| Literature DB >> 21836925 |
Ana C Mafud1, Maria Teresa P Gambardella.
Abstract
The asymmetric unit of the title compound, Na(+)·C(6)H(10)NS(2) (-)·2H(2)O, is composed of a sodium cation, a piperidine-dithio-carbamate anion which exhibits positional disorder, and two lattice water mol-ecules. The atoms of the piperidine ring are divided over two sites with occupancy factors of 0.554 (6) and 0.446 (6). In the crystal, the sodium cation (coordination number of 6) and the piperidine-dithio-carbamate anion are linked, forming an infinite two-dimensional network extending parallel to (001). O-H⋯S hydrogen bonds, involving the lattice water mol-ecules, also aid in stabilizing the crystal sructure.Entities:
Year: 2011 PMID: 21836925 PMCID: PMC3151976 DOI: 10.1107/S1600536811022604
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| Na+·C6H10NS2−·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yab | Cell parameters from 24030 reflections |
| θ = 2.9–26.7° | |
| µ = 0.51 mm−1 | |
| β = 95.519 (5)° | Prism, colourless |
| 0.02 × 0.02 × 0.02 mm | |
| Nonius KappaCCD diffractometer | 1482 reflections with |
| Radiation source: Enraf Nonius FR590 | |
| graphite | θmax = 25.1°, θmin = 3.3° |
| Detector resolution: 9 pixels mm-1 | |
| CCD rotation images, thick slices scans | |
| 7553 measured reflections | |
| 1863 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1863 reflections | (Δ/σ)max < 0.001 |
| 176 parameters | Δρmax = 0.33 e Å−3 |
| 6 restraints | Δρmin = −0.36 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S1 | 0.74854 (5) | 0.03097 (13) | 0.39216 (4) | 0.0481 (3) | |
| S2 | 0.86593 (6) | 0.24242 (13) | 0.24400 (5) | 0.0577 (3) | |
| Na1 | 0.57813 (8) | −0.24210 (16) | 0.48568 (8) | 0.0509 (4) | |
| O1 | 0.41274 (14) | −0.0826 (4) | 0.41396 (13) | 0.0542 (5) | |
| H11O | 0.403 (3) | −0.012 (5) | 0.3644 (17) | 0.081* | |
| H12O | 0.369 (2) | −0.194 (4) | 0.418 (2) | 0.081* | |
| O2 | 0.55132 (14) | −0.5918 (4) | 0.40928 (13) | 0.0533 (5) | |
| H21O | 0.509 (2) | −0.604 (6) | 0.3618 (16) | 0.08* | |
| H22O | 0.604 (2) | −0.687 (5) | 0.409 (2) | 0.08* | |
| C1 | 0.7694 (2) | 0.0599 (5) | 0.27824 (18) | 0.0551 (7) | |
| N1 | 0.6797 (6) | 0.0084 (12) | 0.2149 (4) | 0.0541 (16) | 0.446 (6) |
| C2 | 0.6746 (8) | 0.0673 (16) | 0.1177 (5) | 0.081 (3) | 0.446 (6) |
| H2A | 0.73 | 0.1807 | 0.1092 | 0.097* | 0.446 (6) |
| H2B | 0.6034 | 0.1336 | 0.0991 | 0.097* | 0.446 (6) |
| C3 | 0.6917 (19) | −0.128 (5) | 0.0585 (18) | 0.095 (8) | 0.446 (6) |
| H3A | 0.7657 | −0.1862 | 0.0716 | 0.114* | 0.446 (6) |
| H3B | 0.6818 | −0.0832 | −0.0053 | 0.114* | 0.446 (6) |
| C4 | 0.6069 (10) | −0.314 (3) | 0.0773 (10) | 0.079 (4) | 0.446 (6) |
| H4A | 0.5339 | −0.2616 | 0.0555 | 0.095* | 0.446 (6) |
| H4B | 0.6218 | −0.449 | 0.043 | 0.095* | 0.446 (6) |
| C5 | 0.6089 (7) | −0.3753 (16) | 0.1787 (6) | 0.076 (2) | 0.446 (6) |
| H5A | 0.5505 | −0.4818 | 0.1877 | 0.091* | 0.446 (6) |
| H5B | 0.6784 | −0.4451 | 0.1998 | 0.091* | 0.446 (6) |
| C6 | 0.5931 (7) | −0.1592 (18) | 0.2320 (6) | 0.067 (2) | 0.446 (6) |
| H6A | 0.5213 | −0.0958 | 0.2135 | 0.08* | 0.446 (6) |
| H6B | 0.5969 | −0.1932 | 0.2969 | 0.08* | 0.446 (6) |
| N1' | 0.7338 (4) | −0.1085 (10) | 0.2187 (3) | 0.0516 (13) | 0.554 (6) |
| C2' | 0.7582 (5) | −0.1213 (13) | 0.1240 (4) | 0.0677 (19) | 0.554 (6) |
| H2'1 | 0.7906 | −0.267 | 0.1125 | 0.081* | 0.554 (6) |
| H2'2 | 0.8103 | −0.0042 | 0.1119 | 0.081* | 0.554 (6) |
| C3' | 0.6545 (14) | −0.091 (5) | 0.0626 (11) | 0.095 (6) | 0.554 (6) |
| H3'1 | 0.6717 | −0.1086 | −0.0002 | 0.115* | 0.554 (6) |
| H3'2 | 0.6291 | 0.0629 | 0.0693 | 0.115* | 0.554 (6) |
| C4' | 0.5616 (9) | −0.249 (3) | 0.0778 (10) | 0.111 (5) | 0.554 (6) |
| H4'1 | 0.5798 | −0.4026 | 0.0616 | 0.133* | 0.554 (6) |
| H4'2 | 0.4954 | −0.2037 | 0.0407 | 0.133* | 0.554 (6) |
| C5' | 0.5447 (6) | −0.2350 (14) | 0.1783 (6) | 0.082 (2) | 0.554 (6) |
| H5'1 | 0.5157 | −0.0869 | 0.1912 | 0.098* | 0.554 (6) |
| H5'2 | 0.4909 | −0.3471 | 0.1922 | 0.098* | 0.554 (6) |
| C6' | 0.6494 (6) | −0.2736 (13) | 0.2392 (4) | 0.0629 (18) | 0.554 (6) |
| H6'1 | 0.6349 | −0.2592 | 0.3027 | 0.075* | 0.554 (6) |
| H6'2 | 0.6759 | −0.4258 | 0.2299 | 0.075* | 0.554 (6) |
| S1 | 0.0420 (4) | 0.0551 (5) | 0.0476 (4) | 0.0008 (3) | 0.0057 (3) | −0.0027 (3) |
| S2 | 0.0586 (5) | 0.0585 (6) | 0.0565 (5) | −0.0121 (3) | 0.0090 (3) | 0.0002 (3) |
| Na1 | 0.0465 (6) | 0.0453 (8) | 0.0609 (7) | 0.0002 (4) | 0.0053 (5) | −0.0005 (5) |
| O1 | 0.0534 (11) | 0.0470 (13) | 0.0608 (12) | −0.0039 (9) | −0.0015 (9) | 0.0059 (10) |
| O2 | 0.0502 (10) | 0.0497 (13) | 0.0597 (12) | 0.0060 (9) | 0.0033 (8) | −0.0031 (10) |
| C1 | 0.0574 (15) | 0.056 (2) | 0.0512 (15) | −0.0111 (13) | 0.0027 (12) | −0.0035 (14) |
| N1 | 0.062 (4) | 0.052 (4) | 0.047 (3) | −0.008 (3) | −0.001 (3) | 0.000 (2) |
| C2 | 0.108 (6) | 0.080 (7) | 0.051 (4) | −0.026 (5) | −0.008 (4) | 0.007 (4) |
| C3 | 0.104 (14) | 0.107 (13) | 0.079 (10) | −0.051 (11) | 0.044 (10) | −0.030 (8) |
| C4 | 0.077 (8) | 0.090 (9) | 0.070 (6) | −0.033 (7) | 0.003 (6) | −0.028 (7) |
| C5 | 0.070 (5) | 0.070 (6) | 0.088 (6) | −0.017 (5) | 0.014 (4) | 0.000 (5) |
| C6 | 0.053 (4) | 0.086 (7) | 0.061 (4) | −0.022 (5) | 0.010 (4) | −0.010 (5) |
| N1' | 0.052 (3) | 0.056 (3) | 0.047 (2) | −0.011 (2) | 0.0082 (18) | −0.007 (2) |
| C2' | 0.071 (4) | 0.084 (5) | 0.050 (3) | −0.020 (3) | 0.016 (3) | −0.018 (3) |
| C3' | 0.105 (12) | 0.130 (13) | 0.049 (6) | −0.041 (9) | −0.004 (7) | 0.016 (7) |
| C4' | 0.082 (8) | 0.148 (14) | 0.096 (7) | −0.042 (7) | −0.030 (6) | 0.037 (7) |
| C5' | 0.061 (4) | 0.077 (6) | 0.107 (6) | −0.020 (4) | 0.007 (4) | −0.002 (4) |
| C6' | 0.066 (4) | 0.060 (5) | 0.061 (4) | −0.027 (3) | 0.000 (3) | −0.009 (3) |
| S1—C1 | 1.726 (3) | C3—H3A | 0.97 |
| S1—Na1i | 2.9644 (15) | C3—H3B | 0.97 |
| S1—Na1 | 3.0649 (15) | C4—C5 | 1.530 (18) |
| S2—C1 | 1.710 (3) | C4—H4A | 0.97 |
| Na1—O2 | 2.360 (3) | C4—H4B | 0.97 |
| Na1—O1 | 2.385 (2) | C5—C6 | 1.521 (14) |
| Na1—O1ii | 2.416 (3) | C5—H5A | 0.97 |
| Na1—O2iii | 2.515 (2) | C5—H5B | 0.97 |
| Na1—S1iv | 2.9644 (15) | C6—H6A | 0.97 |
| Na1—Na1ii | 3.490 (3) | C6—H6B | 0.97 |
| Na1—Na1iii | 3.644 (3) | N1'—C2' | 1.452 (6) |
| Na1—H12O | 2.67 (3) | N1'—C6' | 1.473 (7) |
| O1—Na1ii | 2.416 (3) | C2'—C3' | 1.495 (19) |
| O1—H11O | 0.839 (17) | C2'—H2'1 | 0.97 |
| O1—H12O | 0.852 (17) | C2'—H2'2 | 0.97 |
| O2—Na1iii | 2.515 (2) | C3'—C4' | 1.50 (3) |
| O2—H21O | 0.834 (17) | C3'—H3'1 | 0.97 |
| O2—H22O | 0.856 (17) | C3'—H3'2 | 0.97 |
| C1—N1' | 1.368 (5) | C4'—C5' | 1.512 (17) |
| C1—N1 | 1.403 (6) | C4'—H4'1 | 0.97 |
| N1—C2 | 1.465 (9) | C4'—H4'2 | 0.97 |
| N1—C6 | 1.489 (10) | C5'—C6' | 1.507 (11) |
| C2—C3 | 1.47 (3) | C5'—H5'1 | 0.97 |
| C2—H2A | 0.97 | C5'—H5'2 | 0.97 |
| C2—H2B | 0.97 | C6'—H6'1 | 0.97 |
| C3—C4 | 1.55 (3) | C6'—H6'2 | 0.97 |
| C1—S1—Na1i | 112.20 (10) | C3—C2—H2A | 108.9 |
| C1—S1—Na1 | 131.13 (10) | N1—C2—H2B | 108.9 |
| Na1i—S1—Na1 | 116.43 (4) | C3—C2—H2B | 108.9 |
| O2—Na1—O1 | 93.59 (8) | H2A—C2—H2B | 107.8 |
| O2—Na1—O1ii | 169.15 (8) | C2—C3—C4 | 108.3 (14) |
| O1—Na1—O1ii | 86.75 (8) | C2—C3—H3A | 110 |
| O2—Na1—O2iii | 83.29 (8) | C4—C3—H3A | 110 |
| O1—Na1—O2iii | 82.36 (7) | C2—C3—H3B | 110 |
| O1ii—Na1—O2iii | 86.01 (8) | C4—C3—H3B | 110 |
| O2—Na1—S1iv | 87.16 (7) | H3A—C3—H3B | 108.4 |
| O1—Na1—S1iv | 166.91 (6) | C5—C4—C3 | 113.1 (13) |
| O1ii—Na1—S1iv | 90.09 (7) | C5—C4—H4A | 109 |
| O2iii—Na1—S1iv | 84.76 (6) | C3—C4—H4A | 109 |
| O2—Na1—S1 | 108.51 (7) | C5—C4—H4B | 109 |
| O1—Na1—S1 | 100.34 (7) | C3—C4—H4B | 109 |
| O1ii—Na1—S1 | 82.06 (7) | H4A—C4—H4B | 107.8 |
| O2iii—Na1—S1 | 167.57 (6) | C6—C5—C4 | 108.2 (9) |
| S1iv—Na1—S1 | 91.78 (4) | C6—C5—H5A | 110.1 |
| O2—Na1—Na1ii | 136.28 (8) | C4—C5—H5A | 110.1 |
| O1—Na1—Na1ii | 43.73 (6) | C6—C5—H5B | 110.1 |
| O1ii—Na1—Na1ii | 43.02 (5) | C4—C5—H5B | 110.1 |
| O2iii—Na1—Na1ii | 82.00 (7) | H5A—C5—H5B | 108.4 |
| S1iv—Na1—Na1ii | 131.81 (6) | N1—C6—C5 | 110.1 (6) |
| S1—Na1—Na1ii | 91.55 (6) | N1—C6—H6A | 109.6 |
| O2—Na1—Na1iii | 43.27 (6) | C5—C6—H6A | 109.6 |
| O1—Na1—Na1iii | 87.06 (7) | N1—C6—H6B | 109.6 |
| O1ii—Na1—Na1iii | 126.00 (8) | C5—C6—H6B | 109.6 |
| O2iii—Na1—Na1iii | 40.02 (5) | H6A—C6—H6B | 108.2 |
| S1iv—Na1—Na1iii | 84.54 (5) | C1—N1'—C2' | 124.6 (4) |
| S1—Na1—Na1iii | 151.58 (5) | C1—N1'—C6' | 122.6 (4) |
| Na1ii—Na1—Na1iii | 111.83 (7) | C2'—N1'—C6' | 111.9 (5) |
| O2—Na1—H12O | 80.3 (6) | N1'—C2'—C3' | 109.4 (7) |
| O1—Na1—H12O | 18.4 (4) | N1'—C2'—H2'1 | 109.8 |
| O1ii—Na1—H12O | 97.4 (7) | C3'—C2'—H2'1 | 109.8 |
| O2iii—Na1—H12O | 68.4 (5) | N1'—C2'—H2'2 | 109.8 |
| S1iv—Na1—H12O | 151.4 (5) | C3'—C2'—H2'2 | 109.8 |
| S1—Na1—H12O | 116.5 (5) | H2'1—C2'—H2'2 | 108.2 |
| Na1ii—Na1—H12O | 56.0 (6) | C2'—C3'—C4' | 116.5 (14) |
| Na1iii—Na1—H12O | 68.7 (4) | C2'—C3'—H3'1 | 108.2 |
| Na1—O1—Na1ii | 93.25 (8) | C4'—C3'—H3'1 | 108.2 |
| Na1—O1—H11O | 129 (2) | C2'—C3'—H3'2 | 108.2 |
| Na1ii—O1—H11O | 97 (3) | C4'—C3'—H3'2 | 108.2 |
| Na1—O1—H12O | 100 (2) | H3'1—C3'—H3'2 | 107.3 |
| Na1ii—O1—H12O | 124 (2) | C3'—C4'—C5' | 106.7 (11) |
| H11O—O1—H12O | 114 (3) | C3'—C4'—H4'1 | 110.4 |
| Na1—O2—Na1iii | 96.71 (8) | C5'—C4'—H4'1 | 110.4 |
| Na1—O2—H21O | 121 (3) | C3'—C4'—H4'2 | 110.4 |
| Na1iii—O2—H21O | 96 (2) | C5'—C4'—H4'2 | 110.4 |
| Na1—O2—H22O | 121 (2) | H4'1—C4'—H4'2 | 108.6 |
| Na1iii—O2—H22O | 106 (2) | C6'—C5'—C4' | 112.5 (7) |
| H21O—O2—H22O | 111 (2) | C6'—C5'—H5'1 | 109.1 |
| N1'—C1—N1 | 40.3 (3) | C4'—C5'—H5'1 | 109.1 |
| N1'—C1—S2 | 117.2 (3) | C6'—C5'—H5'2 | 109.1 |
| N1—C1—S2 | 117.4 (3) | C4'—C5'—H5'2 | 109.1 |
| N1'—C1—S1 | 118.6 (3) | H5'1—C5'—H5'2 | 107.8 |
| N1—C1—S1 | 116.2 (3) | N1'—C6'—C5' | 110.6 (5) |
| S2—C1—S1 | 121.25 (16) | N1'—C6'—H6'1 | 109.5 |
| C1—N1—C2 | 123.5 (5) | C5'—C6'—H6'1 | 109.5 |
| C1—N1—C6 | 123.9 (6) | N1'—C6'—H6'2 | 109.5 |
| C2—N1—C6 | 111.0 (6) | C5'—C6'—H6'2 | 109.5 |
| N1—C2—C3 | 113.2 (13) | H6'1—C6'—H6'2 | 108.1 |
| N1—C2—H2A | 108.9 | ||
| C1—S1—Na1—O2 | 38.84 (16) | Na1i—S1—C1—S2 | −10.8 (2) |
| Na1i—S1—Na1—O2 | −135.11 (7) | Na1—S1—C1—S2 | 175.08 (10) |
| C1—S1—Na1—O1 | −58.52 (16) | N1'—C1—N1—C2 | −89.0 (9) |
| Na1i—S1—Na1—O1 | 127.53 (7) | S2—C1—N1—C2 | 11.7 (9) |
| C1—S1—Na1—O1ii | −143.72 (15) | S1—C1—N1—C2 | 166.8 (6) |
| Na1i—S1—Na1—O1ii | 42.34 (6) | N1'—C1—N1—C6 | 75.0 (8) |
| C1—S1—Na1—O2iii | −160.0 (3) | S2—C1—N1—C6 | 175.6 (6) |
| Na1i—S1—Na1—O2iii | 26.0 (3) | S1—C1—N1—C6 | −29.3 (9) |
| C1—S1—Na1—S1iv | 126.44 (14) | C1—N1—C2—C3 | 104.9 (12) |
| Na1i—S1—Na1—S1iv | −47.50 (6) | C6—N1—C2—C3 | −60.8 (14) |
| C1—S1—Na1—Na1ii | −101.64 (15) | N1—C2—C3—C4 | 55 (2) |
| Na1i—S1—Na1—Na1ii | 84.41 (5) | C2—C3—C4—C5 | −53 (2) |
| C1—S1—Na1—Na1iii | 44.63 (19) | C3—C4—C5—C6 | 54.8 (15) |
| Na1i—S1—Na1—Na1iii | −129.32 (11) | C1—N1—C6—C5 | −105.1 (9) |
| O2—Na1—O1—Na1ii | 169.13 (8) | C2—N1—C6—C5 | 60.6 (11) |
| O1ii—Na1—O1—Na1ii | 0 | C4—C5—C6—N1 | −57.2 (11) |
| O2iii—Na1—O1—Na1ii | 86.40 (8) | N1—C1—N1'—C2' | 90.7 (8) |
| S1iv—Na1—O1—Na1ii | 76.2 (3) | S2—C1—N1'—C2' | −10.6 (7) |
| S1—Na1—O1—Na1ii | −81.31 (7) | S1—C1—N1'—C2' | −171.6 (4) |
| Na1iii—Na1—O1—Na1ii | 126.33 (8) | N1—C1—N1'—C6' | −77.5 (6) |
| O1—Na1—O2—Na1iii | −81.86 (8) | S2—C1—N1'—C6' | −178.7 (4) |
| O1ii—Na1—O2—Na1iii | 9.6 (5) | S1—C1—N1'—C6' | 20.2 (7) |
| O2iii—Na1—O2—Na1iii | 0 | C1—N1'—C2'—C3' | −113.5 (12) |
| S1iv—Na1—O2—Na1iii | 85.05 (6) | C6'—N1'—C2'—C3' | 55.7 (13) |
| S1—Na1—O2—Na1iii | 175.98 (6) | N1'—C2'—C3'—C4' | −55 (2) |
| Na1ii—Na1—O2—Na1iii | −70.99 (11) | C2'—C3'—C4'—C5' | 52.4 (19) |
| Na1i—S1—C1—N1' | 149.5 (3) | C3'—C4'—C5'—C6' | −52.4 (15) |
| Na1—S1—C1—N1' | −24.6 (4) | C1—N1'—C6'—C5' | 110.7 (7) |
| Na1i—S1—C1—N1 | −164.9 (4) | C2'—N1'—C6'—C5' | −58.7 (9) |
| Na1—S1—C1—N1 | 21.0 (5) | C4'—C5'—C6'—N1' | 57.7 (11) |
| H··· | ||||
| O1—H11O···S2v | 0.84 (2) | 2.39 (2) | 3.214 (2) | 167 (3) |
| O1—H12O···S1vi | 0.85 (2) | 2.49 (2) | 3.322 (3) | 167 (3) |
| O2—H21O···S2vi | 0.83 (2) | 2.48 (2) | 3.283 (2) | 163 (3) |
| O2—H22O···S1vii | 0.86 (2) | 2.46 (2) | 3.313 (2) | 174 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H11 | 0.84 (2) | 2.39 (2) | 3.214 (2) | 167 (3) |
| O1—H12 | 0.85 (2) | 2.49 (2) | 3.322 (3) | 167 (3) |
| O2—H21 | 0.83 (2) | 2.48 (2) | 3.283 (2) | 163 (3) |
| O2—H22 | 0.86 (2) | 2.46 (2) | 3.313 (2) | 174 (3) |
Symmetry codes: (i) ; (ii) ; (iii) .