Literature DB >> 22058997

(E)-1-(Pyridin-2-yl)-3-(3,4,5-trimeth-oxy-phen-yl)prop-2-en-1-one.

Hoong-Kun Fun, Thitipone Suwunwong, Suchada Chantrapromma.   

Abstract

In the title heteroaryl chalcone derivative, C(17)H(17)NO(4), the dihedral angle between the pyridine and benzene rings is 10.82 (5)°. The two meth-oxy groups at the meta positions are essentially coplanar with the attached benzene rings [C-O-C-C torsion angles = -0.97 (14) and 179.47 (9)°], whereas the meth-oxy group at the para position is twisted from the attached ring with a C-O-C-C torsion angle of -104.48 (11)°. A C-H⋯O close contact involving two of the meth-oxy groups generates an S(6) ring motif. In the crystal, mol-ecules are linked by weak C-H⋯O inter-actions into columns along the b axis.

Entities:  

Year:  2011        PMID: 22058997      PMCID: PMC3200663          DOI: 10.1107/S1600536811033198

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background and applications of chalcones, see: Gacche et al. (2008 ▶); Isomoto et al. (2005 ▶); Jung et al. (2008 ▶); Nowakowska et al. (2001 ▶); Patil & Dharmaprakash (2008 ▶); Shibata (1994 ▶); Tewtrakul et al. (2003 ▶). For standard bond-length data, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For related structures, see: Fun et al. (2010 ▶); Suwunwong, Chantrapromma & Fun (2009 ▶); Suwunwong, Chantrapromma, Pakdeevanich & Fun (2009 ▶). For the stability of the temperature controller used in the data collection, see Cosier & Glazer, (1986 ▶).

Experimental

Crystal data

C17H17NO4 M = 299.32 Orthorhombic, a = 25.0498 (5) Å b = 3.9799 (1) Å c = 14.3267 (3) Å V = 1428.31 (5) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.58 × 0.41 × 0.32 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.945, T max = 0.969 26700 measured reflections 3245 independent reflections 3130 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.091 S = 1.08 3245 reflections 202 parameters 1 restraint H-atom parameters constrained Δρmax = 0.37 e Å−3 Δρmin = −0.21 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811033198/lh5312sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811033198/lh5312Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811033198/lh5312Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H17NO4Dx = 1.392 Mg m3
Mr = 299.32Melting point = 434–435 K
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 3245 reflections
a = 25.0498 (5) Åθ = 2.2–35.0°
b = 3.9799 (1) ŵ = 0.10 mm1
c = 14.3267 (3) ÅT = 100 K
V = 1428.31 (5) Å3Block, pale yellow
Z = 40.58 × 0.41 × 0.32 mm
F(000) = 632
Bruker APEXII CCD area-detector diffractometer3245 independent reflections
Radiation source: sealed tube3130 reflections with I > 2σ(I)
graphiteRint = 0.026
φ and ω scansθmax = 35.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −34→40
Tmin = 0.945, Tmax = 0.969k = −6→6
26700 measured reflectionsl = −23→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.033Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.091H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0634P)2 + 0.087P] where P = (Fo2 + 2Fc2)/3
3245 reflections(Δ/σ)max = 0.001
202 parametersΔρmax = 0.37 e Å3
1 restraintΔρmin = −0.21 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 120.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.24601 (4)−0.1060 (3)0.05761 (7)0.02596 (19)
O20.08957 (3)0.0024 (2)0.50009 (5)0.01754 (15)
O30.00155 (3)0.3315 (2)0.44825 (6)0.01804 (15)
O4−0.01556 (3)0.5094 (2)0.26892 (6)0.01841 (15)
C40.23610 (4)−0.0027 (3)−0.13617 (8)0.01727 (17)
H4A0.2657−0.1252−0.11670.021*
C30.22725 (5)0.0591 (3)−0.23046 (8)0.01872 (18)
H3A0.2504−0.0255−0.27540.022*
C20.18322 (5)0.2495 (3)−0.25613 (7)0.01913 (18)
H2A0.17660.2978−0.31860.023*
C10.14921 (4)0.3668 (3)−0.18655 (8)0.01865 (19)
H1A0.11980.4947−0.20420.022*
N10.15656 (4)0.3053 (2)−0.09560 (6)0.01632 (16)
C50.19958 (4)0.1232 (2)−0.07164 (7)0.01393 (16)
C60.20623 (4)0.0461 (3)0.03063 (7)0.01630 (17)
C70.16244 (4)0.1520 (3)0.09225 (7)0.01565 (17)
H7A0.13540.28800.06870.019*
C80.16076 (4)0.0553 (3)0.18220 (7)0.01548 (16)
H8A0.1893−0.07240.20370.019*
C90.11859 (4)0.1310 (3)0.24945 (7)0.01371 (16)
C100.12577 (4)0.0284 (3)0.34211 (7)0.01412 (16)
H10A0.1570−0.08160.35960.017*
C110.08615 (4)0.0913 (2)0.40822 (6)0.01337 (16)
C120.03898 (4)0.2565 (3)0.38196 (7)0.01385 (15)
C130.03186 (4)0.3557 (2)0.28851 (7)0.01376 (16)
C140.07153 (4)0.2953 (3)0.22275 (7)0.01422 (16)
H14A0.06690.36380.16120.017*
C150.13684 (5)−0.1702 (3)0.52820 (8)0.01924 (18)
H15A0.1339−0.23240.59270.029*
H15B0.1672−0.02580.51990.029*
H15C0.1412−0.36860.49090.029*
C16−0.04469 (5)0.1175 (3)0.44731 (9)0.02059 (19)
H16A−0.07270.21960.48310.031*
H16B−0.0357−0.09640.47400.031*
H16C−0.05650.08640.38410.031*
C17−0.02386 (5)0.6161 (3)0.17457 (8)0.01905 (19)
H17A−0.05800.72450.16950.029*
H17B−0.02290.42440.13390.029*
H17C0.00380.77090.15700.029*
U11U22U33U12U13U23
O10.0183 (4)0.0404 (5)0.0192 (4)0.0113 (3)0.0019 (3)0.0060 (4)
O20.0191 (4)0.0228 (4)0.0107 (3)0.0004 (3)−0.0005 (2)0.0022 (2)
O30.0168 (3)0.0225 (3)0.0148 (3)−0.0011 (3)0.0040 (3)−0.0044 (3)
O40.0152 (3)0.0256 (4)0.0144 (3)0.0049 (3)0.0000 (3)0.0018 (3)
C40.0158 (4)0.0190 (4)0.0171 (4)0.0019 (3)0.0036 (3)0.0001 (3)
C30.0215 (5)0.0190 (4)0.0157 (4)−0.0015 (3)0.0065 (4)−0.0015 (3)
C20.0220 (5)0.0218 (4)0.0136 (4)−0.0027 (4)0.0009 (3)0.0001 (3)
C10.0178 (4)0.0238 (5)0.0144 (4)0.0007 (3)−0.0011 (3)0.0019 (3)
N10.0134 (3)0.0218 (4)0.0137 (3)0.0011 (3)0.0000 (3)0.0012 (3)
C50.0126 (4)0.0168 (4)0.0124 (3)−0.0001 (3)0.0017 (3)0.0006 (3)
C60.0136 (4)0.0210 (4)0.0143 (4)0.0013 (3)0.0012 (3)0.0012 (3)
C70.0140 (4)0.0203 (4)0.0126 (3)0.0018 (3)0.0013 (3)0.0003 (3)
C80.0146 (4)0.0188 (4)0.0131 (4)0.0012 (3)0.0006 (3)0.0003 (3)
C90.0132 (4)0.0162 (4)0.0117 (3)−0.0009 (3)0.0002 (3)0.0000 (3)
C100.0133 (4)0.0178 (4)0.0112 (3)0.0003 (3)−0.0006 (3)0.0003 (3)
C110.0149 (4)0.0149 (4)0.0103 (3)−0.0014 (3)−0.0004 (3)−0.0001 (3)
C120.0144 (4)0.0157 (4)0.0114 (3)−0.0005 (3)0.0003 (3)−0.0014 (3)
C130.0129 (4)0.0157 (4)0.0127 (3)0.0003 (3)−0.0005 (3)−0.0011 (3)
C140.0130 (4)0.0179 (4)0.0118 (3)−0.0001 (3)−0.0001 (3)0.0003 (3)
C150.0227 (5)0.0193 (4)0.0157 (4)−0.0006 (3)−0.0038 (4)0.0031 (3)
C160.0180 (4)0.0202 (4)0.0235 (5)−0.0009 (3)0.0060 (4)0.0008 (4)
C170.0177 (4)0.0226 (5)0.0168 (4)0.0018 (3)−0.0027 (3)0.0038 (3)
O1—C61.2285 (13)C7—H7A0.9300
O2—C111.3656 (12)C8—C91.4611 (14)
O2—C151.4269 (14)C8—H8A0.9300
O3—C121.3676 (12)C9—C101.4005 (14)
O3—C161.4376 (14)C9—C141.4013 (14)
O4—C131.3654 (13)C10—C111.3946 (14)
O4—C171.4320 (14)C10—H10A0.9300
C4—C31.3909 (16)C11—C121.4034 (14)
C4—C51.3938 (14)C12—C131.4072 (13)
C4—H4A0.9300C13—C141.3904 (14)
C3—C21.3877 (17)C14—H14A0.9300
C3—H3A0.9300C15—H15A0.9600
C2—C11.3918 (16)C15—H15B0.9600
C2—H2A0.9300C15—H15C0.9600
C1—N11.3386 (14)C16—H16A0.9600
C1—H1A0.9300C16—H16B0.9600
N1—C51.3434 (13)C16—H16C0.9600
C5—C61.5061 (14)C17—H17A0.9600
C6—C71.4697 (14)C17—H17B0.9600
C7—C81.3456 (14)C17—H17C0.9600
C11—O2—C15116.68 (9)C11—C10—H10A120.0
C12—O3—C16114.63 (8)C9—C10—H10A120.0
C13—O4—C17116.95 (8)O2—C11—C10124.28 (9)
C3—C4—C5118.42 (10)O2—C11—C12115.64 (9)
C3—C4—H4A120.8C10—C11—C12120.08 (9)
C5—C4—H4A120.8O3—C12—C11119.55 (9)
C2—C3—C4118.73 (9)O3—C12—C13120.83 (9)
C2—C3—H3A120.6C11—C12—C13119.56 (9)
C4—C3—H3A120.6O4—C13—C14124.05 (9)
C3—C2—C1118.68 (10)O4—C13—C12115.58 (8)
C3—C2—H2A120.7C14—C13—C12120.37 (9)
C1—C2—H2A120.7C13—C14—C9119.80 (9)
N1—C1—C2123.48 (10)C13—C14—H14A120.1
N1—C1—H1A118.3C9—C14—H14A120.1
C2—C1—H1A118.3O2—C15—H15A109.5
C1—N1—C5117.24 (9)O2—C15—H15B109.5
N1—C5—C4123.44 (9)H15A—C15—H15B109.5
N1—C5—C6116.56 (8)O2—C15—H15C109.5
C4—C5—C6119.96 (9)H15A—C15—H15C109.5
O1—C6—C7123.89 (10)H15B—C15—H15C109.5
O1—C6—C5119.75 (10)O3—C16—H16A109.5
C7—C6—C5116.32 (9)O3—C16—H16B109.5
C8—C7—C6121.12 (9)H16A—C16—H16B109.5
C8—C7—H7A119.4O3—C16—H16C109.5
C6—C7—H7A119.4H16A—C16—H16C109.5
C7—C8—C9126.53 (9)H16B—C16—H16C109.5
C7—C8—H8A116.7O4—C17—H17A109.5
C9—C8—H8A116.7O4—C17—H17B109.5
C10—C9—C14120.19 (9)H17A—C17—H17B109.5
C10—C9—C8118.17 (9)O4—C17—H17C109.5
C14—C9—C8121.63 (9)H17A—C17—H17C109.5
C11—C10—C9120.00 (9)H17B—C17—H17C109.5
C5—C4—C3—C21.43 (16)C15—O2—C11—C12179.12 (9)
C4—C3—C2—C1−0.96 (17)C9—C10—C11—O2−179.72 (9)
C3—C2—C1—N1−0.13 (18)C9—C10—C11—C120.18 (15)
C2—C1—N1—C50.71 (17)C16—O3—C12—C11−104.48 (11)
C1—N1—C5—C4−0.19 (15)C16—O3—C12—C1378.28 (12)
C1—N1—C5—C6−177.94 (10)O2—C11—C12—O33.10 (14)
C3—C4—C5—N1−0.88 (16)C10—C11—C12—O3−176.82 (9)
C3—C4—C5—C6176.80 (10)O2—C11—C12—C13−179.63 (8)
N1—C5—C6—O1−176.67 (11)C10—C11—C12—C130.45 (14)
C4—C5—C6—O15.50 (16)C17—O4—C13—C14−0.67 (15)
N1—C5—C6—C75.36 (14)C17—O4—C13—C12179.47 (9)
C4—C5—C6—C7−172.47 (10)O3—C12—C13—O4−3.86 (14)
O1—C6—C7—C8−7.16 (18)C11—C12—C13—O4178.91 (9)
C5—C6—C7—C8170.72 (10)O3—C12—C13—C14176.28 (9)
C6—C7—C8—C9−177.30 (10)C11—C12—C13—C14−0.96 (14)
C7—C8—C9—C10−175.49 (10)O4—C13—C14—C9−179.04 (9)
C7—C8—C9—C145.80 (17)C12—C13—C14—C90.81 (14)
C14—C9—C10—C11−0.33 (15)C10—C9—C14—C13−0.16 (15)
C8—C9—C10—C11−179.06 (9)C8—C9—C14—C13178.52 (9)
C15—O2—C11—C10−0.97 (14)
D—H···AD—HH···AD···AD—H···A
C16—H16B···O3i0.962.493.3358 (14)147
C16—H16C···O40.962.573.0817 (15)113
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C16—H16B⋯O3i0.962.493.3358 (14)147
C16—H16C⋯O40.962.573.0817 (15)113

Symmetry code: (i) .

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1.  A short history of SHELX.

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Authors:  R N Gacche; N A Dhole; S G Kamble; B P Bandgar
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5.  (E)-1-(2-Thien-yl)-3-(3,4,5-trimethoxy-phen-yl)prop-2-en-1-one.

Authors:  Thitipone Suwunwong; Suchada Chantrapromma; Paradorn Pakdeevanich; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-13

6.  (E)-1-(4-Bromo-phen-yl)-3-(3,4,5-trimethoxy-phen-yl)prop-2-en-1-one.

Authors:  Thitipone Suwunwong; Suchada Chantrapromma; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-13

7.  Anti-tumorigenic chalcones.

Authors:  S Shibata
Journal:  Stem Cells       Date:  1994-01       Impact factor: 6.277

8.  (E)-1-(2-Fur-yl)-3-(3,4,5-trimeth-oxy-phen-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Thitipone Suwunwong; Suchada Chantrapromma; Chatchanok Karalai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-06

9.  Structure validation in chemical crystallography.

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  2 in total

1.  (2E)-1-(Pyridin-2-yl)-3-(2,4,6-trimeth-oxy-phen-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Suchada Chantrapromma; Thitipone Suwunwong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30

2.  (2E)-1-(Pyridin-2-yl)-3-(2,4,5-tri-meth-oxy-phen-yl)prop-2-en-1-one.

Authors:  Suchada Chantrapromma; Thitipone Suwunwong; Nawong Boonnak; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-06-12
  2 in total

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