic bacteria belonging to the class Alphaproteobacteria.

Authors:  Wen-Yan Zhang; Ke Zhou; Hong-Miao Pan; Hai-Jian Du; Yi-Ran Chen; Rui Zhang; Wanneng Ye; Chaojing Lu; Tian Xiao; Long-Fei Wu
Journal:  Appl Environ Microbiol       Date:  2013-03-01       Impact factor: 4.792

Review 6.  Magnetosome biogenesis in magnetotactic bacteria.

Authors:  René Uebe; Dirk Schüler
Journal:  Nat Rev Microbiol       Date:  2016-09-13       Impact factor: 60.633

7.  Genomic insights into the uncultured genus 'Candidatus Magnetobacterium' in the phylum Nitrospirae.

Authors:  Wei Lin; Aihua Deng; Zhang Wang; Ying Li; Tingyi Wen; Long-Fei Wu; Martin Wu; Yongxin Pan
Journal:  ISME J       Date:  2014-06-10       Impact factor: 10.302

8.  Integrating niche-based process and spatial process in biogeography of magnetotactic bacteria.

Authors:  Wei Lin; Yinzhao Wang; Yuri Gorby; Kenneth Nealson; Yongxin Pan
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

Review 9.  Phylogenetic significance of composition and crystal morphology of magnetosome minerals.

Authors:  Mihály Pósfai; Christopher T Lefèvre; Denis Trubitsyn; Dennis A Bazylinski; Richard B Frankel
Journal:  Front Microbiol       Date:  2013-11-26       Impact factor: 5.640

10.  New paradigm for tumor theranostic methodology using bacteria-based microrobot.

Authors:  Sung Jun Park; Seung-Hwan Park; Sunghoon Cho; Deok-Mi Kim; Yeonkyung Lee; Seong Young Ko; Yeongjin Hong; Hyon E Choy; Jung-Joon Min; Jong-Oh Park; Sukho Park
Journal:  Sci Rep       Date:  2013-12-02       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.