Literature DB >> 22058809

4a-Hydroxy-9-(4-hydroxyphenyl)-4,4a,5,6,9,9a-hexahydro-3H-xanthene-1,8(2H,7H)-dione.

Liying Wang1, Weicheng Lu, Yan Yang, Yulin Zhu.   

Abstract

The title compound, C(19)H(20)O(5), was synthesized by the reaction of 1,3-cyclo-hexa-nedione and 4-hy-droxy-benzaldehyde in the presence of PdCl(2) and thio-urea. The tetra-hydro-pyran ring and the six-membered cyclo-hexene ring adopt envelope conformations, and the six-membered cyclo-hexane ring is in a chair conformation. The crystal packing is stabilized by classical inter-molecular O-H⋯O hydrogen bonds and weak C-H⋯O inter-actions.

Entities:  

Year:  2011        PMID: 22058809      PMCID: PMC3201323          DOI: 10.1107/S1600536811038335

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of related compounds, see: Menchen et al. (2003 ▶); Saint-Ruf et al. (1972 ▶); Reddy et al. (2009 ▶); Mehdi et al. (2011 ▶). For the synthesis of related compounds, see: Karade et al. (2007 ▶); Luna et al. (2009 ▶). For related structures, see: Loh et al. (2011 ▶); Yang et al. (2011 ▶).

Experimental

Crystal data

C19H20O5 M = 328.35 Monoclinic, a = 9.014 (4) Å b = 10.242 (4) Å c = 9.289 (4) Å β = 108.194 (4)° V = 814.7 (6) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 295 K 0.35 × 0.30 × 0.20 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.967, T max = 0.981 4840 measured reflections 1876 independent reflections 1652 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.113 S = 1.04 1863 reflections 219 parameters 14 restraints H-atom parameters constrained Δρmax = 0.41 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536811038335/rk2296sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811038335/rk2296Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811038335/rk2296Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H20O5F(000) = 348.0
Mr = 328.35Dx = 1.339 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 1885 reflections
a = 9.014 (4) Åθ = 2.4–26.8°
b = 10.242 (4) ŵ = 0.10 mm1
c = 9.289 (4) ÅT = 295 K
β = 108.194 (4)°Block, colourless
V = 814.7 (6) Å30.35 × 0.30 × 0.20 mm
Z = 2
Bruker APEXII CCD diffractometer1876 independent reflections
Radiation source: fine-focus sealed tube1652 reflections with I > 2σ(I)
graphiteRint = 0.027
φ– and ω–scansθmax = 27.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −11→11
Tmin = 0.967, Tmax = 0.981k = −13→12
4840 measured reflectionsl = −10→11
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.113H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0658P)2 + 0.1291P] where P = (Fo2 + 2Fc2)/3
1863 reflections(Δ/σ)max = 0.001
219 parametersΔρmax = 0.41 e Å3
14 restraintsΔρmin = −0.19 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
C90.1903 (3)0.1561 (2)0.8768 (3)0.0289 (5)
H90.19540.06120.89120.035*
C9A0.3440 (3)0.2024 (3)0.8614 (3)0.0307 (5)
C4A0.4337 (3)0.2922 (3)0.9542 (3)0.0354 (6)
C8A0.1606 (3)0.2192 (3)1.0149 (3)0.0307 (6)
H130.10370.30030.97820.037*
C50.2735 (3)0.3317 (3)1.2653 (3)0.0407 (7)
H5A0.21740.41161.22640.049*
H5B0.37070.35511.34170.049*
C80.0566 (3)0.1394 (3)1.0823 (3)0.0432 (7)
C60.1760 (4)0.2471 (4)1.3358 (4)0.0483 (8)
H6A0.15040.29621.41420.058*
H6B0.23620.17121.38260.058*
C10.4046 (3)0.1347 (3)0.7535 (3)0.0375 (6)
C4B0.3076 (3)0.2586 (3)1.1383 (3)0.0338 (6)
C40.5792 (4)0.3490 (4)0.9360 (4)0.0492 (8)
H4A0.66940.31181.01140.059*
H4B0.58030.44260.95250.059*
C70.0251 (4)0.2026 (4)1.2164 (4)0.0540 (9)
H7A−0.02870.14091.26190.065*
H7B−0.04280.27741.18200.065*
C20.5553 (4)0.1824 (4)0.7353 (5)0.0656 (11)
H2A0.64030.12900.79710.079*
H2B0.55130.17150.63040.079*
C30.5892 (6)0.3217 (5)0.7787 (6)0.0818 (15)
H3A0.51510.37680.70580.098*
H3B0.69300.34330.77600.098*
O10.4005 (2)0.34289 (19)1.0760 (2)0.0357 (4)
O20.3391 (3)0.0380 (2)0.6848 (3)0.0487 (6)
O40.3938 (2)0.1433 (2)1.1914 (2)0.0435 (5)
H40.47950.16241.25060.065*
O5−0.3220 (3)0.2708 (3)0.3538 (3)0.0548 (6)
H5−0.33260.34970.33980.082*
O30.0004 (4)0.0370 (3)1.0282 (3)0.0698 (8)
C13−0.1962 (3)0.2473 (3)0.4795 (3)0.0340 (6)
C110.0184 (3)0.3158 (3)0.6905 (3)0.0350 (6)
H190.07820.38300.74720.042*
C100.0564 (3)0.1873 (3)0.7339 (3)0.0275 (5)
C14−0.1588 (3)0.1177 (3)0.5195 (3)0.0376 (6)
H16−0.21790.05070.46160.045*
C15−0.0334 (3)0.0891 (3)0.6455 (3)0.0323 (6)
H15−0.00860.00240.67170.039*
C12−0.1073 (3)0.3459 (3)0.5641 (3)0.0365 (6)
H18−0.13120.43250.53670.044*
U11U22U33U12U13U23
C90.0264 (11)0.0269 (13)0.0275 (13)−0.0013 (10)0.0000 (10)0.0017 (10)
C9A0.0270 (11)0.0307 (13)0.0306 (13)0.0014 (10)0.0034 (10)0.0007 (11)
C4A0.0330 (12)0.0342 (14)0.0358 (14)−0.0032 (11)0.0062 (11)−0.0044 (12)
C8A0.0306 (12)0.0304 (14)0.0278 (13)−0.0016 (10)0.0045 (10)0.0013 (11)
C50.0407 (14)0.0428 (17)0.0348 (14)0.0025 (13)0.0064 (11)−0.0078 (13)
C80.0421 (14)0.0477 (17)0.0379 (15)−0.0097 (14)0.0099 (12)0.0021 (14)
C60.0621 (19)0.0514 (19)0.0340 (15)0.0075 (16)0.0186 (14)0.0012 (14)
C10.0362 (13)0.0389 (15)0.0330 (14)0.0042 (12)0.0044 (11)−0.0019 (12)
C4B0.0330 (13)0.0341 (14)0.0301 (14)−0.0014 (11)0.0038 (11)−0.0037 (11)
C40.0409 (15)0.0504 (18)0.0570 (19)−0.0156 (14)0.0165 (14)−0.0104 (16)
C70.0548 (19)0.061 (2)0.053 (2)−0.0116 (17)0.0268 (16)−0.0054 (18)
C20.0526 (19)0.079 (3)0.075 (3)−0.0129 (19)0.0353 (19)−0.029 (2)
C30.089 (3)0.077 (3)0.105 (3)−0.036 (3)0.066 (3)−0.027 (3)
O10.0346 (9)0.0329 (10)0.0368 (10)−0.0065 (8)0.0074 (8)−0.0081 (8)
O20.0484 (12)0.0473 (13)0.0444 (13)0.0007 (10)0.0059 (10)−0.0167 (10)
O40.0444 (11)0.0390 (11)0.0378 (11)0.0083 (9)−0.0005 (8)0.0008 (9)
O50.0443 (11)0.0498 (14)0.0473 (13)0.0012 (10)−0.0190 (9)0.0032 (11)
O30.0865 (18)0.0670 (18)0.0645 (18)−0.0429 (15)0.0359 (15)−0.0146 (14)
C130.0264 (12)0.0407 (15)0.0285 (13)0.0015 (11)−0.0008 (10)0.0030 (11)
C110.0354 (13)0.0309 (14)0.0306 (13)−0.0029 (11)−0.0014 (10)0.0005 (11)
C100.0235 (11)0.0307 (13)0.0250 (12)−0.0002 (10)0.0031 (9)0.0025 (10)
C140.0300 (12)0.0396 (16)0.0351 (14)−0.0079 (11)−0.0017 (11)−0.0065 (12)
C150.0319 (12)0.0268 (13)0.0345 (14)−0.0013 (10)0.0050 (11)0.0004 (11)
C120.0384 (13)0.0300 (14)0.0344 (14)0.0038 (11)0.0017 (11)0.0051 (11)
C9—C9A1.513 (3)C4—C31.518 (6)
C9—C101.523 (3)C4—H4A0.9700
C9—C8A1.533 (4)C4—H4B0.9700
C9—H90.9800C7—H7A0.9700
C9A—C4A1.345 (4)C7—H7B0.9700
C9A—C11.458 (4)C2—C31.487 (6)
C4A—O11.360 (3)C2—H2A0.9700
C4A—C41.492 (4)C2—H2B0.9700
C8A—C4B1.512 (3)C3—H3A0.9700
C8A—C81.518 (4)C3—H3B0.9700
C8A—H130.9800O4—H40.8200
C5—C4B1.508 (4)O5—C131.371 (3)
C5—C61.521 (5)O5—H50.8200
C5—H5A0.9700C13—C121.373 (4)
C5—H5B0.9700C13—C141.391 (4)
C8—O31.204 (4)C11—C121.388 (4)
C8—C71.507 (5)C11—C101.388 (4)
C6—C71.532 (5)C11—H190.9300
C6—H6A0.9700C10—C151.387 (4)
C6—H6B0.9700C14—C151.381 (4)
C1—O21.225 (4)C14—H160.9300
C1—C21.502 (5)C15—H150.9300
C4B—O41.416 (4)C12—H180.9300
C4B—O11.443 (3)
C9A—C9—C10110.6 (2)C3—C4—H4A109.5
C9A—C9—C8A110.6 (2)C4A—C4—H4B109.5
C10—C9—C8A110.0 (2)C3—C4—H4B109.5
C9A—C9—H9108.5H4A—C4—H4B108.1
C10—C9—H9108.5C8—C7—C6111.9 (3)
C8A—C9—H9108.5C8—C7—H7A109.2
C4A—C9A—C1119.1 (2)C6—C7—H7A109.2
C4A—C9A—C9122.6 (2)C8—C7—H7B109.2
C1—C9A—C9117.8 (2)C6—C7—H7B109.2
C9A—C4A—O1123.3 (2)H7A—C7—H7B107.9
C9A—C4A—C4124.6 (3)C3—C2—C1113.4 (3)
O1—C4A—C4112.0 (2)C3—C2—H2A108.9
C4B—C8A—C8109.8 (2)C1—C2—H2A108.9
C4B—C8A—C9114.0 (2)C3—C2—H2B108.9
C8—C8A—C9114.2 (2)C1—C2—H2B108.9
C4B—C8A—H13106.0H2A—C2—H2B107.7
C8—C8A—H13106.0C2—C3—C4111.7 (4)
C9—C8A—H13106.0C2—C3—H3A109.3
C4B—C5—C6109.9 (3)C4—C3—H3A109.3
C4B—C5—H5A109.7C2—C3—H3B109.3
C6—C5—H5A109.7C4—C3—H3B109.3
C4B—C5—H5B109.7H3A—C3—H3B107.9
C6—C5—H5B109.7C4A—O1—C4B114.3 (2)
H5A—C5—H5B108.2C4B—O4—H4109.5
O3—C8—C7123.7 (3)C13—O5—H5109.5
O3—C8—C8A122.0 (3)O5—C13—C12122.5 (3)
C7—C8—C8A114.2 (3)O5—C13—C14117.5 (2)
C5—C6—C7111.1 (3)C12—C13—C14120.0 (2)
C5—C6—H6A109.4C12—C11—C10121.2 (3)
C7—C6—H6A109.4C12—C11—H19119.4
C5—C6—H6B109.4C10—C11—H19119.4
C7—C6—H6B109.4C15—C10—C11118.0 (2)
H6A—C6—H6B108.0C15—C10—C9121.4 (2)
O2—C1—C9A121.3 (3)C11—C10—C9120.6 (2)
O2—C1—C2120.7 (3)C15—C14—C13119.6 (3)
C9A—C1—C2117.9 (3)C15—C14—H16120.2
O4—C4B—O1108.4 (2)C13—C14—H16120.2
O4—C4B—C5111.4 (2)C14—C15—C10121.3 (3)
O1—C4B—C5107.6 (2)C14—C15—H15119.3
O4—C4B—C8A107.3 (2)C10—C15—H15119.3
O1—C4B—C8A109.7 (2)C13—C12—C11119.8 (3)
C5—C4B—C8A112.4 (2)C13—C12—H18120.1
C4A—C4—C3110.8 (3)C11—C12—H18120.1
C4A—C4—H4A109.5
C10—C9—C9A—C4A118.8 (3)C9—C8A—C4B—C5174.6 (2)
C8A—C9—C9A—C4A−3.4 (3)C9A—C4A—C4—C315.5 (5)
C10—C9—C9A—C1−68.9 (3)O1—C4A—C4—C3−163.9 (3)
C8A—C9—C9A—C1169.0 (2)O3—C8—C7—C6132.1 (4)
C1—C9A—C4A—O1−167.6 (3)C8A—C8—C7—C6−50.7 (4)
C9—C9A—C4A—O14.7 (4)C5—C6—C7—C852.4 (4)
C1—C9A—C4A—C413.1 (4)O2—C1—C2—C3159.2 (4)
C9—C9A—C4A—C4−174.7 (3)C9A—C1—C2—C3−24.1 (5)
C9A—C9—C8A—C4B−26.3 (3)C1—C2—C3—C452.2 (6)
C10—C9—C8A—C4B−148.8 (2)C4A—C4—C3—C2−47.4 (5)
C9A—C9—C8A—C8−153.6 (2)C9A—C4A—O1—C4B25.7 (4)
C10—C9—C8A—C883.9 (3)C4—C4A—O1—C4B−154.9 (2)
C4B—C8A—C8—O3−131.1 (3)O4—C4B—O1—C4A62.6 (3)
C9—C8A—C8—O3−1.7 (4)C5—C4B—O1—C4A−176.7 (2)
C4B—C8A—C8—C751.6 (3)C8A—C4B—O1—C4A−54.2 (3)
C9—C8A—C8—C7−179.0 (3)C12—C11—C10—C151.1 (4)
C4B—C5—C6—C7−56.4 (4)C12—C11—C10—C9−177.3 (2)
C4A—C9A—C1—O2167.8 (3)C9A—C9—C10—C15117.6 (3)
C9—C9A—C1—O2−4.8 (4)C8A—C9—C10—C15−120.0 (2)
C4A—C9A—C1—C2−8.8 (4)C9A—C9—C10—C11−64.0 (3)
C9—C9A—C1—C2178.6 (3)C8A—C9—C10—C1158.4 (3)
C6—C5—C4B—O4−61.1 (3)O5—C13—C14—C15−179.8 (3)
C6—C5—C4B—O1−179.8 (2)C12—C13—C14—C150.9 (4)
C6—C5—C4B—C8A59.3 (3)C13—C14—C15—C100.2 (4)
C8—C8A—C4B—O467.0 (3)C11—C10—C15—C14−1.1 (4)
C9—C8A—C4B—O4−62.6 (3)C9—C10—C15—C14177.3 (2)
C8—C8A—C4B—O1−175.5 (2)O5—C13—C12—C11179.8 (3)
C9—C8A—C4B—O154.9 (3)C14—C13—C12—C11−0.9 (4)
C8—C8A—C4B—C5−55.9 (3)C10—C11—C12—C13−0.1 (4)
D—H···AD—HH···AD···AD—H···A
O4—H4···O5i0.822.072.852 (3)160.
O5—H5···O2ii0.821.942.758 (4)175.
C4—H4B···O4iii0.972.503.274 (5)137.
C8A—H13···O3iv0.982.593.535 (4)161.
C12—H18···O2ii0.932.553.251 (4)132.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O4—H4⋯O5i0.822.072.852 (3)160
O5—H5⋯O2ii0.821.942.758 (4)175
C4—H4B⋯O4iii0.972.503.274 (5)137
C8A—H13⋯O3iv0.982.593.535 (4)161
C12—H18⋯O2ii0.932.553.251 (4)132

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-04

4.  9-(3,4-Dimeth-oxy-phen-yl)-3,3,6,6-tetra-methyl-4,5,6,9-tetra-hydro-3H-xanthene-1,8(2H,7H)-dione.

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-06-18

5.  9-(4-Chloro-phen-yl)-4a-hy-droxy-4,4a,5,6,9,9a-hexa-hydro-3H-xanthene-1,8(2H,7H)-dione.

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