| Literature DB >> 21522746 |
Wan-Sin Loh, Hoong-Kun Fun, B Palakshi Reddy, V Vijayakumar, S Sarveswari.
Abstract
In the title compound, C(20)H(22)O(5), an S(6) ring motif is formed by an intra-molecular C-H⋯O hydrogen bond, which contributes to the stabilization of the mol-ecule. In the xanthene system, the cyclo-hexane ring adopts a chair conformation, the cyclo-hexene ring adopts a half-boat conformation and the tetra-hydro-pyran ring adopts a half-chair conformation. The mean plane of the four essentially planar atoms of the tetra-hydro-pyran ring [r.m.s deviation = 0.092 (1) Å] forms a dihedral angle of 64.13 (6)° with the mean plane of the meth-oxy-phenyl group. In the crystal, inter-molecular O-H⋯O and weak C-H⋯O hydrogen bonds link mol-ecules into chains along the a axis, which are further stabilized by C-H⋯π inter-actions.Entities:
Year: 2010 PMID: 21522746 PMCID: PMC3050262 DOI: 10.1107/S1600536810050191
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H22O5 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 9956 reflections | |
| θ = 2.6–37.2° | |
| µ = 0.10 mm−1 | |
| α = 91.285 (1)° | |
| β = 101.251 (1)° | Block, colourless |
| γ = 101.129 (1)° | 0.44 × 0.23 × 0.10 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 4715 independent reflections |
| Radiation source: fine-focus sealed tube | 4132 reflections with |
| graphite | |
| φ and ω scans | θmax = 30.0°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 21213 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 4715 reflections | (Δ/σ)max < 0.001 |
| 231 parameters | Δρmax = 0.46 e Å−3 |
| 0 restraints | Δρmin = −0.25 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.99328 (11) | 0.05712 (9) | 0.14023 (5) | 0.01184 (15) | |
| O2 | 0.70333 (12) | 0.35590 (10) | 0.19525 (6) | 0.01849 (17) | |
| O3 | 0.34225 (11) | −0.15228 (10) | 0.17249 (5) | 0.01475 (16) | |
| O4 | 0.74431 (12) | 0.15152 (9) | 0.43898 (5) | 0.01407 (16) | |
| O5 | 1.11520 (11) | −0.03057 (9) | 0.28104 (5) | 0.01311 (15) | |
| C1 | 1.06767 (15) | 0.11229 (12) | 0.23546 (6) | 0.01072 (18) | |
| C2 | 1.24660 (15) | 0.25412 (13) | 0.23649 (7) | 0.01350 (19) | |
| H2A | 1.3340 | 0.2104 | 0.2039 | 0.016* | |
| H2B | 1.3158 | 0.2835 | 0.2986 | 0.016* | |
| C3 | 1.19583 (16) | 0.41749 (13) | 0.19413 (7) | 0.0163 (2) | |
| H3A | 1.1438 | 0.3927 | 0.1298 | 0.020* | |
| H3B | 1.3137 | 0.5066 | 0.2015 | 0.020* | |
| C4 | 1.04414 (17) | 0.48393 (13) | 0.23831 (8) | 0.0172 (2) | |
| H4A | 1.1005 | 0.5208 | 0.3012 | 0.021* | |
| H4B | 1.0064 | 0.5825 | 0.2075 | 0.021* | |
| C5 | 0.86650 (16) | 0.34065 (13) | 0.23232 (7) | 0.01310 (19) | |
| C6 | 0.90683 (15) | 0.17311 (12) | 0.27485 (6) | 0.01074 (18) | |
| H6A | 0.9570 | 0.2001 | 0.3398 | 0.013* | |
| C7 | 0.71877 (15) | 0.03250 (12) | 0.26338 (6) | 0.01037 (18) | |
| H7A | 0.6112 | 0.0933 | 0.2644 | 0.012* | |
| C8 | 0.67731 (15) | −0.05984 (12) | 0.17062 (6) | 0.01066 (18) | |
| C9 | 0.47820 (15) | −0.15295 (12) | 0.13264 (6) | 0.01103 (18) | |
| C10 | 0.43704 (15) | −0.24679 (13) | 0.04013 (7) | 0.01356 (19) | |
| H10A | 0.3871 | −0.1725 | −0.0052 | 0.016* | |
| H10B | 0.3363 | −0.3499 | 0.0383 | 0.016* | |
| C11 | 0.61838 (16) | −0.29864 (13) | 0.01678 (7) | 0.01432 (19) | |
| H11A | 0.6579 | −0.3863 | 0.0563 | 0.017* | |
| H11B | 0.5882 | −0.3473 | −0.0451 | 0.017* | |
| C12 | 0.78507 (16) | −0.14125 (13) | 0.02780 (7) | 0.01329 (19) | |
| H12A | 0.9051 | −0.1781 | 0.0224 | 0.016* | |
| H12B | 0.7561 | −0.0643 | −0.0200 | 0.016* | |
| C13 | 0.81329 (15) | −0.04614 (12) | 0.11791 (6) | 0.01064 (18) | |
| C14 | 0.71718 (14) | −0.09100 (12) | 0.33983 (6) | 0.01062 (18) | |
| C15 | 0.72872 (15) | −0.02412 (12) | 0.42848 (7) | 0.01140 (18) | |
| C16 | 0.72200 (16) | −0.13289 (13) | 0.49996 (7) | 0.01399 (19) | |
| H16A | 0.7337 | −0.0869 | 0.5585 | 0.017* | |
| C17 | 0.69757 (16) | −0.31127 (13) | 0.48290 (7) | 0.0150 (2) | |
| H17A | 0.6903 | −0.3844 | 0.5301 | 0.018* | |
| C18 | 0.68398 (16) | −0.38035 (13) | 0.39597 (7) | 0.0146 (2) | |
| H18A | 0.6674 | −0.4992 | 0.3847 | 0.018* | |
| C19 | 0.69553 (15) | −0.26938 (13) | 0.32551 (7) | 0.01285 (19) | |
| H19A | 0.6886 | −0.3158 | 0.2675 | 0.015* | |
| C20 | 0.79471 (17) | 0.22709 (13) | 0.52994 (7) | 0.0154 (2) | |
| H20A | 0.8251 | 0.3509 | 0.5289 | 0.023* | |
| H20B | 0.9066 | 0.1875 | 0.5625 | 0.023* | |
| H20C | 0.6861 | 0.1934 | 0.5593 | 0.023* | |
| H1O5 | 1.201 (3) | −0.067 (2) | 0.2552 (12) | 0.027 (4)* |
| O1 | 0.0112 (3) | 0.0143 (3) | 0.0096 (3) | −0.0001 (3) | 0.0038 (3) | −0.0002 (2) |
| O2 | 0.0168 (4) | 0.0169 (4) | 0.0226 (4) | 0.0053 (3) | 0.0039 (3) | 0.0048 (3) |
| O3 | 0.0130 (4) | 0.0158 (3) | 0.0160 (3) | 0.0021 (3) | 0.0054 (3) | −0.0011 (3) |
| O4 | 0.0207 (4) | 0.0119 (3) | 0.0100 (3) | 0.0039 (3) | 0.0036 (3) | −0.0005 (2) |
| O5 | 0.0144 (4) | 0.0141 (3) | 0.0132 (3) | 0.0058 (3) | 0.0053 (3) | 0.0034 (3) |
| C1 | 0.0112 (4) | 0.0117 (4) | 0.0091 (4) | 0.0014 (3) | 0.0027 (3) | 0.0007 (3) |
| C2 | 0.0111 (4) | 0.0148 (4) | 0.0141 (4) | −0.0001 (4) | 0.0041 (3) | 0.0004 (3) |
| C3 | 0.0160 (5) | 0.0134 (4) | 0.0194 (5) | −0.0004 (4) | 0.0065 (4) | 0.0020 (3) |
| C4 | 0.0175 (5) | 0.0116 (4) | 0.0229 (5) | 0.0006 (4) | 0.0076 (4) | 0.0002 (4) |
| C5 | 0.0158 (5) | 0.0115 (4) | 0.0129 (4) | 0.0022 (4) | 0.0058 (4) | 0.0000 (3) |
| C6 | 0.0114 (4) | 0.0110 (4) | 0.0098 (4) | 0.0015 (3) | 0.0030 (3) | 0.0000 (3) |
| C7 | 0.0110 (4) | 0.0109 (4) | 0.0093 (4) | 0.0018 (3) | 0.0026 (3) | 0.0003 (3) |
| C8 | 0.0119 (4) | 0.0099 (4) | 0.0099 (4) | 0.0019 (3) | 0.0021 (3) | 0.0003 (3) |
| C9 | 0.0125 (4) | 0.0097 (4) | 0.0112 (4) | 0.0026 (3) | 0.0029 (3) | 0.0014 (3) |
| C10 | 0.0132 (5) | 0.0143 (4) | 0.0122 (4) | 0.0009 (4) | 0.0025 (4) | −0.0024 (3) |
| C11 | 0.0161 (5) | 0.0126 (4) | 0.0140 (4) | 0.0012 (4) | 0.0044 (4) | −0.0025 (3) |
| C12 | 0.0156 (5) | 0.0137 (4) | 0.0108 (4) | 0.0014 (4) | 0.0052 (4) | −0.0016 (3) |
| C13 | 0.0119 (4) | 0.0098 (4) | 0.0099 (4) | 0.0016 (3) | 0.0021 (3) | 0.0010 (3) |
| C14 | 0.0098 (4) | 0.0121 (4) | 0.0100 (4) | 0.0017 (3) | 0.0027 (3) | 0.0014 (3) |
| C15 | 0.0106 (4) | 0.0121 (4) | 0.0118 (4) | 0.0021 (3) | 0.0032 (3) | 0.0004 (3) |
| C16 | 0.0155 (5) | 0.0157 (4) | 0.0109 (4) | 0.0028 (4) | 0.0035 (4) | 0.0014 (3) |
| C17 | 0.0162 (5) | 0.0153 (4) | 0.0139 (4) | 0.0025 (4) | 0.0039 (4) | 0.0046 (3) |
| C18 | 0.0159 (5) | 0.0119 (4) | 0.0155 (4) | 0.0020 (4) | 0.0026 (4) | 0.0017 (3) |
| C19 | 0.0130 (5) | 0.0130 (4) | 0.0122 (4) | 0.0022 (4) | 0.0022 (3) | −0.0003 (3) |
| C20 | 0.0189 (5) | 0.0158 (4) | 0.0112 (4) | 0.0043 (4) | 0.0020 (4) | −0.0025 (3) |
| O1—C13 | 1.3529 (12) | C8—C13 | 1.3574 (14) |
| O1—C1 | 1.4570 (11) | C8—C9 | 1.4607 (14) |
| O2—C5 | 1.2148 (13) | C9—C10 | 1.5151 (13) |
| O3—C9 | 1.2345 (12) | C10—C11 | 1.5253 (15) |
| O4—C15 | 1.3718 (12) | C10—H10A | 0.9700 |
| O4—C20 | 1.4350 (12) | C10—H10B | 0.9700 |
| O5—C1 | 1.3962 (11) | C11—C12 | 1.5227 (14) |
| O5—H1O5 | 0.874 (18) | C11—H11A | 0.9700 |
| C1—C2 | 1.5203 (14) | C11—H11B | 0.9700 |
| C1—C6 | 1.5345 (14) | C12—C13 | 1.4982 (13) |
| C2—C3 | 1.5255 (14) | C12—H12A | 0.9700 |
| C2—H2A | 0.9700 | C12—H12B | 0.9700 |
| C2—H2B | 0.9700 | C14—C19 | 1.3931 (13) |
| C3—C4 | 1.5378 (16) | C14—C15 | 1.4091 (13) |
| C3—H3A | 0.9700 | C15—C16 | 1.3964 (13) |
| C3—H3B | 0.9700 | C16—C17 | 1.3961 (14) |
| C4—C5 | 1.5098 (15) | C16—H16A | 0.9300 |
| C4—H4A | 0.9700 | C17—C18 | 1.3884 (14) |
| C4—H4B | 0.9700 | C17—H17A | 0.9300 |
| C5—C6 | 1.5344 (13) | C18—C19 | 1.3976 (14) |
| C6—C7 | 1.5412 (14) | C18—H18A | 0.9300 |
| C6—H6A | 0.9800 | C19—H19A | 0.9300 |
| C7—C8 | 1.5133 (13) | C20—H20A | 0.9600 |
| C7—C14 | 1.5276 (13) | C20—H20B | 0.9600 |
| C7—H7A | 0.9800 | C20—H20C | 0.9600 |
| C13—O1—C1 | 117.22 (7) | C8—C9—C10 | 118.74 (9) |
| C15—O4—C20 | 116.87 (8) | C9—C10—C11 | 112.70 (8) |
| C1—O5—H1O5 | 106.7 (11) | C9—C10—H10A | 109.1 |
| O5—C1—O1 | 107.99 (7) | C11—C10—H10A | 109.1 |
| O5—C1—C2 | 112.32 (8) | C9—C10—H10B | 109.1 |
| O1—C1—C2 | 104.81 (7) | C11—C10—H10B | 109.1 |
| O5—C1—C6 | 108.38 (8) | H10A—C10—H10B | 107.8 |
| O1—C1—C6 | 109.47 (8) | C12—C11—C10 | 110.02 (8) |
| C2—C1—C6 | 113.68 (8) | C12—C11—H11A | 109.7 |
| C1—C2—C3 | 113.12 (9) | C10—C11—H11A | 109.7 |
| C1—C2—H2A | 109.0 | C12—C11—H11B | 109.7 |
| C3—C2—H2A | 109.0 | C10—C11—H11B | 109.7 |
| C1—C2—H2B | 109.0 | H11A—C11—H11B | 108.2 |
| C3—C2—H2B | 109.0 | C13—C12—C11 | 110.92 (8) |
| H2A—C2—H2B | 107.8 | C13—C12—H12A | 109.5 |
| C2—C3—C4 | 111.06 (9) | C11—C12—H12A | 109.5 |
| C2—C3—H3A | 109.4 | C13—C12—H12B | 109.5 |
| C4—C3—H3A | 109.4 | C11—C12—H12B | 109.5 |
| C2—C3—H3B | 109.4 | H12A—C12—H12B | 108.0 |
| C4—C3—H3B | 109.4 | O1—C13—C8 | 123.96 (9) |
| H3A—C3—H3B | 108.0 | O1—C13—C12 | 111.00 (8) |
| C5—C4—C3 | 109.20 (8) | C8—C13—C12 | 125.03 (9) |
| C5—C4—H4A | 109.8 | C19—C14—C15 | 117.89 (9) |
| C3—C4—H4A | 109.8 | C19—C14—C7 | 122.94 (8) |
| C5—C4—H4B | 109.8 | C15—C14—C7 | 119.10 (8) |
| C3—C4—H4B | 109.8 | O4—C15—C16 | 123.04 (9) |
| H4A—C4—H4B | 108.3 | O4—C15—C14 | 115.90 (8) |
| O2—C5—C4 | 122.38 (9) | C16—C15—C14 | 121.05 (9) |
| O2—C5—C6 | 122.26 (9) | C17—C16—C15 | 119.48 (9) |
| C4—C5—C6 | 115.35 (9) | C17—C16—H16A | 120.3 |
| C5—C6—C1 | 109.28 (8) | C15—C16—H16A | 120.3 |
| C5—C6—C7 | 111.86 (8) | C18—C17—C16 | 120.50 (9) |
| C1—C6—C7 | 112.48 (8) | C18—C17—H17A | 119.8 |
| C5—C6—H6A | 107.7 | C16—C17—H17A | 119.8 |
| C1—C6—H6A | 107.7 | C17—C18—C19 | 119.31 (9) |
| C7—C6—H6A | 107.7 | C17—C18—H18A | 120.3 |
| C8—C7—C14 | 113.17 (8) | C19—C18—H18A | 120.3 |
| C8—C7—C6 | 109.55 (8) | C14—C19—C18 | 121.74 (9) |
| C14—C7—C6 | 114.28 (8) | C14—C19—H19A | 119.1 |
| C8—C7—H7A | 106.4 | C18—C19—H19A | 119.1 |
| C14—C7—H7A | 106.4 | O4—C20—H20A | 109.5 |
| C6—C7—H7A | 106.4 | O4—C20—H20B | 109.5 |
| C13—C8—C9 | 118.53 (9) | H20A—C20—H20B | 109.5 |
| C13—C8—C7 | 122.45 (9) | O4—C20—H20C | 109.5 |
| C9—C8—C7 | 118.73 (8) | H20A—C20—H20C | 109.5 |
| O3—C9—C8 | 121.80 (9) | H20B—C20—H20C | 109.5 |
| O3—C9—C10 | 119.41 (9) | ||
| C13—O1—C1—O5 | 71.99 (10) | C7—C8—C9—C10 | −179.45 (8) |
| C13—O1—C1—C2 | −168.09 (8) | O3—C9—C10—C11 | −156.92 (9) |
| C13—O1—C1—C6 | −45.81 (10) | C8—C9—C10—C11 | 25.45 (12) |
| O5—C1—C2—C3 | −175.06 (8) | C9—C10—C11—C12 | −53.49 (11) |
| O1—C1—C2—C3 | 67.95 (10) | C10—C11—C12—C13 | 50.03 (11) |
| C6—C1—C2—C3 | −51.54 (11) | C1—O1—C13—C8 | 20.22 (13) |
| C1—C2—C3—C4 | 54.04 (11) | C1—O1—C13—C12 | −160.09 (8) |
| C2—C3—C4—C5 | −55.21 (12) | C9—C8—C13—O1 | 169.98 (8) |
| C3—C4—C5—O2 | −122.06 (11) | C7—C8—C13—O1 | −3.74 (15) |
| C3—C4—C5—C6 | 56.91 (11) | C9—C8—C13—C12 | −9.66 (14) |
| O2—C5—C6—C1 | 125.76 (10) | C7—C8—C13—C12 | 176.62 (9) |
| C4—C5—C6—C1 | −53.20 (11) | C11—C12—C13—O1 | 160.59 (8) |
| O2—C5—C6—C7 | 0.54 (13) | C11—C12—C13—C8 | −19.73 (13) |
| C4—C5—C6—C7 | −178.43 (8) | C8—C7—C14—C19 | 4.92 (14) |
| O5—C1—C6—C5 | 174.47 (8) | C6—C7—C14—C19 | −121.40 (10) |
| O1—C1—C6—C5 | −67.98 (10) | C8—C7—C14—C15 | −171.98 (9) |
| C2—C1—C6—C5 | 48.83 (11) | C6—C7—C14—C15 | 61.70 (12) |
| O5—C1—C6—C7 | −60.66 (10) | C20—O4—C15—C16 | 12.66 (14) |
| O1—C1—C6—C7 | 56.89 (10) | C20—O4—C15—C14 | −168.10 (9) |
| C2—C1—C6—C7 | 173.70 (8) | C19—C14—C15—O4 | −178.20 (9) |
| C5—C6—C7—C8 | 82.61 (9) | C7—C14—C15—O4 | −1.14 (14) |
| C1—C6—C7—C8 | −40.82 (10) | C19—C14—C15—C16 | 1.06 (15) |
| C5—C6—C7—C14 | −149.21 (8) | C7—C14—C15—C16 | 178.12 (9) |
| C1—C6—C7—C14 | 87.36 (10) | O4—C15—C16—C17 | 177.27 (10) |
| C14—C7—C8—C13 | −114.03 (10) | C14—C15—C16—C17 | −1.94 (16) |
| C6—C7—C8—C13 | 14.77 (12) | C15—C16—C17—C18 | 1.30 (16) |
| C14—C7—C8—C9 | 72.27 (11) | C16—C17—C18—C19 | 0.17 (16) |
| C6—C7—C8—C9 | −158.94 (8) | C15—C14—C19—C18 | 0.46 (15) |
| C13—C8—C9—O3 | −170.97 (9) | C7—C14—C19—C18 | −176.48 (9) |
| C7—C8—C9—O3 | 2.98 (14) | C17—C18—C19—C14 | −1.07 (16) |
| C13—C8—C9—C10 | 6.60 (13) |
| Cg1 is the centroid of the C14–C19 ring. |
| H··· | ||||
| O5—H1O5···O3i | 0.87 (2) | 1.93 (2) | 2.7877 (11) | 166.3 (18) |
| C6—H6A···O4 | 0.98 | 2.32 | 2.9266 (12) | 120 |
| C16—H16A···O5ii | 0.93 | 2.53 | 3.4172 (13) | 160 |
| C20—H20B···Cg1ii | 0.96 | 2.67 | 3.5206 (13) | 147 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C14–C19 ring.
| H⋯ | ||||
|---|---|---|---|---|
| O5—H1 | 0.87 (2) | 1.93 (2) | 2.7877 (11) | 166.3 (18) |
| C6—H6 | 0.98 | 2.32 | 2.9266 (12) | 120 |
| C16—H16 | 0.93 | 2.53 | 3.4172 (13) | 160 |
| C20—H20 | 0.96 | 2.67 | 3.5206 (13) | 147 |
Symmetry codes: (i) ; (ii) .