Literature DB >> 2205836

The repair patch of E. coli (A)BC excinuclease.

A Sancar, J E Hearst.   

Abstract

The size of repair patch made by E. coli DNA polymerase I (Poll) following the removal of a thymine-psoralen monoadduct by E. coli (A)BC excinuclease was determined by using an M13mp19 DNA with a single psoralen monoadduct at the polylinker region. Incubation of this substrate with (A)BC excinuclease, Poll and a combination of 3 dnTP plus 1 dNTP(alpha S) for each nucleotide, and DNA ligase resulted in a repair patch with phosphorothioate linkages. The preferential hydrolysis of phosphorothioate bonds by heating in iodoethanol revealed a patch size--with minimal nick translation--equal in length to the 12 nucleotide gap generated by this excision nuclease.

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Year:  1990        PMID： 2205836      PMCID： PMC332122          DOI： 10.1093/nar/18.17.5051

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  14 in total

1.  Amplification and purification of UvrA, UvrB, and UvrC proteins of Escherichia coli.

Authors:  D C Thomas; M Levy; A Sancar
Journal:  J Biol Chem       Date:  1985-08-15       Impact factor: 5.157

2.  Involvement of helicase II (uvrD gene product) and DNA polymerase I in excision mediated by the uvrABC protein complex.

Authors:  P R Caron; S R Kushner; L Grossman
Journal:  Proc Natl Acad Sci U S A       Date:  1985-08       Impact factor: 11.205

3.  Dimer excision and repair replication patch size in recL152 mutant of Escherichia coli K-12.

Authors:  R H Rothman
Journal:  J Bacteriol       Date:  1978-10       Impact factor: 3.490

4.  Patch size and base composition of ultraviolet light-induced repair synthesis in toluenized Escherichia coli.

Authors:  R Ben-Ishai; R Sharon
Journal:  J Mol Biol       Date:  1978-04-15       Impact factor: 5.469

5.  Heterogeneity of patch size in repair replicated DNA in Escherichia coli.

Authors:  P K Cooper; P C Hanawalt
Journal:  J Mol Biol       Date:  1972-06-14       Impact factor: 5.469

6.  Direct sequencing of polymerase chain reaction amplified DNA fragments through the incorporation of deoxynucleoside alpha-thiotriphosphates.

Authors:  K L Nakamaye; G Gish; F Eckstein; H P Vosberg
Journal:  Nucleic Acids Res       Date:  1988-11-11       Impact factor: 16.971

7.  Effect of the uvrD3 mutation on ultraviolet radiation-induced DNA-repair replication in Escherichia coli K12.

Authors:  K M Carlson; K C Smith
Journal:  Mutat Res       Date:  1981-12       Impact factor: 2.433

8.  Repair replication in Escherichia coli as measured by the photolysis of bromodeoxyuridine.

Authors:  R D Ley; R B Setlow
Journal:  Biophys J       Date:  1972-04       Impact factor: 4.033

9.  DNA and RNA sequence determination based on phosphorothioate chemistry.

Authors:  G Gish; F Eckstein
Journal:  Science       Date:  1988-06-10       Impact factor: 47.728

10.  Dimer excision in Escherichia coli in the presence of caffeine.

Authors:  R H Rothman
Journal:  J Bacteriol       Date:  1980-07       Impact factor: 3.490
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  14 in total

1.  Localization of UvrA and effect of DNA damage on the chromosome of Bacillus subtilis.

Authors:  Bradley T Smith; Alan D Grossman; Graham C Walker
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

2.  Identification and characterization of Escherichia coli DNA helicase II mutants that exhibit increased unwinding efficiency.

Authors:  G Zhang; E Deng; L Baugh; S R Kushner
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

Review 3.  Molecular mechanisms and genomic maps of DNA excision repair in Escherichia coli and humans.

Authors:  Jinchuan Hu; Christopher P Selby; Sheera Adar; Ogun Adebali; Aziz Sancar
Journal:  J Biol Chem       Date:  2017-08-10       Impact factor: 5.157

4.  Structure of the gene complementing uvr-402 in Streptococcus pneumoniae: homology with Escherichia coli uvrB and the homologous gene in Micrococcus luteus.

Authors:  N Sicard; J Oreglia; A M Estevenon
Journal:  J Bacteriol       Date:  1992-04       Impact factor: 3.490

Review 5.  DNA repair and genome maintenance in Bacillus subtilis.

Authors:  Justin S Lenhart; Jeremy W Schroeder; Brian W Walsh; Lyle A Simmons
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

6.  Removal of deoxyinosine from the Escherichia coli chromosome as studied by oligonucleotide transformation.

Authors:  Bernard Weiss
Journal:  DNA Repair (Amst)       Date:  2007-11-05

7.  Mycobacteria excise DNA damage in 12- or 13-nucleotide-long oligomers by prokaryotic-type dual incisions and performs transcription-coupled repair.

Authors:  Christopher P Selby; Laura A Lindsey-Boltz; Yanyan Yang; Aziz Sancar
Journal:  J Biol Chem       Date:  2020-10-21       Impact factor: 5.157

8.  Exploring damage recognition models in prokaryotic nucleotide excision repair with a benzo[a]pyrene-derived lesion in UvrB.

Authors:  Lei Jia; Konstantin Kropachev; Shuang Ding; Bennett Van Houten; Nicholas E Geacintov; Suse Broyde
Journal:  Biochemistry       Date:  2009-09-29       Impact factor: 3.162

9.  Effect of cross-link structure on DNA interstrand cross-link repair synthesis.

Authors:  Michael B Smeaton; Erica M Hlavin; Anne M Noronha; Sebastian P Murphy; Christopher J Wilds; Paul S Miller
Journal:  Chem Res Toxicol       Date:  2009-07       Impact factor: 3.739

10.  Human nucleotide excision nuclease removes thymine dimers from DNA by incising the 22nd phosphodiester bond 5' and the 6th phosphodiester bond 3' to the photodimer.

Authors:  J C Huang; D L Svoboda; J T Reardon; A Sancar
Journal:  Proc Natl Acad Sci U S A       Date:  1992-04-15       Impact factor: 11.205
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