Literature DB >> 22015591

Estimating the carbonyl anharmonic vibrational frequency from affordable harmonic frequency calculations.

Aneta Buczek1, Teobald Kupka, Stephan P A Sauer, Małgorzata A Broda.   

Abstract

A linear correlation between harmonic and anharmonic frequencies of water calculated at B3LYP level of theory was observed with a number of basis sets. Similar relationships were found in both the gas phase and solution for several small molecules. The best correlation was found for C = O stretch mode in formaldehyde, formamide and N-methylacetamide. The average difference between B3LYP harmonic and anharmonic ν(C = O) frequencies calculated with several basis sets in these molecules was 30 cm(-1). The ad hoc correction of -30 cm(-1), added to harmonic frequencies of two different carbonyl groups present in a structure of a larger molecule was tested as a fast way of predicting anharmonic frequencies without elaborated calculations. The proposed approach was tested successfully on a larger molecule of E and Z isomers of N-acetyl-α,β-dehydrophenylalanine N',N'-dimethylamide [Ac-(E/Z)-ΔPhe-NMe(2)] and the estimated anharmonic ν(C = O) frequencies were close to directly calculated results.

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Year:  2011        PMID: 22015591     DOI: 10.1007/s00894-011-1262-6

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  17 in total

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Journal:  J Chem Phys       Date:  2004-02-15       Impact factor: 3.488

3.  Vibrational structure theory: new vibrational wave function methods for calculation of anharmonic vibrational energies and vibrational contributions to molecular properties.

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Journal:  Phys Chem Chem Phys       Date:  2007-03-23       Impact factor: 3.676

4.  Anharmonicity of amide modes.

Authors:  Jianping Wang; Robin M Hochstrasser
Journal:  J Phys Chem B       Date:  2006-03-02       Impact factor: 2.991

5.  Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density.

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Journal:  Phys Rev B Condens Matter       Date:  1988-01-15

6.  Experimental and theoretical NMR and IR studies of the side-chain orientation effects on the backbone conformation of dehydrophenylalanine residue.

Authors:  Aneta M Buczek; Tomasz Ptak; Teobald Kupka; Małgorzata A Broda
Journal:  Magn Reson Chem       Date:  2011-04-20       Impact factor: 2.447

7.  Effects of side-chain orientation on the backbone conformation of the dehydrophenylalanine residue. Theoretical and X-ray study.

Authors:  Aneta Buczek; Dawid Siodłak; Maciej Bujak; Małgorzata A Broda
Journal:  J Phys Chem B       Date:  2011-03-28       Impact factor: 2.991

8.  Estimation of formamide harmonic and anharmonic modes in the Kohn-Sham limit using the polarization consistent basis sets.

Authors:  Aneta Buczek; Teobald Kupka; Małgorzata A Broda
Journal:  J Mol Model       Date:  2011-01-26       Impact factor: 1.810

9.  Extrapolation of water and formaldehyde harmonic and anharmonic frequencies to the B3LYP/CBS limit using polarization consistent basis sets.

Authors:  Aneta Buczek; Teobald Kupka; Małgorzata A Broda
Journal:  J Mol Model       Date:  2010-12-14       Impact factor: 1.810

10.  The High-Resolution FTIR Far-Infrared Spectrum of Formamide.

Authors: 
Journal:  J Mol Spectrosc       Date:  1999-01       Impact factor: 1.507

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  2 in total

1.  DFT studies on the structural and vibrational properties of polyenes.

Authors:  Teobald Kupka; Aneta Buczek; Małgorzata A Broda; Michał Stachów; Przemysław Tarnowski
Journal:  J Mol Model       Date:  2016-04-06       Impact factor: 1.810

2.  Predicting the structure and vibrational frequencies of ethylene using harmonic and anharmonic approaches at the Kohn-Sham complete basis set limit.

Authors:  Aneta Buczek; Teobald Kupka; Małgorzata A Broda; Adriana Żyła
Journal:  J Mol Model       Date:  2016-01-22       Impact factor: 1.810

  2 in total

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