| Literature DB >> 22058809 |
Liying Wang1, Weicheng Lu, Yan Yang, Yulin Zhu.
Abstract
The title compound, C(19)H(20)O(5), was synthesized by the reaction of 1,3-cyclo-hexa-nedione and 4-hy-droxy-benzaldehyde in the presence of PdCl(2) and thio-urea. The tetra-hydro-pyran ring and the six-membered cyclo-hexene ring adopt envelope conformations, and the six-membered cyclo-hexane ring is in a chair conformation. The crystal packing is stabilized by classical inter-molecular O-H⋯O hydrogen bonds and weak C-H⋯O inter-actions.Entities:
Year: 2011 PMID: 22058809 PMCID: PMC3201323 DOI: 10.1107/S1600536811038335
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H20O5 | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 1885 reflections |
| θ = 2.4–26.8° | |
| µ = 0.10 mm−1 | |
| β = 108.194 (4)° | Block, colourless |
| 0.35 × 0.30 × 0.20 mm | |
| Bruker APEXII CCD diffractometer | 1876 independent reflections |
| Radiation source: fine-focus sealed tube | 1652 reflections with |
| graphite | |
| φ– and ω–scans | θmax = 27.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 4840 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1863 reflections | (Δ/σ)max = 0.001 |
| 219 parameters | Δρmax = 0.41 e Å−3 |
| 14 restraints | Δρmin = −0.19 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| C9 | 0.1903 (3) | 0.1561 (2) | 0.8768 (3) | 0.0289 (5) | |
| H9 | 0.1954 | 0.0612 | 0.8912 | 0.035* | |
| C9A | 0.3440 (3) | 0.2024 (3) | 0.8614 (3) | 0.0307 (5) | |
| C4A | 0.4337 (3) | 0.2922 (3) | 0.9542 (3) | 0.0354 (6) | |
| C8A | 0.1606 (3) | 0.2192 (3) | 1.0149 (3) | 0.0307 (6) | |
| H13 | 0.1037 | 0.3003 | 0.9782 | 0.037* | |
| C5 | 0.2735 (3) | 0.3317 (3) | 1.2653 (3) | 0.0407 (7) | |
| H5A | 0.2174 | 0.4116 | 1.2264 | 0.049* | |
| H5B | 0.3707 | 0.3551 | 1.3417 | 0.049* | |
| C8 | 0.0566 (3) | 0.1394 (3) | 1.0823 (3) | 0.0432 (7) | |
| C6 | 0.1760 (4) | 0.2471 (4) | 1.3358 (4) | 0.0483 (8) | |
| H6A | 0.1504 | 0.2962 | 1.4142 | 0.058* | |
| H6B | 0.2362 | 0.1712 | 1.3826 | 0.058* | |
| C1 | 0.4046 (3) | 0.1347 (3) | 0.7535 (3) | 0.0375 (6) | |
| C4B | 0.3076 (3) | 0.2586 (3) | 1.1383 (3) | 0.0338 (6) | |
| C4 | 0.5792 (4) | 0.3490 (4) | 0.9360 (4) | 0.0492 (8) | |
| H4A | 0.6694 | 0.3118 | 1.0114 | 0.059* | |
| H4B | 0.5803 | 0.4426 | 0.9525 | 0.059* | |
| C7 | 0.0251 (4) | 0.2026 (4) | 1.2164 (4) | 0.0540 (9) | |
| H7A | −0.0287 | 0.1409 | 1.2619 | 0.065* | |
| H7B | −0.0428 | 0.2774 | 1.1820 | 0.065* | |
| C2 | 0.5553 (4) | 0.1824 (4) | 0.7353 (5) | 0.0656 (11) | |
| H2A | 0.6403 | 0.1290 | 0.7971 | 0.079* | |
| H2B | 0.5513 | 0.1715 | 0.6304 | 0.079* | |
| C3 | 0.5892 (6) | 0.3217 (5) | 0.7787 (6) | 0.0818 (15) | |
| H3A | 0.5151 | 0.3768 | 0.7058 | 0.098* | |
| H3B | 0.6930 | 0.3433 | 0.7760 | 0.098* | |
| O1 | 0.4005 (2) | 0.34289 (19) | 1.0760 (2) | 0.0357 (4) | |
| O2 | 0.3391 (3) | 0.0380 (2) | 0.6848 (3) | 0.0487 (6) | |
| O4 | 0.3938 (2) | 0.1433 (2) | 1.1914 (2) | 0.0435 (5) | |
| H4 | 0.4795 | 0.1624 | 1.2506 | 0.065* | |
| O5 | −0.3220 (3) | 0.2708 (3) | 0.3538 (3) | 0.0548 (6) | |
| H5 | −0.3326 | 0.3497 | 0.3398 | 0.082* | |
| O3 | 0.0004 (4) | 0.0370 (3) | 1.0282 (3) | 0.0698 (8) | |
| C13 | −0.1962 (3) | 0.2473 (3) | 0.4795 (3) | 0.0340 (6) | |
| C11 | 0.0184 (3) | 0.3158 (3) | 0.6905 (3) | 0.0350 (6) | |
| H19 | 0.0782 | 0.3830 | 0.7472 | 0.042* | |
| C10 | 0.0564 (3) | 0.1873 (3) | 0.7339 (3) | 0.0275 (5) | |
| C14 | −0.1588 (3) | 0.1177 (3) | 0.5195 (3) | 0.0376 (6) | |
| H16 | −0.2179 | 0.0507 | 0.4616 | 0.045* | |
| C15 | −0.0334 (3) | 0.0891 (3) | 0.6455 (3) | 0.0323 (6) | |
| H15 | −0.0086 | 0.0024 | 0.6717 | 0.039* | |
| C12 | −0.1073 (3) | 0.3459 (3) | 0.5641 (3) | 0.0365 (6) | |
| H18 | −0.1312 | 0.4325 | 0.5367 | 0.044* |
| C9 | 0.0264 (11) | 0.0269 (13) | 0.0275 (13) | −0.0013 (10) | 0.0000 (10) | 0.0017 (10) |
| C9A | 0.0270 (11) | 0.0307 (13) | 0.0306 (13) | 0.0014 (10) | 0.0034 (10) | 0.0007 (11) |
| C4A | 0.0330 (12) | 0.0342 (14) | 0.0358 (14) | −0.0032 (11) | 0.0062 (11) | −0.0044 (12) |
| C8A | 0.0306 (12) | 0.0304 (14) | 0.0278 (13) | −0.0016 (10) | 0.0045 (10) | 0.0013 (11) |
| C5 | 0.0407 (14) | 0.0428 (17) | 0.0348 (14) | 0.0025 (13) | 0.0064 (11) | −0.0078 (13) |
| C8 | 0.0421 (14) | 0.0477 (17) | 0.0379 (15) | −0.0097 (14) | 0.0099 (12) | 0.0021 (14) |
| C6 | 0.0621 (19) | 0.0514 (19) | 0.0340 (15) | 0.0075 (16) | 0.0186 (14) | 0.0012 (14) |
| C1 | 0.0362 (13) | 0.0389 (15) | 0.0330 (14) | 0.0042 (12) | 0.0044 (11) | −0.0019 (12) |
| C4B | 0.0330 (13) | 0.0341 (14) | 0.0301 (14) | −0.0014 (11) | 0.0038 (11) | −0.0037 (11) |
| C4 | 0.0409 (15) | 0.0504 (18) | 0.0570 (19) | −0.0156 (14) | 0.0165 (14) | −0.0104 (16) |
| C7 | 0.0548 (19) | 0.061 (2) | 0.053 (2) | −0.0116 (17) | 0.0268 (16) | −0.0054 (18) |
| C2 | 0.0526 (19) | 0.079 (3) | 0.075 (3) | −0.0129 (19) | 0.0353 (19) | −0.029 (2) |
| C3 | 0.089 (3) | 0.077 (3) | 0.105 (3) | −0.036 (3) | 0.066 (3) | −0.027 (3) |
| O1 | 0.0346 (9) | 0.0329 (10) | 0.0368 (10) | −0.0065 (8) | 0.0074 (8) | −0.0081 (8) |
| O2 | 0.0484 (12) | 0.0473 (13) | 0.0444 (13) | 0.0007 (10) | 0.0059 (10) | −0.0167 (10) |
| O4 | 0.0444 (11) | 0.0390 (11) | 0.0378 (11) | 0.0083 (9) | −0.0005 (8) | 0.0008 (9) |
| O5 | 0.0443 (11) | 0.0498 (14) | 0.0473 (13) | 0.0012 (10) | −0.0190 (9) | 0.0032 (11) |
| O3 | 0.0865 (18) | 0.0670 (18) | 0.0645 (18) | −0.0429 (15) | 0.0359 (15) | −0.0146 (14) |
| C13 | 0.0264 (12) | 0.0407 (15) | 0.0285 (13) | 0.0015 (11) | −0.0008 (10) | 0.0030 (11) |
| C11 | 0.0354 (13) | 0.0309 (14) | 0.0306 (13) | −0.0029 (11) | −0.0014 (10) | 0.0005 (11) |
| C10 | 0.0235 (11) | 0.0307 (13) | 0.0250 (12) | −0.0002 (10) | 0.0031 (9) | 0.0025 (10) |
| C14 | 0.0300 (12) | 0.0396 (16) | 0.0351 (14) | −0.0079 (11) | −0.0017 (11) | −0.0065 (12) |
| C15 | 0.0319 (12) | 0.0268 (13) | 0.0345 (14) | −0.0013 (10) | 0.0050 (11) | 0.0004 (11) |
| C12 | 0.0384 (13) | 0.0300 (14) | 0.0344 (14) | 0.0038 (11) | 0.0017 (11) | 0.0051 (11) |
| C9—C9A | 1.513 (3) | C4—C3 | 1.518 (6) |
| C9—C10 | 1.523 (3) | C4—H4A | 0.9700 |
| C9—C8A | 1.533 (4) | C4—H4B | 0.9700 |
| C9—H9 | 0.9800 | C7—H7A | 0.9700 |
| C9A—C4A | 1.345 (4) | C7—H7B | 0.9700 |
| C9A—C1 | 1.458 (4) | C2—C3 | 1.487 (6) |
| C4A—O1 | 1.360 (3) | C2—H2A | 0.9700 |
| C4A—C4 | 1.492 (4) | C2—H2B | 0.9700 |
| C8A—C4B | 1.512 (3) | C3—H3A | 0.9700 |
| C8A—C8 | 1.518 (4) | C3—H3B | 0.9700 |
| C8A—H13 | 0.9800 | O4—H4 | 0.8200 |
| C5—C4B | 1.508 (4) | O5—C13 | 1.371 (3) |
| C5—C6 | 1.521 (5) | O5—H5 | 0.8200 |
| C5—H5A | 0.9700 | C13—C12 | 1.373 (4) |
| C5—H5B | 0.9700 | C13—C14 | 1.391 (4) |
| C8—O3 | 1.204 (4) | C11—C12 | 1.388 (4) |
| C8—C7 | 1.507 (5) | C11—C10 | 1.388 (4) |
| C6—C7 | 1.532 (5) | C11—H19 | 0.9300 |
| C6—H6A | 0.9700 | C10—C15 | 1.387 (4) |
| C6—H6B | 0.9700 | C14—C15 | 1.381 (4) |
| C1—O2 | 1.225 (4) | C14—H16 | 0.9300 |
| C1—C2 | 1.502 (5) | C15—H15 | 0.9300 |
| C4B—O4 | 1.416 (4) | C12—H18 | 0.9300 |
| C4B—O1 | 1.443 (3) | ||
| C9A—C9—C10 | 110.6 (2) | C3—C4—H4A | 109.5 |
| C9A—C9—C8A | 110.6 (2) | C4A—C4—H4B | 109.5 |
| C10—C9—C8A | 110.0 (2) | C3—C4—H4B | 109.5 |
| C9A—C9—H9 | 108.5 | H4A—C4—H4B | 108.1 |
| C10—C9—H9 | 108.5 | C8—C7—C6 | 111.9 (3) |
| C8A—C9—H9 | 108.5 | C8—C7—H7A | 109.2 |
| C4A—C9A—C1 | 119.1 (2) | C6—C7—H7A | 109.2 |
| C4A—C9A—C9 | 122.6 (2) | C8—C7—H7B | 109.2 |
| C1—C9A—C9 | 117.8 (2) | C6—C7—H7B | 109.2 |
| C9A—C4A—O1 | 123.3 (2) | H7A—C7—H7B | 107.9 |
| C9A—C4A—C4 | 124.6 (3) | C3—C2—C1 | 113.4 (3) |
| O1—C4A—C4 | 112.0 (2) | C3—C2—H2A | 108.9 |
| C4B—C8A—C8 | 109.8 (2) | C1—C2—H2A | 108.9 |
| C4B—C8A—C9 | 114.0 (2) | C3—C2—H2B | 108.9 |
| C8—C8A—C9 | 114.2 (2) | C1—C2—H2B | 108.9 |
| C4B—C8A—H13 | 106.0 | H2A—C2—H2B | 107.7 |
| C8—C8A—H13 | 106.0 | C2—C3—C4 | 111.7 (4) |
| C9—C8A—H13 | 106.0 | C2—C3—H3A | 109.3 |
| C4B—C5—C6 | 109.9 (3) | C4—C3—H3A | 109.3 |
| C4B—C5—H5A | 109.7 | C2—C3—H3B | 109.3 |
| C6—C5—H5A | 109.7 | C4—C3—H3B | 109.3 |
| C4B—C5—H5B | 109.7 | H3A—C3—H3B | 107.9 |
| C6—C5—H5B | 109.7 | C4A—O1—C4B | 114.3 (2) |
| H5A—C5—H5B | 108.2 | C4B—O4—H4 | 109.5 |
| O3—C8—C7 | 123.7 (3) | C13—O5—H5 | 109.5 |
| O3—C8—C8A | 122.0 (3) | O5—C13—C12 | 122.5 (3) |
| C7—C8—C8A | 114.2 (3) | O5—C13—C14 | 117.5 (2) |
| C5—C6—C7 | 111.1 (3) | C12—C13—C14 | 120.0 (2) |
| C5—C6—H6A | 109.4 | C12—C11—C10 | 121.2 (3) |
| C7—C6—H6A | 109.4 | C12—C11—H19 | 119.4 |
| C5—C6—H6B | 109.4 | C10—C11—H19 | 119.4 |
| C7—C6—H6B | 109.4 | C15—C10—C11 | 118.0 (2) |
| H6A—C6—H6B | 108.0 | C15—C10—C9 | 121.4 (2) |
| O2—C1—C9A | 121.3 (3) | C11—C10—C9 | 120.6 (2) |
| O2—C1—C2 | 120.7 (3) | C15—C14—C13 | 119.6 (3) |
| C9A—C1—C2 | 117.9 (3) | C15—C14—H16 | 120.2 |
| O4—C4B—O1 | 108.4 (2) | C13—C14—H16 | 120.2 |
| O4—C4B—C5 | 111.4 (2) | C14—C15—C10 | 121.3 (3) |
| O1—C4B—C5 | 107.6 (2) | C14—C15—H15 | 119.3 |
| O4—C4B—C8A | 107.3 (2) | C10—C15—H15 | 119.3 |
| O1—C4B—C8A | 109.7 (2) | C13—C12—C11 | 119.8 (3) |
| C5—C4B—C8A | 112.4 (2) | C13—C12—H18 | 120.1 |
| C4A—C4—C3 | 110.8 (3) | C11—C12—H18 | 120.1 |
| C4A—C4—H4A | 109.5 | ||
| C10—C9—C9A—C4A | 118.8 (3) | C9—C8A—C4B—C5 | 174.6 (2) |
| C8A—C9—C9A—C4A | −3.4 (3) | C9A—C4A—C4—C3 | 15.5 (5) |
| C10—C9—C9A—C1 | −68.9 (3) | O1—C4A—C4—C3 | −163.9 (3) |
| C8A—C9—C9A—C1 | 169.0 (2) | O3—C8—C7—C6 | 132.1 (4) |
| C1—C9A—C4A—O1 | −167.6 (3) | C8A—C8—C7—C6 | −50.7 (4) |
| C9—C9A—C4A—O1 | 4.7 (4) | C5—C6—C7—C8 | 52.4 (4) |
| C1—C9A—C4A—C4 | 13.1 (4) | O2—C1—C2—C3 | 159.2 (4) |
| C9—C9A—C4A—C4 | −174.7 (3) | C9A—C1—C2—C3 | −24.1 (5) |
| C9A—C9—C8A—C4B | −26.3 (3) | C1—C2—C3—C4 | 52.2 (6) |
| C10—C9—C8A—C4B | −148.8 (2) | C4A—C4—C3—C2 | −47.4 (5) |
| C9A—C9—C8A—C8 | −153.6 (2) | C9A—C4A—O1—C4B | 25.7 (4) |
| C10—C9—C8A—C8 | 83.9 (3) | C4—C4A—O1—C4B | −154.9 (2) |
| C4B—C8A—C8—O3 | −131.1 (3) | O4—C4B—O1—C4A | 62.6 (3) |
| C9—C8A—C8—O3 | −1.7 (4) | C5—C4B—O1—C4A | −176.7 (2) |
| C4B—C8A—C8—C7 | 51.6 (3) | C8A—C4B—O1—C4A | −54.2 (3) |
| C9—C8A—C8—C7 | −179.0 (3) | C12—C11—C10—C15 | 1.1 (4) |
| C4B—C5—C6—C7 | −56.4 (4) | C12—C11—C10—C9 | −177.3 (2) |
| C4A—C9A—C1—O2 | 167.8 (3) | C9A—C9—C10—C15 | 117.6 (3) |
| C9—C9A—C1—O2 | −4.8 (4) | C8A—C9—C10—C15 | −120.0 (2) |
| C4A—C9A—C1—C2 | −8.8 (4) | C9A—C9—C10—C11 | −64.0 (3) |
| C9—C9A—C1—C2 | 178.6 (3) | C8A—C9—C10—C11 | 58.4 (3) |
| C6—C5—C4B—O4 | −61.1 (3) | O5—C13—C14—C15 | −179.8 (3) |
| C6—C5—C4B—O1 | −179.8 (2) | C12—C13—C14—C15 | 0.9 (4) |
| C6—C5—C4B—C8A | 59.3 (3) | C13—C14—C15—C10 | 0.2 (4) |
| C8—C8A—C4B—O4 | 67.0 (3) | C11—C10—C15—C14 | −1.1 (4) |
| C9—C8A—C4B—O4 | −62.6 (3) | C9—C10—C15—C14 | 177.3 (2) |
| C8—C8A—C4B—O1 | −175.5 (2) | O5—C13—C12—C11 | 179.8 (3) |
| C9—C8A—C4B—O1 | 54.9 (3) | C14—C13—C12—C11 | −0.9 (4) |
| C8—C8A—C4B—C5 | −55.9 (3) | C10—C11—C12—C13 | −0.1 (4) |
| H··· | ||||
| O4—H4···O5i | 0.82 | 2.07 | 2.852 (3) | 160. |
| O5—H5···O2ii | 0.82 | 1.94 | 2.758 (4) | 175. |
| C4—H4B···O4iii | 0.97 | 2.50 | 3.274 (5) | 137. |
| C8A—H13···O3iv | 0.98 | 2.59 | 3.535 (4) | 161. |
| C12—H18···O2ii | 0.93 | 2.55 | 3.251 (4) | 132. |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O4—H4⋯O5i | 0.82 | 2.07 | 2.852 (3) | 160 |
| O5—H5⋯O2ii | 0.82 | 1.94 | 2.758 (4) | 175 |
| C4—H4 | 0.97 | 2.50 | 3.274 (5) | 137 |
| C8 | 0.98 | 2.59 | 3.535 (4) | 161 |
| C12—H18⋯O2ii | 0.93 | 2.55 | 3.251 (4) | 132 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .