Literature DB >> 25501485

Transcriptomic analysis of temperature responses of Aspergillus kawachii during barley koji production.

Taiki Futagami, Kazuki Mori, Shotaro Wada, Hiroko Ida, Yasuhiro Kajiwara, Hideharu Takashita, Kosuke Tashiro, Osamu Yamada, Toshiro Omori, Satoru Kuhara, Masatoshi Goto.   

Abstract

The koji mold Aspergillus kawachii is used for making the Japanese distilled spirit shochu. During shochu production, A. kawachii is grown in solid-state culture (koji) on steamed grains, such as rice or barley, to convert the grain starch to glucose and produce citric acid. During this process, the cultivation temperature of A. kawachii is gradually increased to 40 °C and is then lowered to 30 °C. This temperature modulation is important for stimulating amylase activity and the accumulation of citric acid. However, the effects of temperature on A. kawachii at the gene expression level have not been elucidated. In this study, we investigated the effect of solid-state cultivation temperature on gene expression for A. kawachii grown on barley. The results of DNA microarray and gene ontology analyses showed that the expression of genes involved in the glycerol, trehalose, and pentose phosphate metabolic pathways, which function downstream of glycolysis, was downregulated by shifting the cultivation temperature from 40 to 30 °C. In addition, significantly reduced expression of genes related to heat shock responses and increased expression of genes related with amino acid transport were also observed. These results suggest that solid-state cultivation at 40 °C is stressful for A. kawachii and that heat adaptation leads to reduced citric acid accumulation through activation of pathways branching from glycolysis. The gene expression profile of A. kawachii elucidated in this study is expected to contribute to the understanding of gene regulation during koji production and optimization of the industrially desirable characteristics of A. kawachii.

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Year:  2015        PMID: 25501485      PMCID: PMC4309687          DOI: 10.1128/AEM.03483-14

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  40 in total

1.  The Gene Ontology (GO) database and informatics resource.

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Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  Modeling approach to control of carbohydrate metabolism during citric acid accumulation by Aspergillus niger: II. Sensitivity analysis.

Authors:  N V Torres
Journal:  Biotechnol Bioeng       Date:  1994-06-05       Impact factor: 4.530

3.  Teasing apart a three-way symbiosis: transcriptome analyses of Curvularia protuberata in response to viral infection and heat stress.

Authors:  Mustafa R Morsy; Jennifer Oswald; Ji He; Yuhong Tang; Marilyn J Roossinck
Journal:  Biochem Biophys Res Commun       Date:  2010-09-16       Impact factor: 3.575

Review 4.  Taxonomic re-evaluation of black koji molds.

Authors:  Seung-Beom Hong; Osamu Yamada; Robert A Samson
Journal:  Appl Microbiol Biotechnol       Date:  2013-11-27       Impact factor: 4.813

5.  Biodiversity and evolution of primary carbon metabolism in Aspergillus nidulans and other Aspergillus spp.

Authors:  Michel Flipphi; Jibin Sun; Xavier Robellet; Levente Karaffa; Erzsébet Fekete; An-Ping Zeng; Christian P Kubicek
Journal:  Fungal Genet Biol       Date:  2009-03       Impact factor: 3.495

6.  Heat-shock-induced oxidative stress and antioxidant response in Aspergillus niger 26.

Authors:  Radoslav I Abrashev; Svetlana B Pashova; Lilyana N Stefanova; Spassen V Vassilev; Pavlina A Dolashka-Angelova; Maria B Angelova
Journal:  Can J Microbiol       Date:  2008-12       Impact factor: 2.419

7.  Modeling approach to control of carbohydrate metabolism during citric acid accumulation by Aspergillus niger: I. Model definition and stability of the steady state.

Authors:  N V Torres
Journal:  Biotechnol Bioeng       Date:  1994-06-05       Impact factor: 4.530

Review 8.  The function and evolution of the Aspergillus genome.

Authors:  John G Gibbons; Antonis Rokas
Journal:  Trends Microbiol       Date:  2012-10-17       Impact factor: 17.079

Review 9.  Some distinguishable properties between acid-stable and neutral types of alpha-amylases from acid-producing koji.

Authors:  Toshihiko Suganuma; Kiyotaka Fujita; Kanefumi Kitahara
Journal:  J Biosci Bioeng       Date:  2007-11       Impact factor: 2.894

10.  The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations.

Authors:  Gustavo C Cerqueira; Martha B Arnaud; Diane O Inglis; Marek S Skrzypek; Gail Binkley; Matt Simison; Stuart R Miyasato; Jonathan Binkley; Joshua Orvis; Prachi Shah; Farrell Wymore; Gavin Sherlock; Jennifer R Wortman
Journal:  Nucleic Acids Res       Date:  2013-11-04       Impact factor: 16.971

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  8 in total

1.  Mitochondrial Citrate Transporters CtpA and YhmA Are Required for Extracellular Citric Acid Accumulation and Contribute to Cytosolic Acetyl Coenzyme A Generation in Aspergillus luchuensis mut. kawachii.

Authors:  Chihiro Kadooka; Kosuke Izumitsu; Masahira Onoue; Kayu Okutsu; Yumiko Yoshizaki; Kazunori Takamine; Masatoshi Goto; Hisanori Tamaki; Taiki Futagami
Journal:  Appl Environ Microbiol       Date:  2019-04-04       Impact factor: 4.792

2.  LaeA Controls Citric Acid Production through Regulation of the Citrate Exporter-Encoding cexA Gene in Aspergillus luchuensis mut. kawachii.

Authors:  Chihiro Kadooka; Eri Nakamura; Kazuki Mori; Kayu Okutsu; Yumiko Yoshizaki; Kazunori Takamine; Masatoshi Goto; Hisanori Tamaki; Taiki Futagami
Journal:  Appl Environ Microbiol       Date:  2020-02-18       Impact factor: 4.792

3.  Insights regarding sirtuin-dependent gene regulation during white koji production.

Authors:  Taiki Futagami; Masatoshi Goto
Journal:  Commun Integr Biol       Date:  2022-03-16

4.  Tryptamine, a Microbial Metabolite in Fermented Rice Bran Suppressed Lipopolysaccharide-Induced Inflammation in a Murine Macrophage Model.

Authors:  Afifah Zahra Agista; Sharon Angela Tanuseputero; Takuya Koseki; Slamet Budijanto; Halima Sultana; Yusuke Ohsaki; Chiu-Li Yeh; Suh-Ching Yang; Michio Komai; Hitoshi Shirakawa
Journal:  Int J Mol Sci       Date:  2022-09-23       Impact factor: 6.208

5.  Two Horizontally Transferred Xenobiotic Resistance Gene Clusters Associated with Detoxification of Benzoxazolinones by Fusarium Species.

Authors:  Anthony E Glenn; C Britton Davis; Minglu Gao; Scott E Gold; Trevor R Mitchell; Robert H Proctor; Jane E Stewart; Maurice E Snook
Journal:  PLoS One       Date:  2016-01-25       Impact factor: 3.240

6.  Different Polar Metabolites and Protein Profiles between High- and Low-Quality Japanese Ginjo Sake.

Authors:  Kei Takahashi; Hiromi Kohno
Journal:  PLoS One       Date:  2016-03-03       Impact factor: 3.240

7.  Genome sequence of Aspergillus luchuensis NBRC 4314.

Authors:  Osamu Yamada; Masayuki Machida; Akira Hosoyama; Masatoshi Goto; Toru Takahashi; Taiki Futagami; Youhei Yamagata; Michio Takeuchi; Tetsuo Kobayashi; Hideaki Koike; Keietsu Abe; Kiyoshi Asai; Masanori Arita; Nobuyuki Fujita; Kazuro Fukuda; Ken-Ichi Higa; Hiroshi Horikawa; Takeaki Ishikawa; Koji Jinno; Yumiko Kato; Kohtaro Kirimura; Osamu Mizutani; Kaoru Nakasone; Motoaki Sano; Yohei Shiraishi; Masatoshi Tsukahara; Katsuya Gomi
Journal:  DNA Res       Date:  2016-09-20       Impact factor: 4.458

Review 8.  Making Traditional Japanese Distilled Liquor, Shochu and Awamori, and the Contribution of White and Black Koji Fungi.

Authors:  Kei Hayashi; Yasuhiro Kajiwara; Taiki Futagami; Masatoshi Goto; Hideharu Takashita
Journal:  J Fungi (Basel)       Date:  2021-06-28
  8 in total

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