Literature DB >> 24046643

(2E)-1-(Pyridin-2-yl)-3-(2,4,5-tri-meth-oxy-phen-yl)prop-2-en-1-one.

Suchada Chantrapromma1, Thitipone Suwunwong, Nawong Boonnak, Hoong-Kun Fun.   

Abstract

The title heteroaryl chalcone derivative, C17H17NO4, is close to planar: the dihedral angle between the pyridine and benzene rings is 3.71 (11)° and the meth-oxy C atoms deviate from their attached ring by 0.046 (3), -0.044 (2) and 0.127 (3) Å. The disposition of the pyridine N atom and the carbonyl group is anti [N-C-C-O = -177.7 (2)°]. In the crystal, mol-ecules are linked by weak C-H⋯N and C-H⋯O inter-actions into (100) sheets and an aromatic π-π stacking inter-action between the pyridine and benzene ring, with a centroid-centroid separation of 3.7036 (14) Å also occurs.

Entities:  

Year:  2013        PMID: 24046643      PMCID: PMC3770358          DOI: 10.1107/S1600536813015821

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the fluorescence properties of heteroaryl chalcones, see: Suwunwong et al. (2011 ▶). For related structures, see: Chantrapromma et al. (2009 ▶); Fun et al. (2010 ▶, 2011 ▶); Suwunwong et al. (2012 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C17H17NO4 M = 299.32 Monoclinic, a = 8.4047 (3) Å b = 8.7285 (3) Å c = 19.5086 (7) Å β = 94.113 (2)° V = 1427.47 (9) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.32 × 0.27 × 0.16 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.969, T max = 0.984 14970 measured reflections 3792 independent reflections 2435 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.067 wR(F 2) = 0.188 S = 1.07 3792 reflections 202 parameters H-atom parameters constrained Δρmax = 0.58 e Å−3 Δρmin = −0.29 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL ; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL, PLATON (Spek, 2009 ▶), Mercury (Macrae et al., 2006 ▶) and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813015821/hb7090sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813015821/hb7090Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813015821/hb7090Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H17NO4F(000) = 632
Mr = 299.32Dx = 1.393 Mg m3
Monoclinic, P21/cMelting point = 428–429 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 8.4047 (3) ÅCell parameters from 3792 reflections
b = 8.7285 (3) Åθ = 2.1–29.0°
c = 19.5086 (7) ŵ = 0.10 mm1
β = 94.113 (2)°T = 100 K
V = 1427.47 (9) Å3Block, yellow
Z = 40.32 × 0.27 × 0.16 mm
Bruker APEXII CCD diffractometer3792 independent reflections
Radiation source: sealed tube2435 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.054
φ and ω scansθmax = 29.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −10→11
Tmin = 0.969, Tmax = 0.984k = −11→11
14970 measured reflectionsl = −26→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.067Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.188H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0802P)2 + 1.2643P] where P = (Fo2 + 2Fc2)/3
3792 reflections(Δ/σ)max = 0.001
202 parametersΔρmax = 0.58 e Å3
0 restraintsΔρmin = −0.29 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.6126 (2)0.93348 (19)−0.05940 (8)0.0229 (4)
O20.9130 (2)0.60091 (19)0.09428 (8)0.0234 (4)
O31.3110 (2)0.78070 (19)0.26882 (8)0.0219 (4)
O41.2622 (2)1.05914 (19)0.22949 (8)0.0234 (4)
N10.7107 (2)1.3210 (2)−0.02122 (10)0.0194 (4)
C10.6314 (3)1.2048 (3)−0.05320 (11)0.0166 (5)
C20.5113 (3)1.2269 (3)−0.10560 (12)0.0221 (5)
H2A0.45971.1436−0.12700.027*
C30.4706 (3)1.3755 (3)−0.12499 (12)0.0239 (5)
H3A0.39011.3938−0.15920.029*
C40.5517 (3)1.4957 (3)−0.09262 (12)0.0234 (5)
H4A0.52761.5964−0.10500.028*
C50.6702 (3)1.4634 (3)−0.04114 (12)0.0222 (5)
H5A0.72411.5450−0.01940.027*
C60.6774 (3)1.0442 (3)−0.03057 (11)0.0184 (5)
C70.7993 (3)1.0306 (3)0.02671 (11)0.0214 (5)
H7A0.84591.11880.04590.026*
C80.8451 (3)0.8932 (3)0.05195 (11)0.0199 (5)
H8A0.79490.80800.03150.024*
C90.9661 (3)0.8631 (3)0.10836 (11)0.0178 (5)
C100.9984 (3)0.7123 (3)0.12964 (11)0.0172 (5)
C111.1109 (3)0.6809 (3)0.18425 (11)0.0165 (5)
H11A1.12810.58050.19890.020*
C121.1961 (3)0.7987 (3)0.21634 (11)0.0173 (5)
C131.1689 (3)0.9518 (3)0.19514 (11)0.0176 (5)
C141.0550 (3)0.9814 (3)0.14248 (11)0.0177 (5)
H14A1.03611.08240.12900.021*
C150.9402 (3)0.4457 (3)0.11480 (13)0.0268 (6)
H15A0.87530.37910.08530.040*
H15B0.91300.43270.16140.040*
H15C1.05070.42070.11150.040*
C161.3405 (3)0.6280 (3)0.29434 (12)0.0230 (5)
H16A1.41700.63150.33330.035*
H16B1.38140.56620.25890.035*
H16C1.24270.58440.30790.035*
C171.2442 (3)1.2141 (3)0.20699 (13)0.0248 (5)
H17A1.32231.27700.23190.037*
H17B1.13921.24970.21530.037*
H17C1.25901.21990.15870.037*
U11U22U33U12U13U23
O10.0286 (9)0.0155 (9)0.0246 (8)−0.0034 (7)0.0011 (7)−0.0018 (7)
O20.0307 (10)0.0092 (8)0.0283 (8)−0.0006 (7)−0.0102 (7)0.0001 (7)
O30.0235 (9)0.0135 (8)0.0271 (8)0.0002 (7)−0.0089 (7)0.0034 (7)
O40.0269 (9)0.0110 (9)0.0307 (9)−0.0018 (7)−0.0094 (7)0.0017 (7)
N10.0240 (10)0.0142 (10)0.0199 (9)0.0012 (8)0.0006 (8)0.0004 (8)
C10.0188 (11)0.0145 (11)0.0168 (10)0.0014 (9)0.0030 (8)0.0013 (9)
C20.0211 (12)0.0231 (13)0.0217 (11)−0.0010 (10)−0.0015 (9)0.0009 (10)
C30.0214 (12)0.0285 (14)0.0216 (11)0.0053 (11)−0.0002 (9)0.0035 (10)
C40.0250 (13)0.0195 (13)0.0263 (12)0.0072 (10)0.0063 (10)0.0062 (10)
C50.0268 (13)0.0155 (12)0.0242 (11)0.0022 (10)0.0021 (9)−0.0002 (9)
C60.0224 (12)0.0167 (12)0.0163 (10)−0.0011 (10)0.0033 (8)−0.0007 (9)
C70.0249 (12)0.0162 (12)0.0225 (11)−0.0009 (10)−0.0031 (9)−0.0013 (9)
C80.0206 (11)0.0176 (12)0.0214 (10)−0.0014 (10)−0.0007 (9)−0.0009 (9)
C90.0210 (12)0.0139 (11)0.0183 (10)0.0005 (9)−0.0003 (9)0.0011 (9)
C100.0189 (11)0.0125 (11)0.0202 (10)−0.0009 (9)0.0020 (9)0.0005 (9)
C110.0167 (11)0.0112 (11)0.0216 (10)0.0006 (9)0.0008 (8)0.0029 (9)
C120.0158 (11)0.0172 (12)0.0186 (10)0.0023 (9)−0.0014 (8)0.0024 (9)
C130.0200 (11)0.0110 (11)0.0217 (10)−0.0016 (9)0.0009 (9)0.0002 (9)
C140.0229 (12)0.0108 (11)0.0196 (10)0.0013 (9)0.0030 (9)0.0018 (9)
C150.0369 (14)0.0125 (12)0.0295 (12)−0.0012 (11)−0.0089 (11)0.0023 (10)
C160.0241 (12)0.0163 (12)0.0276 (12)0.0004 (10)−0.0049 (10)0.0060 (10)
C170.0277 (13)0.0115 (11)0.0342 (13)−0.0015 (10)−0.0051 (10)0.0025 (10)
O1—C61.226 (3)C7—H7A0.9300
O2—C101.366 (3)C8—C91.468 (3)
O2—C151.427 (3)C8—H8A0.9300
O3—C121.365 (3)C9—C101.400 (3)
O3—C161.438 (3)C9—C141.413 (3)
O4—C131.366 (3)C10—C111.400 (3)
O4—C171.427 (3)C11—C121.378 (3)
N1—C51.339 (3)C11—H11A0.9300
N1—C11.343 (3)C12—C131.412 (3)
C1—C21.397 (3)C13—C141.377 (3)
C1—C61.511 (3)C14—H14A0.9300
C2—C31.388 (4)C15—H15A0.9600
C2—H2A0.9300C15—H15B0.9600
C3—C41.379 (4)C15—H15C0.9600
C3—H3A0.9300C16—H16A0.9600
C4—C51.392 (3)C16—H16B0.9600
C4—H4A0.9300C16—H16C0.9600
C5—H5A0.9300C17—H17A0.9600
C6—C71.466 (3)C17—H17B0.9600
C7—C81.343 (3)C17—H17C0.9600
C10—O2—C15117.81 (18)O2—C10—C9115.8 (2)
C12—O3—C16117.48 (18)C11—C10—C9121.0 (2)
C13—O4—C17117.05 (18)C12—C11—C10120.0 (2)
C5—N1—C1117.3 (2)C12—C11—H11A120.0
N1—C1—C2123.0 (2)C10—C11—H11A120.0
N1—C1—C6117.17 (19)O3—C12—C11124.8 (2)
C2—C1—C6119.9 (2)O3—C12—C13114.8 (2)
C3—C2—C1118.6 (2)C11—C12—C13120.3 (2)
C3—C2—H2A120.7O4—C13—C14125.5 (2)
C1—C2—H2A120.7O4—C13—C12115.46 (19)
C4—C3—C2118.9 (2)C14—C13—C12119.0 (2)
C4—C3—H3A120.6C13—C14—C9122.0 (2)
C2—C3—H3A120.6C13—C14—H14A119.0
C3—C4—C5118.7 (2)C9—C14—H14A119.0
C3—C4—H4A120.6O2—C15—H15A109.5
C5—C4—H4A120.6O2—C15—H15B109.5
N1—C5—C4123.5 (2)H15A—C15—H15B109.5
N1—C5—H5A118.3O2—C15—H15C109.5
C4—C5—H5A118.3H15A—C15—H15C109.5
O1—C6—C7123.3 (2)H15B—C15—H15C109.5
O1—C6—C1120.1 (2)O3—C16—H16A109.5
C7—C6—C1116.6 (2)O3—C16—H16B109.5
C8—C7—C6121.2 (2)H16A—C16—H16B109.5
C8—C7—H7A119.4O3—C16—H16C109.5
C6—C7—H7A119.4H16A—C16—H16C109.5
C7—C8—C9126.9 (2)H16B—C16—H16C109.5
C7—C8—H8A116.6O4—C17—H17A109.5
C9—C8—H8A116.6O4—C17—H17B109.5
C10—C9—C14117.6 (2)H17A—C17—H17B109.5
C10—C9—C8120.0 (2)O4—C17—H17C109.5
C14—C9—C8122.5 (2)H17A—C17—H17C109.5
O2—C10—C11123.1 (2)H17B—C17—H17C109.5
C5—N1—C1—C20.3 (3)C8—C9—C10—O20.9 (3)
C5—N1—C1—C6−180.0 (2)C14—C9—C10—C112.1 (3)
N1—C1—C2—C3−0.8 (3)C8—C9—C10—C11−178.7 (2)
C6—C1—C2—C3179.5 (2)O2—C10—C11—C12178.1 (2)
C1—C2—C3—C41.0 (3)C9—C10—C11—C12−2.4 (3)
C2—C3—C4—C5−0.7 (3)C16—O3—C12—C11−2.8 (3)
C1—N1—C5—C40.0 (3)C16—O3—C12—C13177.9 (2)
C3—C4—C5—N10.2 (4)C10—C11—C12—O3−178.3 (2)
N1—C1—C6—O1−177.7 (2)C10—C11—C12—C131.0 (3)
C2—C1—C6—O12.0 (3)C17—O4—C13—C14−2.6 (3)
N1—C1—C6—C72.9 (3)C17—O4—C13—C12176.7 (2)
C2—C1—C6—C7−177.4 (2)O3—C12—C13—O40.7 (3)
O1—C6—C7—C8−1.3 (4)C11—C12—C13—O4−178.7 (2)
C1—C6—C7—C8178.0 (2)O3—C12—C13—C14−180.0 (2)
C6—C7—C8—C9179.4 (2)C11—C12—C13—C140.6 (3)
C7—C8—C9—C10178.8 (2)O4—C13—C14—C9178.4 (2)
C7—C8—C9—C14−2.0 (4)C12—C13—C14—C9−0.9 (3)
C15—O2—C10—C110.4 (3)C10—C9—C14—C13−0.4 (3)
C15—O2—C10—C9−179.1 (2)C8—C9—C14—C13−179.7 (2)
C14—C9—C10—O2−178.38 (19)
D—H···AD—HH···AD···AD—H···A
C3—H3A···O4i0.932.393.277 (3)160
C15—H15A···N1ii0.962.473.349 (3)153
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C3—H3A⋯O4i 0.932.393.277 (3)160
C15—H15A⋯N1ii 0.962.473.349 (3)153

Symmetry codes: (i) ; (ii) .

  6 in total

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (E)-1-(2-Fur-yl)-3-(2,4,6-trimeth-oxy-phen-yl)prop-2-en-1-one.

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Authors:  Hoong-Kun Fun; Thitipone Suwunwong; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-08-27

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Authors:  Thitipone Suwunwong; Suchada Chantrapromma; Chatchanok Karalai; Pitikan Wisitsak; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-11

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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