Literature DB >> 22065835

(2E)-1-(Pyridin-2-yl)-3-(2,4,6-trimeth-oxy-phen-yl)prop-2-en-1-one.

Hoong-Kun Fun, Suchada Chantrapromma, Thitipone Suwunwong.   

Abstract

The title heteroaryl chalcone derivative, C(17)H(17)NO(4), is a condensation product of 2-acetyl-pyridine and 2,4,6-trimeth-oxy-benzaldehyde. The mol-ecule is roughly planar, the dihedral angle between the pyridine and benzene rings being 5.51 (10)°. All the three meth-oxy groups are almost co-planar with the bound benzene ring [r.m.s. deviation of 0.0306 (2) Å]. A weak C-H⋯O intra-molecular inter-action involving one of the ortho-meth-oxy groups generates an S(6) ring motif. In the crystal, the mol-ecules are linked by weak C-H⋯O inter-actions into anti-parallel face-to-face pairs. Adjacent pairs are further connected into sheets parallel to the ab plane.

Entities:  

Year:  2011        PMID: 22065835      PMCID: PMC3201482          DOI: 10.1107/S1600536811039110

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For related structures, see: Chantrapromma et al. (2009 ▶); Fun et al. (2010 ▶, 2011 ▶). For background to and applications of chalcones and heteroaryl chalcones, see: Bandgar et al. (2010 ▶); Gacche et al. (2008 ▶); Go et al. (2005 ▶); Isomoto et al. (2005 ▶); Jung et al. (2008 ▶); Suwunwong et al. (2011 ▶); Tewtrakul et al. (2003 ▶). For the stability of the temperature controller used in the data collection, see Cosier & Glazer, (1986 ▶).

Experimental

Crystal data

C17H17NO4 M = 299.32 Orthorhombic, a = 31.563 (2) Å b = 44.508 (3) Å c = 3.9504 (3) Å V = 5549.6 (7) Å3 Z = 16 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.58 × 0.14 × 0.04 mm

Data collection

Bruker APEXII CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.943, T max = 0.996 31465 measured reflections 2309 independent reflections 1908 reflections with I > 2σ(I) R int = 0.100

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.105 S = 1.09 2309 reflections 267 parameters 1 restraint All H-atom parameters refined Δρmax = 0.23 e Å−3 Δρmin = −0.27 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811039110/rz2642sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811039110/rz2642Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811039110/rz2642Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H17NO4Dx = 1.433 Mg m3
Mr = 299.32Melting point = 392–393 K
Orthorhombic, Fdd2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: F 2 -2dCell parameters from 2309 reflections
a = 31.563 (2) Åθ = 1.6–30.0°
b = 44.508 (3) ŵ = 0.10 mm1
c = 3.9504 (3) ÅT = 100 K
V = 5549.6 (7) Å3Plate, pale yellow
Z = 160.58 × 0.14 × 0.04 mm
F(000) = 2528
Bruker APEXII CCD area detector diffractometer2309 independent reflections
Radiation source: sealed tube1908 reflections with I > 2σ(I)
graphiteRint = 0.100
φ and ω scansθmax = 30.0°, θmin = 1.6°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −44→44
Tmin = 0.943, Tmax = 0.996k = −62→62
31465 measured reflectionsl = −5→5
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105All H-atom parameters refined
S = 1.09w = 1/[σ2(Fo2) + (0.0467P)2 + 4.8268P] where P = (Fo2 + 2Fc2)/3
2309 reflections(Δ/σ)max = 0.001
267 parametersΔρmax = 0.23 e Å3
1 restraintΔρmin = −0.27 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 120.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.18610 (5)0.11217 (3)1.2030 (5)0.0298 (4)
O20.07115 (4)0.04799 (3)1.1758 (5)0.0239 (3)
O30.05980 (4)−0.04831 (3)0.6752 (5)0.0248 (4)
O40.19307 (4)0.00496 (3)0.6918 (5)0.0242 (4)
N10.27419 (5)0.08486 (4)0.7393 (6)0.0245 (4)
C10.31419 (7)0.09271 (5)0.6662 (7)0.0263 (5)
C20.33299 (7)0.11932 (5)0.7701 (7)0.0266 (5)
C30.30912 (7)0.13912 (5)0.9612 (7)0.0270 (5)
C40.26779 (7)0.13153 (5)1.0406 (7)0.0254 (5)
C50.25139 (6)0.10419 (4)0.9256 (7)0.0225 (4)
C60.20685 (6)0.09511 (4)1.0251 (7)0.0226 (4)
C70.19132 (7)0.06578 (4)0.9048 (7)0.0228 (4)
C80.15391 (7)0.05521 (4)1.0129 (7)0.0228 (4)
C90.13222 (6)0.02737 (4)0.9251 (6)0.0213 (4)
C100.08883 (6)0.02411 (4)1.0100 (6)0.0217 (4)
C110.06569 (6)−0.00125 (4)0.9267 (7)0.0225 (4)
C120.08555 (6)−0.02465 (4)0.7554 (6)0.0216 (4)
C130.12828 (6)−0.02332 (4)0.6760 (7)0.0220 (4)
C140.15094 (6)0.00253 (4)0.7601 (6)0.0217 (4)
C150.02726 (7)0.04603 (5)1.2600 (7)0.0252 (5)
C160.07863 (7)−0.07331 (5)0.5027 (7)0.0259 (5)
C170.21410 (7)−0.02095 (5)0.5537 (7)0.0261 (5)
H1A0.3305 (7)0.0785 (5)0.524 (8)0.023 (6)*
H2A0.3622 (7)0.1239 (5)0.708 (9)0.027 (6)*
H3A0.3216 (7)0.1581 (5)1.051 (8)0.025 (6)*
H4A0.2489 (7)0.1445 (5)1.187 (9)0.030 (7)*
H8A0.1375 (8)0.0676 (6)1.166 (9)0.039 (8)*
H11A0.0350 (7)−0.0029 (5)0.980 (8)0.023 (6)*
H11B0.2095 (7)0.0554 (5)0.747 (9)0.025 (6)*
H13A0.1415 (7)−0.0402 (5)0.545 (8)0.025 (6)*
H15A0.0101 (8)0.0457 (6)1.054 (9)0.033 (8)*
H15B0.0223 (8)0.0281 (6)1.428 (10)0.038 (7)*
H15C0.0194 (7)0.0634 (5)1.389 (8)0.024 (7)*
H16A0.0549 (7)−0.0874 (5)0.453 (8)0.023 (6)*
H16B0.0916 (7)−0.0668 (5)0.282 (9)0.023 (6)*
H16C0.1003 (8)−0.0827 (5)0.644 (9)0.031 (7)*
H17A0.2010 (8)−0.0257 (6)0.328 (9)0.030 (8)*
H17B0.2445 (7)−0.0160 (5)0.542 (8)0.025 (6)*
H17C0.2105 (7)−0.0383 (5)0.714 (9)0.028 (7)*
U11U22U33U12U13U23
O10.0320 (8)0.0216 (7)0.0360 (11)−0.0005 (6)0.0043 (8)−0.0058 (8)
O20.0246 (7)0.0189 (6)0.0283 (9)0.0001 (5)0.0026 (7)−0.0024 (7)
O30.0251 (7)0.0175 (6)0.0317 (10)−0.0026 (5)0.0018 (7)−0.0032 (7)
O40.0236 (7)0.0194 (6)0.0295 (10)−0.0009 (5)0.0026 (7)−0.0034 (7)
N10.0284 (9)0.0189 (8)0.0264 (11)0.0003 (6)−0.0011 (8)−0.0007 (8)
C10.0279 (10)0.0233 (9)0.0276 (13)0.0008 (8)0.0002 (10)0.0019 (10)
C20.0290 (11)0.0239 (9)0.0270 (13)−0.0012 (8)−0.0014 (10)0.0061 (10)
C30.0320 (11)0.0203 (9)0.0288 (14)−0.0037 (8)−0.0050 (11)0.0023 (10)
C40.0313 (11)0.0197 (9)0.0251 (12)−0.0004 (8)−0.0021 (10)0.0009 (9)
C50.0274 (10)0.0188 (9)0.0214 (11)−0.0013 (7)−0.0012 (9)0.0033 (9)
C60.0267 (10)0.0185 (9)0.0224 (11)0.0004 (7)−0.0010 (9)0.0029 (9)
C70.0278 (10)0.0162 (9)0.0242 (12)0.0008 (7)−0.0007 (9)0.0012 (9)
C80.0266 (10)0.0173 (8)0.0245 (12)0.0013 (7)−0.0014 (9)0.0017 (9)
C90.0258 (10)0.0181 (9)0.0200 (12)0.0013 (7)−0.0009 (9)0.0019 (9)
C100.0287 (10)0.0162 (8)0.0201 (11)0.0015 (7)−0.0017 (9)0.0011 (9)
C110.0233 (9)0.0195 (9)0.0248 (12)0.0001 (7)0.0002 (9)0.0027 (9)
C120.0287 (10)0.0156 (8)0.0206 (12)−0.0024 (7)−0.0039 (9)0.0021 (8)
C130.0263 (10)0.0176 (8)0.0220 (12)−0.0009 (7)−0.0012 (9)−0.0009 (9)
C140.0245 (10)0.0191 (9)0.0214 (12)0.0007 (7)−0.0014 (9)0.0028 (9)
C150.0247 (10)0.0231 (9)0.0279 (13)0.0018 (8)0.0003 (10)−0.0022 (10)
C160.0305 (11)0.0179 (9)0.0292 (13)−0.0016 (8)−0.0011 (10)−0.0026 (10)
C170.0264 (11)0.0194 (9)0.0325 (14)0.0009 (8)0.0045 (10)−0.0029 (10)
O1—C61.224 (3)C7—H11B0.96 (3)
O2—C101.368 (2)C8—C91.458 (3)
O2—C151.427 (3)C8—H8A0.97 (3)
O3—C121.367 (2)C9—C141.413 (3)
O3—C161.434 (3)C9—C101.417 (3)
O4—C141.361 (2)C10—C111.384 (3)
O4—C171.438 (3)C11—C121.392 (3)
N1—C51.341 (3)C11—H11A0.99 (2)
N1—C11.342 (3)C12—C131.386 (3)
C1—C21.387 (3)C13—C141.395 (3)
C1—H1A0.99 (3)C13—H13A1.00 (3)
C2—C31.383 (3)C15—H15A0.98 (3)
C2—H2A0.97 (2)C15—H15B1.05 (3)
C3—C41.384 (3)C15—H15C0.96 (3)
C3—H3A1.00 (2)C16—H16A1.00 (2)
C4—C51.398 (3)C16—H16B1.01 (3)
C4—H4A1.01 (3)C16—H16C0.98 (3)
C5—C61.515 (3)C17—H17A1.01 (3)
C6—C71.474 (3)C17—H17B0.99 (2)
C7—C81.341 (3)C17—H17C1.00 (3)
C10—O2—C15117.39 (16)O2—C10—C9115.35 (17)
C12—O3—C16117.48 (16)C11—C10—C9122.49 (19)
C14—O4—C17117.55 (16)C10—C11—C12119.22 (19)
C5—N1—C1117.13 (18)C10—C11—H11A121.7 (14)
N1—C1—C2124.1 (2)C12—C11—H11A119.1 (14)
N1—C1—H1A116.3 (13)O3—C12—C13123.98 (18)
C2—C1—H1A119.5 (13)O3—C12—C11114.91 (18)
C3—C2—C1118.2 (2)C13—C12—C11121.11 (18)
C3—C2—H2A121.2 (15)C12—C13—C14118.69 (19)
C1—C2—H2A120.6 (15)C12—C13—H13A119.3 (13)
C2—C3—C4118.8 (2)C14—C13—H13A121.8 (13)
C2—C3—H3A121.3 (14)O4—C14—C13121.27 (19)
C4—C3—H3A119.8 (14)O4—C14—C9115.97 (17)
C3—C4—C5119.2 (2)C13—C14—C9122.75 (18)
C3—C4—H4A123.1 (13)O2—C15—H15A110.2 (17)
C5—C4—H4A117.7 (13)O2—C15—H15B109.8 (14)
N1—C5—C4122.54 (19)H15A—C15—H15B115 (2)
N1—C5—C6117.99 (17)O2—C15—H15C109.0 (14)
C4—C5—C6119.4 (2)H15A—C15—H15C108 (2)
O1—C6—C7123.82 (19)H15B—C15—H15C104 (2)
O1—C6—C5118.70 (18)O3—C16—H16A105.8 (14)
C7—C6—C5117.47 (19)O3—C16—H16B111.0 (14)
C8—C7—C6120.1 (2)H16A—C16—H16B108 (2)
C8—C7—H11B124.1 (14)O3—C16—H16C110.5 (17)
C6—C7—H11B115.8 (14)H16A—C16—H16C112 (2)
C7—C8—C9129.5 (2)H16B—C16—H16C109 (2)
C7—C8—H8A118.2 (15)O4—C17—H17A108.4 (15)
C9—C8—H8A112.3 (15)O4—C17—H17B106.7 (14)
C14—C9—C10115.68 (17)H17A—C17—H17B114 (2)
C14—C9—C8125.35 (18)O4—C17—H17C109.0 (16)
C10—C9—C8118.97 (18)H17A—C17—H17C111 (2)
O2—C10—C11122.16 (18)H17B—C17—H17C108 (2)
C5—N1—C1—C2−0.2 (4)C8—C9—C10—O2−1.0 (3)
N1—C1—C2—C30.0 (4)C14—C9—C10—C11−2.2 (3)
C1—C2—C3—C40.1 (4)C8—C9—C10—C11178.1 (2)
C2—C3—C4—C5−0.1 (4)O2—C10—C11—C12179.5 (2)
C1—N1—C5—C40.3 (3)C9—C10—C11—C120.5 (4)
C1—N1—C5—C6−177.1 (2)C16—O3—C12—C130.9 (3)
C3—C4—C5—N1−0.1 (4)C16—O3—C12—C11−179.1 (2)
C3—C4—C5—C6177.2 (2)C10—C11—C12—O3−178.1 (2)
N1—C5—C6—O1178.0 (2)C10—C11—C12—C131.9 (4)
C4—C5—C6—O10.5 (3)O3—C12—C13—C14177.6 (2)
N1—C5—C6—C7−1.1 (3)C11—C12—C13—C14−2.3 (3)
C4—C5—C6—C7−178.5 (2)C17—O4—C14—C13−4.7 (3)
O1—C6—C7—C8−5.8 (4)C17—O4—C14—C9174.2 (2)
C5—C6—C7—C8173.2 (2)C12—C13—C14—O4179.2 (2)
C6—C7—C8—C9179.0 (2)C12—C13—C14—C90.4 (3)
C7—C8—C9—C1414.7 (4)C10—C9—C14—O4−177.1 (2)
C7—C8—C9—C10−165.6 (2)C8—C9—C14—O42.6 (3)
C15—O2—C10—C11−0.4 (3)C10—C9—C14—C131.8 (3)
C15—O2—C10—C9178.7 (2)C8—C9—C14—C13−178.6 (2)
C14—C9—C10—O2178.7 (2)
D—H···AD—HH···AD···AD—H···A
C3—H3A···O2i1.00 (2)2.45 (3)3.369 (2)157.8 (17)
C7—H11B···O40.97 (3)2.31 (2)2.835 (2)113.1 (18)
C17—H17B···O4ii0.99 (2)2.46 (2)3.337 (3)148 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3A⋯O2i1.00 (2)2.45 (3)3.369 (2)157.8 (17)
C7—H11B⋯O40.97 (3)2.31 (2)2.835 (2)113.1 (18)
C17—H17B⋯O4ii0.99 (2)2.46 (2)3.337 (3)148 (2)

Symmetry codes: (i) ; (ii) .

  9 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 2.  Chalcones: an update on cytotoxic and chemoprotective properties.

Authors:  M L Go; X Wu; X L Liu
Journal:  Curr Med Chem       Date:  2005       Impact factor: 4.530

3.  Sofalcone, a mucoprotective agent, increases the cure rate of Helicobacter pylori infection when combined with rabeprazole, amoxicillin and clarithromycin.

Authors:  Hajime Isomoto; Hisashi Furusu; Ken Ohnita; Chun-Yang Wen; Kenichiro Inoue; Shigeru Kohno
Journal:  World J Gastroenterol       Date:  2005-03-21       Impact factor: 5.742

4.  In-vitro evaluation of selected chalcones for antioxidant activity.

Authors:  R N Gacche; N A Dhole; S G Kamble; B P Bandgar
Journal:  J Enzyme Inhib Med Chem       Date:  2008-02       Impact factor: 5.051

5.  (E)-1-(2-Fur-yl)-3-(2,4,6-trimeth-oxy-phen-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Thitipone Suwunwong; Suchada Chantrapromma; Chatchanok Karalai
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-15

6.  (E)-1-(4-Bromo-phen-yl)-3-(2,4,6-trimethoxy-phen-yl)prop-2-en-1-one.

Authors:  Suchada Chantrapromma; Thitipone Suwunwong; Chatchanok Karalai; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-28

7.  Synthesis and biological evaluation of simple methoxylated chalcones as anticancer, anti-inflammatory and antioxidant agents.

Authors:  Babasaheb P Bandgar; Shrikant S Gawande; Ragini G Bodade; Jalinder V Totre; Chandrahas N Khobragade
Journal:  Bioorg Med Chem       Date:  2009-12-06       Impact factor: 3.641

8.  (E)-1-(Pyridin-2-yl)-3-(3,4,5-trimeth-oxy-phen-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Thitipone Suwunwong; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-27

9.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  9 in total
  2 in total

1.  (E)-1-(Thio-phen-2-yl)-3-(2,4,6-tri-meth-oxy-phen-yl)prop-2-en-1-one.

Authors:  Hoong-Kun Fun; Thitipone Suwunwong; Teerasak Anantapong; Chatchanok Karalai; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-10-29

2.  (E)-1-(Furan-2-yl)-3-(2,4,5-trimeth-oxy-phen-yl)prop-2-en-1-one.

Authors:  Thitipone Suwunwong; Suchada Chantrapromma; Chatchanok Karalai; Pitikan Wisitsak; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-11
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.