Literature DB >> 21995042

Computing the shape of brain networks using graph filtration and Gromov-Hausdorff metric.

Hyekyoung Lee1, Moo K Chung, Hyejin Kang, Boong-Nyun Kim, Dong Soo Lee.   

Abstract

The difference between networks has been often assessed by the difference of global topological measures such as the clustering coefficient, degree distribution and modularity. In this paper, we introduce a new framework for measuring the network difference using the Gromov-Hausdorff (GH) distance, which is often used in shape analysis. In order to apply the GH distance, we define the shape of the brain network by piecing together the patches of locally connected nearest neighbors using the graph filtration. The shape of the network is then transformed to an algebraic form called the single linkage matrix. The single linkage matrix is subsequently used in measuring network differences using the GH distance. As an illustration, we apply the proposed framework to compare the FDG-PET based functional brain networks out of 24 attention deficit hyperactivity disorder (ADHD) children, 26 autism spectrum disorder (ASD) children and 11 pediatric control subjects.

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Year:  2011        PMID: 21995042     DOI: 10.1007/978-3-642-23629-7_37

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  16 in total

1.  Clinical Personal Connectomics Using Hybrid PET/MRI.

Authors:  Dong Soo Lee
Journal:  Nucl Med Mol Imaging       Date:  2019-01-15

2.  Persistent homological sparse network approach to detecting white matter abnormality in maltreated children: MRI and DTI multimodal study.

Authors:  Moo K Chung; Jamie L Hanson; Hyekyoung Lee; Nagesh Adluru; Andrew L Alexander; Richard J Davidson; Seth D Pollak
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

3.  Persistent Homology in Sparse Regression and Its Application to Brain Morphometry.

Authors:  Moo K Chung; Jamie L Hanson; Jieping Ye; Richard J Davidson; Seth D Pollak
Journal:  IEEE Trans Med Imaging       Date:  2015-03-24       Impact factor: 10.048

4.  Integrated multimodal network approach to PET and MRI based on multidimensional persistent homology.

Authors:  Hyekyoung Lee; Hyejin Kang; Moo K Chung; Seonhee Lim; Bung-Nyun Kim; Dong Soo Lee
Journal:  Hum Brain Mapp       Date:  2016-11-17       Impact factor: 5.038

5.  Degree-based statistic and center persistency for brain connectivity analysis.

Authors:  Kwangsun Yoo; Peter Lee; Moo K Chung; William S Sohn; Sun Ju Chung; Duk L Na; Daheen Ju; Yong Jeong
Journal:  Hum Brain Mapp       Date:  2016-09-04       Impact factor: 5.038

6.  Topological Network Analysis of Electroencephalographic Power Maps.

Authors:  Yuan Wang; Moo K Chung; Daniela Dentico; Antoine Lutz; Richard Davidson
Journal:  Connectomics Neuroimaging (2017)       Date:  2017-09-02

7.  Exact Topological Inference for Paired Brain Networks via Persistent Homology.

Authors:  Moo K Chung; Victoria Vilalta-Gil; Hyekyoung Lee; Paul J Rathouz; Benjamin B Lahey; David H Zald
Journal:  Inf Process Med Imaging       Date:  2017-05-23

8.  Connectivity in fMRI: Blind Spots and Breakthroughs.

Authors:  Victor Solo; Jean-Baptiste Poline; Martin A Lindquist; Sean L Simpson; F DuBois Bowman; Moo K Chung; Ben Cassidy
Journal:  IEEE Trans Med Imaging       Date:  2018-07       Impact factor: 10.048

9.  Topological Data Analysis of Single-Trial Electroencephalographic Signals.

Authors:  Yuan Wang; Hernando Ombao; Moo K Chung
Journal:  Ann Appl Stat       Date:  2018-09-11       Impact factor: 2.083

10.  Constructing Connectome Atlas by Graph Laplacian Learning.

Authors:  Minjeong Kim; Chenggang Yan; Defu Yang; Peipeng Liang; Daniel I Kaufer; Guorong Wu
Journal:  Neuroinformatics       Date:  2021-04
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