Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Genome sequence of the white koji mold Aspergillus kawachii IFO 4308, used for brewing the Japanese distilled spirit shochu.

Literature DB >> 22045919

Genome sequence of the white koji mold Aspergillus kawachii IFO 4308, used for brewing the Japanese distilled spirit shochu.

Taiki Futagami¹, Kazuki Mori, Ayaka Yamashita, Shotaro Wada, Yasuhiro Kajiwara, Hideharu Takashita, Toshiro Omori, Kaoru Takegawa, Kosuke Tashiro, Satoru Kuhara, Masatoshi Goto.

Abstract

The filamentous fungus Aspergillus kawachii has traditionally been used for brewing the Japanese distilled spirit shochu. A. kawachii characteristically hyperproduces citric acid and a variety of polysaccharide glycoside hydrolases. Here the genome sequence of A. kawachii IFO 4308 was determined and annotated. Analysis of the sequence may provide insight into the properties of this fungus that make it superior for use in shochu production, leading to the further development of A. kawachii for industrial applications.

Entities: Chemical Species

Mesh：

Substances：

Year: 2011 PMID： 22045919 PMCID： PMC3209066 DOI： 10.1128/EC.05224-11

Source DB: PubMed Journal: Eukaryot Cell ISSN： 1535-9786

11 in total

1. AUGUSTUS: a web server for gene finding in eukaryotes.

Authors: Mario Stanke; Rasmus Steinkamp; Stephan Waack; Burkhard Morgenstern
Journal: Nucleic Acids Res Date: 2004-07-01 Impact factor: 16.971

2. Molecular biological researches of Kuro-Koji molds, their classification and safety.

Authors: Osamu Yamada; Ryo Takara; Ryoko Hamada; Risa Hayashi; Masatoshi Tsukahara; Shigeaki Mikami
Journal: J Biosci Bioeng Date: 2011-09 Impact factor: 2.894

3. Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88.

Authors: Mikael R Andersen; Margarita P Salazar; Peter J Schaap; Peter J I van de Vondervoort; David Culley; Jette Thykaer; Jens C Frisvad; Kristian F Nielsen; Richard Albang; Kaj Albermann; Randy M Berka; Gerhard H Braus; Susanna A Braus-Stromeyer; Luis M Corrochano; Ziyu Dai; Piet W M van Dijck; Gerald Hofmann; Linda L Lasure; Jon K Magnuson; Hildegard Menke; Martin Meijer; Susan L Meijer; Jakob B Nielsen; Michael L Nielsen; Albert J J van Ooyen; Herman J Pel; Lars Poulsen; Rob A Samson; Hein Stam; Adrian Tsang; Johannes M van den Brink; Alex Atkins; Andrea Aerts; Harris Shapiro; Jasmyn Pangilinan; Asaf Salamov; Yigong Lou; Erika Lindquist; Susan Lucas; Jane Grimwood; Igor V Grigoriev; Christian P Kubicek; Diego Martinez; Noël N M E van Peij; Johannes A Roubos; Jens Nielsen; Scott E Baker
Journal: Genome Res Date: 2011-05-04 Impact factor: 9.043

4. A polyketide synthase gene required for ochratoxin A biosynthesis in Aspergillus ochraceus.

Authors: J O'Callaghan; M X Caddick; A D W Dobson
Journal: Microbiology Date: 2003-12 Impact factor: 2.777

5. Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88.

Authors: Herman J Pel; Johannes H de Winde; David B Archer; Paul S Dyer; Gerald Hofmann; Peter J Schaap; Geoffrey Turner; Ronald P de Vries; Richard Albang; Kaj Albermann; Mikael R Andersen; Jannick D Bendtsen; Jacques A E Benen; Marco van den Berg; Stefaan Breestraat; Mark X Caddick; Roland Contreras; Michael Cornell; Pedro M Coutinho; Etienne G J Danchin; Alfons J M Debets; Peter Dekker; Piet W M van Dijck; Alard van Dijk; Lubbert Dijkhuizen; Arnold J M Driessen; Christophe d'Enfert; Steven Geysens; Coenie Goosen; Gert S P Groot; Piet W J de Groot; Thomas Guillemette; Bernard Henrissat; Marga Herweijer; Johannes P T W van den Hombergh; Cees A M J J van den Hondel; Rene T J M van der Heijden; Rachel M van der Kaaij; Frans M Klis; Harrie J Kools; Christian P Kubicek; Patricia A van Kuyk; Jürgen Lauber; Xin Lu; Marc J E C van der Maarel; Rogier Meulenberg; Hildegard Menke; Martin A Mortimer; Jens Nielsen; Stephen G Oliver; Maurien Olsthoorn; Karoly Pal; Noël N M E van Peij; Arthur F J Ram; Ursula Rinas; Johannes A Roubos; Cees M J Sagt; Monika Schmoll; Jibin Sun; David Ussery; Janos Varga; Wouter Vervecken; Peter J J van de Vondervoort; Holger Wedler; Han A B Wösten; An-Ping Zeng; Albert J J van Ooyen; Jaap Visser; Hein Stam
Journal: Nat Biotechnol Date: 2007-01-28 Impact factor: 54.908

6. Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus.

Authors: William C Nierman; Arnab Pain; Michael J Anderson; Jennifer R Wortman; H Stanley Kim; Javier Arroyo; Matthew Berriman; Keietsu Abe; David B Archer; Clara Bermejo; Joan Bennett; Paul Bowyer; Dan Chen; Matthew Collins; Richard Coulsen; Robert Davies; Paul S Dyer; Mark Farman; Nadia Fedorova; Natalie Fedorova; Tamara V Feldblyum; Reinhard Fischer; Nigel Fosker; Audrey Fraser; Jose L García; Maria J García; Arlette Goble; Gustavo H Goldman; Katsuya Gomi; Sam Griffith-Jones; Ryan Gwilliam; Brian Haas; Hubertus Haas; David Harris; H Horiuchi; Jiaqi Huang; Sean Humphray; Javier Jiménez; Nancy Keller; Hoda Khouri; Katsuhiko Kitamoto; Tetsuo Kobayashi; Sven Konzack; Resham Kulkarni; Toshitaka Kumagai; Anne Lafon; Anne Lafton; Jean-Paul Latgé; Weixi Li; Angela Lord; Charles Lu; William H Majoros; Gregory S May; Bruce L Miller; Yasmin Mohamoud; Maria Molina; Michel Monod; Isabelle Mouyna; Stephanie Mulligan; Lee Murphy; Susan O'Neil; Ian Paulsen; Miguel A Peñalva; Mihaela Pertea; Claire Price; Bethan L Pritchard; Michael A Quail; Ester Rabbinowitsch; Neil Rawlins; Marie-Adele Rajandream; Utz Reichard; Hubert Renauld; Geoffrey D Robson; Santiago Rodriguez de Córdoba; Jose M Rodríguez-Peña; Catherine M Ronning; Simon Rutter; Steven L Salzberg; Miguel Sanchez; Juan C Sánchez-Ferrero; David Saunders; Kathy Seeger; Rob Squares; Steven Squares; Michio Takeuchi; Fredj Tekaia; Geoffrey Turner; Carlos R Vazquez de Aldana; Janice Weidman; Owen White; John Woodward; Jae-Hyuk Yu; Claire Fraser; James E Galagan; Kiyoshi Asai; Masayuki Machida; Neil Hall; Bart Barrell; David W Denning
Journal: Nature Date: 2005-12-22 Impact factor: 49.962

7. Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae.

Authors: James E Galagan; Sarah E Calvo; Christina Cuomo; Li-Jun Ma; Jennifer R Wortman; Serafim Batzoglou; Su-In Lee; Meray Baştürkmen; Christina C Spevak; John Clutterbuck; Vladimir Kapitonov; Jerzy Jurka; Claudio Scazzocchio; Mark Farman; Jonathan Butler; Seth Purcell; Steve Harris; Gerhard H Braus; Oliver Draht; Silke Busch; Christophe D'Enfert; Christiane Bouchier; Gustavo H Goldman; Deborah Bell-Pedersen; Sam Griffiths-Jones; John H Doonan; Jaehyuk Yu; Kay Vienken; Arnab Pain; Michael Freitag; Eric U Selker; David B Archer; Miguel A Peñalva; Berl R Oakley; Michelle Momany; Toshihiro Tanaka; Toshitaka Kumagai; Kiyoshi Asai; Masayuki Machida; William C Nierman; David W Denning; Mark Caddick; Michael Hynes; Mathieu Paoletti; Reinhard Fischer; Bruce Miller; Paul Dyer; Matthew S Sachs; Stephen A Osmani; Bruce W Birren
Journal: Nature Date: 2005-12-22 Impact factor: 49.962

8. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs.

Authors: Peter Schattner; Angela N Brooks; Todd M Lowe
Journal: Nucleic Acids Res Date: 2005-07-01 Impact factor: 16.971

9. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics.

Authors: Brandi L Cantarel; Pedro M Coutinho; Corinne Rancurel; Thomas Bernard; Vincent Lombard; Bernard Henrissat
Journal: Nucleic Acids Res Date: 2008-10-05 Impact factor: 16.971

Review 10. Genomics of Aspergillus oryzae: learning from the history of Koji mold and exploration of its future.

Authors: Masayuki Machida; Osamu Yamada; Katsuya Gomi
Journal: DNA Res Date: 2008-08 Impact factor: 4.458

21 in total

1. Transcriptomic analysis of temperature responses of Aspergillus kawachii during barley koji production.

Authors: Taiki Futagami; Kazuki Mori; Shotaro Wada; Hiroko Ida; Yasuhiro Kajiwara; Hideharu Takashita; Kosuke Tashiro; Osamu Yamada; Toshiro Omori; Satoru Kuhara; Masatoshi Goto
Journal: Appl Environ Microbiol Date: 2015-02 Impact factor: 4.792

2. Genome sequences of 24 Aspergillus niger sensu stricto strains to study strain diversity, heterokaryon compatibility, and sexual reproduction.

Authors: Sjoerd J Seekles; Maarten Punt; Niki Savelkoel; Jos Houbraken; Han A B Wösten; Robin A Ohm; Arthur F J Ram
Journal: G3 (Bethesda) Date: 2022-07-06 Impact factor: 3.542

Review 3. The genomics of microbial domestication in the fermented food environment.

Authors: John G Gibbons; David C Rinker
Journal: Curr Opin Genet Dev Date: 2015-08-25 Impact factor: 5.578

Review 4. The function and evolution of the Aspergillus genome.

Authors: John G Gibbons; Antonis Rokas
Journal: Trends Microbiol Date: 2012-10-17 Impact factor: 17.079

5. A molecular and bioinformatic study on the ochratoxin A (OTA)-producing Aspergillus affinis (section Circumdati).

Authors: Domenico Davolos; Biancamaria Pietrangeli
Journal: Mycotoxin Res Date: 2014-03-26 Impact factor: 3.833

6. LaeA Controls Citric Acid Production through Regulation of the Citrate Exporter-Encoding cexA Gene in Aspergillus luchuensis mut. kawachii.

Authors: Chihiro Kadooka; Eri Nakamura; Kazuki Mori; Kayu Okutsu; Yumiko Yoshizaki; Kazunori Takamine; Masatoshi Goto; Hisanori Tamaki; Taiki Futagami
Journal: Appl Environ Microbiol Date: 2020-02-18 Impact factor: 4.792

7. Identification of telomerase RNAs from filamentous fungi reveals conservation with vertebrates and yeasts.

Authors: Paulius V Kuprys; Shaun M Davis; Tyler M Hauer; Max Meltser; Yehuda Tzfati; Karen E Kirk
Journal: PLoS One Date: 2013-03-14 Impact factor: 3.240

8. Draft Genome Sequence of Rhizopus chinensis CCTCCM201021, Used for Brewing Traditional Chinese Alcoholic Beverages.

Authors: Dong Wang; Rong Wu; Yan Xu; Ming Li
Journal: Genome Announc Date: 2013-02-28

9. Identification and Characterization of a Novel Galactofuranose-Specific β-D-Galactofuranosidase from Streptomyces Species.

Authors: Emiko Matsunaga; Yujiro Higuchi; Kazuki Mori; Nao Yairo; Takuji Oka; Saki Shinozuka; Kosuke Tashiro; Minoru Izumi; Satoru Kuhara; Kaoru Takegawa
Journal: PLoS One Date: 2015-09-04 Impact factor: 3.240

10. Genomic characteristics and comparative genomics analysis of Penicillium chrysogenum KF-25.

Authors: Qin Peng; Yihui Yuan; Meiying Gao; Xupeng Chen; Biao Liu; Pengming Liu; Yan Wu; Dandan Wu
Journal: BMC Genomics Date: 2014-02-21 Impact factor: 3.969