Literature DB >> 22006309

Molecular study of worldwide distribution and diversity of soil animals.

Tiehang Wu1, Edward Ayres, Richard D Bardgett, Diana H Wall, James R Garey.   

Abstract

The global distribution of soil animals and the relationship of below-ground biodiversity to above-ground biodiversity are not well understood. We examined 17,516 environmental 18S rRNA gene sequences representing 20 phyla of soil animals sampled from 11 locations covering a range of biomes and latitudes around the world. No globally cosmopolitan taxa were found and only 14 of 2,259 operational taxonomic units (OTUs) found were common to four or more locations. Half of those were circumpolar and may reflect higher connectivity among circumpolar locations compared with other locations in the study. Even when OTU assembly criteria were relaxed to approximate the family taxonomic level, only 34 OTUs were common to four or more locations. A comparison of our diversity and community structure data to environmental factors suggests that below-ground animal diversity may be inversely related to above-ground biodiversity. Our data suggest that greater soil inorganic N and lower pH could explain the low below-ground biodiversity found at locations of high above-ground biodiversity. Our locations could also be characterized as being dominated by microarthropods or dominated by nematodes. Locations dominated by arthropods were primarily forests with lower soil pH, root biomass, mean annual temperature, low soil inorganic N and higher C:N, litter and moisture compared with nematode-dominated locations, which were mostly grasslands. Overall, our data indicate that small soil animals have distinct biogeographical distributions and provide unique evidence of the link between above-ground and below-ground biodiversity at a global scale.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22006309      PMCID: PMC3203765          DOI: 10.1073/pnas.1103824108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  13 in total

1.  Biodiversity hotspots for conservation priorities.

Authors:  N Myers; R A Mittermeier; C G Mittermeier; G A da Fonseca; J Kent
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

2.  Global dispersal of free-living microbial eukaryote species.

Authors:  Bland J Finlay
Journal:  Science       Date:  2002-05-10       Impact factor: 47.728

3.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

4.  Quantification of effects of season and nitrogen supply on tree below-ground carbon transfer to ectomycorrhizal fungi and other soil organisms in a boreal pine forest.

Authors:  Mona N Högberg; Maria J I Briones; Sonja G Keel; Daniel B Metcalfe; Catherine Campbell; Andrew J Midwood; Barry Thornton; Vaughan Hurry; Sune Linder; Torgny Näsholm; Peter Högberg
Journal:  New Phytol       Date:  2010-04-22       Impact factor: 10.151

5.  Ecometagenetics confirm high tropical rainforest nematode diversity.

Authors:  Dorota L Porazinska; Robin M Giblin-Davis; Alejandro Esquivel; Thomas O Powers; Way Sung; W Kelley Thomas
Journal:  Mol Ecol       Date:  2010-11-04       Impact factor: 6.185

6.  Linking aboveground and belowground diversity.

Authors:  Gerlinde B De Deyn; Wim H Van der Putten
Journal:  Trends Ecol Evol       Date:  2005-09-08       Impact factor: 17.712

7.  The noncosmopolitanism paradigm of freshwater zooplankton: insights from the global phylogeography of the predatory cladoceran Polyphemus pediculus (Linnaeus, 1761) (Crustacea, Onychopoda).

Authors:  S Xu; P D N Hebert; A A Kotov; M E Cristescu
Journal:  Mol Ecol       Date:  2009-11-11       Impact factor: 6.185

8.  Contrasting covariation of above- and belowground invertebrate species across plant genotypes.

Authors:  Martijn L Vandegehuchte; Eduardo de la Peña; Dries Bonte
Journal:  J Anim Ecol       Date:  2010-10-21       Impact factor: 5.091

9.  Scale-specific correlations between habitat heterogeneity and soil fauna diversity along a landscape structure gradient.

Authors:  Adam J Vanbergen; Allan D Watt; Ruth Mitchell; Anne-Marie Truscott; Stephen C F Palmer; Eva Ivits; Paul Eggleton; T Hefin Jones; José Paulo Sousa
Journal:  Oecologia       Date:  2007-05-31       Impact factor: 3.225

10.  ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences.

Authors:  Yijun Sun; Yunpeng Cai; Li Liu; Fahong Yu; Michael L Farrell; William McKendree; William Farmerie
Journal:  Nucleic Acids Res       Date:  2009-05-05       Impact factor: 16.971

View more
  34 in total

1.  Vegetation-associated impacts on arctic tundra bacterial and microeukaryotic communities.

Authors:  Yu Shi; Xingjia Xiang; Congcong Shen; Haiyan Chu; Josh D Neufeld; Virginia K Walker; Paul Grogan
Journal:  Appl Environ Microbiol       Date:  2014-10-31       Impact factor: 4.792

2.  Stochastic distribution of small soil eukaryotes resulting from high dispersal and drift in a local environment.

Authors:  Mohammad Bahram; Petr Kohout; Sten Anslan; Helery Harend; Kessy Abarenkov; Leho Tedersoo
Journal:  ISME J       Date:  2015-09-22       Impact factor: 10.302

3.  Temperature-based bioclimatic parameters can predict nematode metabolic footprints.

Authors:  Daya Ram Bhusal; Maria A Tsiafouli; Stefanos P Sgardelis
Journal:  Oecologia       Date:  2015-04-22       Impact factor: 3.225

Review 4.  Belowground biodiversity and ecosystem functioning.

Authors:  Richard D Bardgett; Wim H van der Putten
Journal:  Nature       Date:  2014-11-27       Impact factor: 49.962

5.  Soil nematode abundance and functional group composition at a global scale.

Authors:  Johan van den Hoogen; Stefan Geisen; Devin Routh; Howard Ferris; Walter Traunspurger; David A Wardle; Ron G M de Goede; Byron J Adams; Wasim Ahmad; Walter S Andriuzzi; Richard D Bardgett; Michael Bonkowski; Raquel Campos-Herrera; Juvenil E Cares; Tancredi Caruso; Larissa de Brito Caixeta; Xiaoyun Chen; Sofia R Costa; Rachel Creamer; José Mauro da Cunha Castro; Marie Dam; Djibril Djigal; Miguel Escuer; Bryan S Griffiths; Carmen Gutiérrez; Karin Hohberg; Daria Kalinkina; Paul Kardol; Alan Kergunteuil; Gerard Korthals; Valentyna Krashevska; Alexey A Kudrin; Qi Li; Wenju Liang; Matthew Magilton; Mariette Marais; José Antonio Rodríguez Martín; Elizaveta Matveeva; El Hassan Mayad; Christian Mulder; Peter Mullin; Roy Neilson; T A Duong Nguyen; Uffe N Nielsen; Hiroaki Okada; Juan Emilio Palomares Rius; Kaiwen Pan; Vlada Peneva; Loïc Pellissier; Julio Carlos Pereira da Silva; Camille Pitteloud; Thomas O Powers; Kirsten Powers; Casper W Quist; Sergio Rasmann; Sara Sánchez Moreno; Stefan Scheu; Heikki Setälä; Anna Sushchuk; Alexei V Tiunov; Jean Trap; Wim van der Putten; Mette Vestergård; Cecile Villenave; Lieven Waeyenberge; Diana H Wall; Rutger Wilschut; Daniel G Wright; Jiue-In Yang; Thomas Ward Crowther
Journal:  Nature       Date:  2019-07-24       Impact factor: 49.962

6.  Changes in belowground biodiversity during ecosystem development.

Authors:  Manuel Delgado-Baquerizo; Richard D Bardgett; Peter M Vitousek; Fernando T Maestre; Mark A Williams; David J Eldridge; Hans Lambers; Sigrid Neuhauser; Antonio Gallardo; Laura García-Velázquez; Osvaldo E Sala; Sebastián R Abades; Fernando D Alfaro; Asmeret A Berhe; Matthew A Bowker; Courtney M Currier; Nick A Cutler; Stephen C Hart; Patrick E Hayes; Zeng-Yei Hseu; Martin Kirchmair; Victor M Peña-Ramírez; Cecilia A Pérez; Sasha C Reed; Fernanda Santos; Christina Siebe; Benjamin W Sullivan; Luis Weber-Grullon; Noah Fierer
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-15       Impact factor: 11.205

7.  Nematode consumption by mite communities varies in different forest microhabitats as indicated by molecular gut content analysis.

Authors:  Kerstin Heidemann; Liliane Ruess; Stefan Scheu; Mark Maraun
Journal:  Exp Appl Acarol       Date:  2014-04-06       Impact factor: 2.132

8.  Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally.

Authors:  Kelly S Ramirez; Jonathan W Leff; Albert Barberán; Scott Thomas Bates; Jason Betley; Thomas W Crowther; Eugene F Kelly; Emily E Oldfield; E Ashley Shaw; Christopher Steenbock; Mark A Bradford; Diana H Wall; Noah Fierer
Journal:  Proc Biol Sci       Date:  2014-11-22       Impact factor: 5.349

9.  Plant species richness and ecosystem multifunctionality in global drylands.

Authors:  Fernando T Maestre; José L Quero; Nicholas J Gotelli; Adrián Escudero; Victoria Ochoa; Manuel Delgado-Baquerizo; Miguel García-Gómez; Matthew A Bowker; Santiago Soliveres; Cristina Escolar; Pablo García-Palacios; Miguel Berdugo; Enrique Valencia; Beatriz Gozalo; Antonio Gallardo; Lorgio Aguilera; Tulio Arredondo; Julio Blones; Bertrand Boeken; Donaldo Bran; Abel A Conceição; Omar Cabrera; Mohamed Chaieb; McHich Derak; David J Eldridge; Carlos I Espinosa; Adriana Florentino; Juan Gaitán; M Gabriel Gatica; Wahida Ghiloufi; Susana Gómez-González; Julio R Gutiérrez; Rosa M Hernández; Xuewen Huang; Elisabeth Huber-Sannwald; Mohammad Jankju; Maria Miriti; Jorge Monerris; Rebecca L Mau; Ernesto Morici; Kamal Naseri; Abelardo Ospina; Vicente Polo; Aníbal Prina; Eduardo Pucheta; David A Ramírez-Collantes; Roberto Romão; Matthew Tighe; Cristian Torres-Díaz; James Val; José P Veiga; Deli Wang; Eli Zaady
Journal:  Science       Date:  2012-01-13       Impact factor: 47.728

10.  The widely used small subunit 18S rDNA molecule greatly underestimates true diversity in biodiversity surveys of the meiofauna.

Authors:  Cuong Q Tang; Francesca Leasi; Ulrike Obertegger; Alexander Kieneke; Timothy G Barraclough; Diego Fontaneto
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-17       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.