| Literature DB >> 22091042 |
Ana C Mafud1, Edgar A Sanches, Maria Teresa Gambardella.
Abstract
The title compound, C(4)H(10)NO(+)·C(5)H(8)NOS(2) (-), is built up of a morpholinium cation and a dithio-carbamate anion. In the crystal, two structurally independent formula units are linked via N-H⋯S hydrogen bonds, forming an inversion dimer, with graph-set motif R(4) (4)(12).Entities:
Year: 2011 PMID: 22091042 PMCID: PMC3213463 DOI: 10.1107/S1600536811026286
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C4H10NO+·C5H8NOS2− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 15 reflections |
| θ = 5.5–15.9° | |
| µ = 0.43 mm−1 | |
| β = 110.021 (5)° | Prism, colourless |
| 0.3 × 0.15 × 0.15 mm | |
| Enraf–Nonius TurboCAD-4 diffractometer | |
| graphite | θmax = 30.0°, θmin = 2.7° |
| non–profiled ω/2θ scans | |
| Absorption correction: ψ scan (North | |
| 3705 measured reflections | 3 standard reflections every 120 min |
| 3487 independent reflections | intensity decay: 5% |
| 2021 reflections with |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 3487 reflections | (Δ/σ)max = 0.004 |
| 190 parameters | Δρmax = 0.56 e Å−3 |
| 0 restraints | Δρmin = −0.39 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.20657 (9) | 0.07843 (4) | 0.84253 (7) | 0.03827 (19) | |
| S2 | 0.34115 (10) | −0.02991 (4) | 0.66044 (8) | 0.0448 (2) | |
| O2 | 0.7186 (3) | 0.20279 (12) | 0.8050 (3) | 0.0558 (5) | |
| O1 | 0.1390 (3) | 0.19488 (11) | 0.2852 (2) | 0.0547 (6) | |
| N1 | 0.1685 (3) | 0.09147 (11) | 0.5323 (2) | 0.0344 (5) | |
| N2 | 0.6455 (3) | 0.09075 (12) | 0.9933 (3) | 0.0352 (5) | |
| C1 | 0.2314 (3) | 0.04987 (13) | 0.6648 (3) | 0.0301 (5) | |
| C2 | 0.1739 (4) | 0.06872 (15) | 0.3746 (3) | 0.0425 (6) | |
| C3 | 0.2422 (4) | 0.13083 (16) | 0.2981 (4) | 0.0458 (7) | |
| C4 | 0.0698 (4) | 0.15994 (15) | 0.5227 (3) | 0.0390 (6) | |
| C5 | 0.1441 (5) | 0.21801 (15) | 0.4412 (4) | 0.0472 (7) | |
| C6 | 0.7585 (5) | 0.07751 (17) | 0.8933 (4) | 0.0478 (7) | |
| C7 | 0.7033 (5) | 0.12905 (18) | 0.7531 (4) | 0.0506 (7) | |
| C8 | 0.6555 (5) | 0.16802 (17) | 1.0443 (4) | 0.0515 (7) | |
| C9 | 0.6074 (5) | 0.21637 (17) | 0.8988 (4) | 0.0556 (8) | |
| H1N | 0.537 (5) | 0.079 (2) | 0.936 (4) | 0.067* | |
| H2N | 0.681 (4) | 0.063 (2) | 1.085 (4) | 0.067* | |
| H2A | 0.050 (4) | 0.053 (2) | 0.304 (4) | 0.067* | |
| H2B | 0.248 (4) | 0.027 (2) | 0.394 (4) | 0.067* | |
| H3A | 0.368 (4) | 0.1441 (19) | 0.369 (4) | 0.067* | |
| H3B | 0.229 (4) | 0.1177 (19) | 0.187 (4) | 0.067* | |
| H4A | −0.053 (5) | 0.1527 (19) | 0.457 (4) | 0.067* | |
| H4B | 0.088 (5) | 0.1751 (18) | 0.628 (4) | 0.067* | |
| H5A | 0.274 (5) | 0.2265 (19) | 0.512 (4) | 0.067* | |
| H5B | 0.073 (4) | 0.261 (2) | 0.419 (4) | 0.067* | |
| H6A | 0.887 (5) | 0.0884 (19) | 0.966 (4) | 0.067* | |
| H6B | 0.748 (4) | 0.031 (2) | 0.863 (4) | 0.067* | |
| H7A | 0.582 (5) | 0.1189 (19) | 0.685 (4) | 0.067* | |
| H7B | 0.786 (4) | 0.125 (2) | 0.697 (4) | 0.067* | |
| H8A | 0.791 (5) | 0.1709 (19) | 1.118 (4) | 0.067* | |
| H8B | 0.590 (5) | 0.1737 (19) | 1.108 (4) | 0.067* | |
| H9A | 0.481 (5) | 0.2048 (19) | 0.826 (4) | 0.067* | |
| H9B | 0.628 (5) | 0.265 (2) | 0.933 (4) | 0.067* |
| S1 | 0.0437 (4) | 0.0446 (4) | 0.0318 (3) | 0.0029 (3) | 0.0197 (3) | 0.0001 (3) |
| S2 | 0.0620 (5) | 0.0378 (4) | 0.0438 (4) | 0.0134 (3) | 0.0300 (3) | 0.0079 (3) |
| O2 | 0.0626 (14) | 0.0449 (12) | 0.0676 (13) | −0.0052 (10) | 0.0324 (11) | 0.0156 (10) |
| O1 | 0.0774 (15) | 0.0474 (12) | 0.0479 (11) | 0.0132 (10) | 0.0324 (10) | 0.0173 (9) |
| N1 | 0.0462 (13) | 0.0290 (10) | 0.0307 (10) | 0.0011 (8) | 0.0165 (9) | 0.0002 (8) |
| N2 | 0.0395 (12) | 0.0350 (11) | 0.0336 (10) | −0.0027 (9) | 0.0157 (9) | 0.0043 (8) |
| C1 | 0.0302 (11) | 0.0313 (11) | 0.0309 (11) | −0.0057 (9) | 0.0131 (9) | −0.0006 (9) |
| C2 | 0.0670 (19) | 0.0366 (14) | 0.0269 (12) | −0.0020 (13) | 0.0199 (12) | −0.0014 (10) |
| C3 | 0.0606 (19) | 0.0446 (16) | 0.0388 (14) | 0.0013 (14) | 0.0254 (13) | 0.0046 (12) |
| C4 | 0.0445 (16) | 0.0373 (14) | 0.0382 (13) | 0.0062 (11) | 0.0180 (12) | 0.0031 (11) |
| C5 | 0.0602 (19) | 0.0332 (14) | 0.0537 (17) | 0.0073 (13) | 0.0267 (14) | 0.0094 (12) |
| C6 | 0.0612 (19) | 0.0389 (15) | 0.0571 (17) | 0.0089 (14) | 0.0379 (15) | 0.0054 (13) |
| C7 | 0.0625 (19) | 0.0549 (18) | 0.0460 (16) | −0.0029 (15) | 0.0336 (15) | 0.0057 (13) |
| C8 | 0.071 (2) | 0.0428 (16) | 0.0476 (16) | 0.0035 (14) | 0.0285 (15) | −0.0029 (12) |
| C9 | 0.071 (2) | 0.0342 (15) | 0.069 (2) | 0.0078 (15) | 0.0329 (17) | 0.0062 (14) |
| S1—C1 | 1.728 (2) | C3—H3B | 0.98 (4) |
| S2—C1 | 1.709 (2) | C4—C5 | 1.512 (4) |
| O2—C7 | 1.418 (4) | C4—H4A | 0.96 (3) |
| O2—C9 | 1.423 (4) | C4—H4B | 0.93 (3) |
| O1—C3 | 1.414 (3) | C5—H5A | 1.02 (3) |
| O1—C5 | 1.428 (3) | C5—H5B | 0.94 (4) |
| N1—C1 | 1.341 (3) | C6—C7 | 1.498 (4) |
| N1—C4 | 1.466 (3) | C6—H6A | 1.02 (3) |
| N1—C2 | 1.468 (3) | C6—H6B | 0.89 (4) |
| N2—C6 | 1.478 (3) | C7—H7A | 0.96 (3) |
| N2—C8 | 1.480 (4) | C7—H7B | 0.95 (4) |
| N2—H1N | 0.86 (4) | C8—C9 | 1.498 (4) |
| N2—H2N | 0.91 (4) | C8—H8A | 1.05 (3) |
| C2—C3 | 1.515 (4) | C8—H8B | 0.90 (3) |
| C2—H2A | 1.01 (3) | C9—H9A | 1.01 (3) |
| C2—H2B | 0.94 (4) | C9—H9B | 0.94 (4) |
| C3—H3A | 1.01 (3) | ||
| C7—O2—C9 | 110.7 (2) | H4A—C4—H4B | 115 (3) |
| C3—O1—C5 | 110.1 (2) | O1—C5—C4 | 111.3 (2) |
| C1—N1—C4 | 124.7 (2) | O1—C5—H5A | 108.8 (19) |
| C1—N1—C2 | 122.8 (2) | C4—C5—H5A | 107.2 (19) |
| C4—N1—C2 | 112.2 (2) | O1—C5—H5B | 103 (2) |
| C6—N2—C8 | 111.0 (2) | C4—C5—H5B | 112 (2) |
| C6—N2—H1N | 107 (2) | H5A—C5—H5B | 114 (3) |
| C8—N2—H1N | 111 (2) | N2—C6—C7 | 108.9 (2) |
| C6—N2—H2N | 112 (2) | N2—C6—H6A | 106.0 (19) |
| C8—N2—H2N | 107 (2) | C7—C6—H6A | 109.9 (19) |
| H1N—N2—H2N | 109 (3) | N2—C6—H6B | 109 (2) |
| N1—C1—S2 | 120.49 (17) | C7—C6—H6B | 113 (2) |
| N1—C1—S1 | 119.70 (18) | H6A—C6—H6B | 110 (3) |
| S2—C1—S1 | 119.79 (13) | O2—C7—C6 | 111.4 (3) |
| N1—C2—C3 | 109.9 (2) | O2—C7—H7A | 110 (2) |
| N1—C2—H2A | 109.1 (19) | C6—C7—H7A | 110 (2) |
| C3—C2—H2A | 111 (2) | O2—C7—H7B | 104 (2) |
| N1—C2—H2B | 106 (2) | C6—C7—H7B | 109 (2) |
| C3—C2—H2B | 113 (2) | H7A—C7—H7B | 112 (3) |
| H2A—C2—H2B | 108 (3) | N2—C8—C9 | 109.5 (2) |
| O1—C3—C2 | 111.9 (2) | N2—C8—H8A | 100.0 (19) |
| O1—C3—H3A | 106 (2) | C9—C8—H8A | 114.1 (19) |
| C2—C3—H3A | 109.6 (19) | N2—C8—H8B | 109 (2) |
| O1—C3—H3B | 105 (2) | C9—C8—H8B | 116 (2) |
| C2—C3—H3B | 109 (2) | H8A—C8—H8B | 107 (3) |
| H3A—C3—H3B | 115 (3) | O2—C9—C8 | 111.6 (3) |
| N1—C4—C5 | 110.0 (2) | O2—C9—H9A | 105.6 (19) |
| N1—C4—H4A | 109 (2) | C8—C9—H9A | 109.2 (19) |
| C5—C4—H4A | 107 (2) | O2—C9—H9B | 106 (2) |
| N1—C4—H4B | 107 (2) | C8—C9—H9B | 109 (2) |
| C5—C4—H4B | 108 (2) | H9A—C9—H9B | 116 (3) |
| C4—N1—C1—S2 | 178.8 (2) | C2—N1—C4—C5 | −53.1 (3) |
| C2—N1—C1—S2 | 5.9 (3) | C3—O1—C5—C4 | −60.0 (3) |
| C4—N1—C1—S1 | −3.0 (3) | N1—C4—C5—O1 | 56.4 (3) |
| C2—N1—C1—S1 | −175.9 (2) | C8—N2—C6—C7 | −55.7 (4) |
| C1—N1—C2—C3 | −133.9 (3) | C9—O2—C7—C6 | −60.0 (4) |
| C4—N1—C2—C3 | 52.4 (3) | N2—C6—C7—O2 | 58.1 (4) |
| C5—O1—C3—C2 | 59.7 (3) | C6—N2—C8—C9 | 54.9 (4) |
| N1—C2—C3—O1 | −55.7 (3) | C7—O2—C9—C8 | 59.0 (4) |
| C1—N1—C4—C5 | 133.4 (3) | N2—C8—C9—O2 | −56.2 (4) |
| H··· | ||||
| N2—H1N···S1 | 0.86 (4) | 2.47 (4) | 3.284 (3) | 158 (3) |
| N2—H2N···S1i | 0.91 (4) | 2.75 (4) | 3.453 (2) | 135 (3) |
| N2—H2N···S2i | 0.91 (4) | 2.39 (3) | 3.221 (2) | 151 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1 | 0.86 (4) | 2.47 (4) | 3.284 (3) | 158 (3) |
| N2—H2 | 0.91 (4) | 2.75 (4) | 3.453 (2) | 135 (3) |
| N2—H2 | 0.91 (4) | 2.39 (3) | 3.221 (2) | 151 (3) |
Symmetry code: (i) .