Literature DB >> 21506144

Experimental and theoretical NMR and IR studies of the side-chain orientation effects on the backbone conformation of dehydrophenylalanine residue.

Aneta M Buczek1, Tomasz Ptak, Teobald Kupka, Małgorzata A Broda.   

Abstract

Conformation of N-acetyl-(E)-dehydrophenylalanine N', N'-dimethylamide (Ac-(E)-ΔPhe-NMe(2)) in solution, a member of (E)-α, β-dehydroamino acids, was studied by NMR and infrared spectroscopy and the results were compared with those obtained for (Z) isomer. To support the spectroscopic interpretation, the Φ, Ψ potential energy surfaces were calculated at the MP2/6-31 + G(d,p) level of theory in chloroform solution modeled by the self-consistent reaction field-polarizable continuum model method. All minima were fully optimized by the MP2 method and their relative stabilities were analyzed in terms of π-conjugation, internal H-bonds and dipole interactions between carbonyl groups. The obtained NMR spectral features were compared with theoretical nuclear magnetic shieldings, calculated using Gauge Independent Atomic Orbitals (GIAO) approach and rescaled to theoretical chemical shifts using benzene as reference. The calculated indirect nuclear spin-spin coupling constants were compared with available experimental parameters.
Copyright © 2011 John Wiley & Sons, Ltd.

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Year:  2011        PMID: 21506144     DOI: 10.1002/mrc.2753

Source DB:  PubMed          Journal:  Magn Reson Chem        ISSN: 0749-1581            Impact factor:   2.447


  2 in total

1.  Estimating the carbonyl anharmonic vibrational frequency from affordable harmonic frequency calculations.

Authors:  Aneta Buczek; Teobald Kupka; Stephan P A Sauer; Małgorzata A Broda
Journal:  J Mol Model       Date:  2011-10-21       Impact factor: 1.810

2.  Didehydrophenylalanine, an abundant modification in the beta subunit of plant polygalacturonases.

Authors:  Kjell Sergeant; Bruno Printz; Annelie Gutsch; Marc Behr; Jenny Renaut; Jean-Francois Hausman
Journal:  PLoS One       Date:  2017-02-16       Impact factor: 3.240

  2 in total

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