Literature DB >> 21866181

A biogeographic distribution of magnetotactic bacteria influenced by salinity.

Wei Lin1, Yinzhao Wang, Bi Li, Yongxin Pan.   

Abstract

Magnetotactic bacteria (MTB), which synthesize intracellular ferromagnetic magnetite and/or greigite magnetosomes, have significant roles in global iron cycling in aquatic systems, as well as sedimentary magnetism. The occurrence of MTB has been reported in aquatic environments from freshwater to marine ecosystems; however, the distribution of MTB across heterogeneous habitats remains unclear. Here we examined the MTB communities from diverse habitats across northern and southern China, using comprehensive transmission electron microscopy and comparison of 16S rRNA gene analyses. A total of 334 16S rRNA gene sequences were analyzed, representing the most comprehensive analysis on the diversity and distribution of MTB to date. The majority (95%) of sequences belong to the Alphaproteobacteria, whereas a population of giant magnetotactic rod is affiliated with the Nitrospirae phylum. By a statistical comparison of these sequence data and publicly available MTB sequences, we infer for the first time that the composition of MTB communities represents a biogeographic distribution across globally heterogeneous environments, which is influenced by salinity.

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Year:  2011        PMID: 21866181      PMCID: PMC3260504          DOI: 10.1038/ismej.2011.112

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  19 in total

1.  Combined approach for characterization of uncultivated magnetotactic bacteria from various aquatic environments.

Authors:  Christine B Flies; Jörg Peplies; Dirk Schüler
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

2.  'Everything is everywhere, but, the environment selects'; what did Baas Becking and Beijerinck really say?

Authors:  Rutger de Wit; Thierry Bouvier
Journal:  Environ Microbiol       Date:  2006-04       Impact factor: 5.491

3.  Uncultivated magnetotactic cocci from yuandadu park in beijing, china.

Authors:  Wei Lin; Yongxin Pan
Journal:  Appl Environ Microbiol       Date:  2009-04-17       Impact factor: 4.792

Review 4.  Magnetotactic bacteria and magnetosomes.

Authors:  Damien Faivre; Dirk Schüler
Journal:  Chem Rev       Date:  2008-10-15       Impact factor: 60.622

5.  Metagenomic analysis reveals unexpected subgenomic diversity of magnetotactic bacteria within the phylum Nitrospirae.

Authors:  Wei Lin; Christian Jogler; Dirk Schüler; Yongxin Pan
Journal:  Appl Environ Microbiol       Date:  2010-11-05       Impact factor: 4.792

6.  Conservation of proteobacterial magnetosome genes and structures in an uncultivated member of the deep-branching Nitrospira phylum.

Authors:  Christian Jogler; Gerhard Wanner; Sebastian Kolinko; Martina Niebler; Rudolf Amann; Nikolai Petersen; Michael Kube; Richard Reinhardt; Dirk Schüler
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-29       Impact factor: 11.205

7.  Cultivation-independent characterization of 'Candidatus Magnetobacterium bavaricum' via ultrastructural, geochemical, ecological and metagenomic methods.

Authors:  C Jogler; M Niebler; W Lin; M Kube; G Wanner; S Kolinko; P Stief; A J Beck; D De Beer; N Petersen; Y Pan; R Amann; R Reinhardt; D Schüler
Journal:  Environ Microbiol       Date:  2010-04-19       Impact factor: 5.491

Review 8.  Prokaryotes: the unseen majority.

Authors:  W B Whitman; D C Coleman; W J Wiebe
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

9.  Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data.

Authors:  Micah Hamady; Catherine Lozupone; Rob Knight
Journal:  ISME J       Date:  2009-08-27       Impact factor: 10.302

10.  Short pyrosequencing reads suffice for accurate microbial community analysis.

Authors:  Zongzhi Liu; Catherine Lozupone; Micah Hamady; Frederic D Bushman; Rob Knight
Journal:  Nucleic Acids Res       Date:  2007-09-18       Impact factor: 16.971

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  15 in total

1.  Constant Flux of Spatial Niche Partitioning through High-Resolution Sampling of Magnetotactic Bacteria.

Authors:  Kuang He; Stuart A Gilder; William D Orsi; Xiangyu Zhao; Nikolai Petersen
Journal:  Appl Environ Microbiol       Date:  2017-09-29       Impact factor: 4.792

2.  Magnetotactic bacteria population in a pristine French Atlantic lagoon.

Authors:  Nathalie Pradel; Maxime Fuduche; Bernard Ollivier
Journal:  Environ Sci Pollut Res Int       Date:  2015-09-03       Impact factor: 4.223

Review 3.  Ecology, diversity, and evolution of magnetotactic bacteria.

Authors:  Christopher T Lefèvre; Dennis A Bazylinski
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

4.  Diversity of magnetotactic bacteria from a French pristine Mediterranean area.

Authors:  Maxime Fuduche; Anne Postec; Sylvain Davidson; Jean-Paul Chauvin; Grégoire Galès; Agnès Hirschler-Réa; Bernard Ollivier; Long-Fei Wu; Nathalie Pradel
Journal:  Curr Microbiol       Date:  2014-12-09       Impact factor: 2.188

5.  High diversity of magnetotactic deltaproteobacteria in a freshwater niche.

Authors:  Yinzhao Wang; Wei Lin; Jinhua Li; Yongxin Pan
Journal:  Appl Environ Microbiol       Date:  2013-02-01       Impact factor: 4.792

6.  Newly isolated but uncultivated magnetotactic bacterium of the phylum Nitrospirae from Beijing, China.

Authors:  Wei Lin; Jinhua Li; Yongxin Pan
Journal:  Appl Environ Microbiol       Date:  2011-11-23       Impact factor: 4.792

7.  Metagenomic and Microscopic Analysis of Magnetotactic Bacteria in Tangyin Hydrothermal Field of Okinawa Trough.

Authors:  Si Chen; Min Yu; Wenyan Zhang; Kuang He; Hongmiao Pan; Kaixuan Cui; Yicong Zhao; Xiao-Hua Zhang; Tian Xiao; Wuchang Zhang; Long-Fei Wu
Journal:  Front Microbiol       Date:  2022-06-10       Impact factor: 6.064

8.  Isolation and characterization of Magnetospirillum from saline lagoon.

Authors:  T Revathy; Jobin John Jacob; M A Jayasri; K Suthindhiran
Journal:  World J Microbiol Biotechnol       Date:  2016-06-04       Impact factor: 3.312

9.  Integrating niche-based process and spatial process in biogeography of magnetotactic bacteria.

Authors:  Wei Lin; Yinzhao Wang; Yuri Gorby; Kenneth Nealson; Yongxin Pan
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

10.  Short-term effects of temperature on the abundance and diversity of magnetotactic cocci.

Authors:  Wei Lin; Yinzhao Wang; Yongxin Pan
Journal:  Microbiologyopen       Date:  2012-03       Impact factor: 3.139

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