Literature DB >> 32712763

Constructing Connectome Atlas by Graph Laplacian Learning.

Minjeong Kim1, Chenggang Yan2, Defu Yang2,3, Peipeng Liang4, Daniel I Kaufer5, Guorong Wu6.   

Abstract

The recent development of neuroimaging technology and network theory allows us to visualize and characterize the whole-brain functional connectivity in vivo. The importance of conventional structural image atlas widely used in population-based neuroimaging studies has been well verified. Similarly, a "common" brain connectivity map (also called connectome atlas) across individuals can open a new pathway to interpreting disorder-related brain cognition and behaviors. However, the main obstacle of applying the classic image atlas construction approaches to the connectome data is that a regular data structure (such as a grid) in such methods breaks down the intrinsic geometry of the network connectivity derived from the irregular data domain (in the setting of a graph). To tackle this hurdle, we first embed the brain network into a set of graph signals in the Euclidean space via the diffusion mapping technique. Furthermore, we cast the problem of connectome atlas construction into a novel learning-based graph inference model. It can be constructed by iterating the following processes: (1) align all individual brain networks to a common space spanned by the graph spectrum bases of the latent common network, and (2) learn graph Laplacian of the common network that is in consensus with all aligned brain networks. We have evaluated our novel method for connectome atlas construction in comparison with non-learning-based counterparts. Based on experiments using network connectivity data from populations with neurodegenerative and neuropediatric disorders, our approach has demonstrated statistically meaningful improvement over existing methods.

Entities:  

Keywords:  Brain network; atlas construction; graph learning

Mesh:

Year:  2021        PMID: 32712763      PMCID: PMC7855351          DOI: 10.1007/s12021-020-09482-8

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  39 in total

1.  Functional cartography of complex metabolic networks.

Authors:  Roger Guimerà; Luís A Nunes Amaral
Journal:  Nature       Date:  2005-02-24       Impact factor: 49.962

2.  Learning-based deformable registration of MR brain images.

Authors:  Guorong Wu; Feihu Qi; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2006-09       Impact factor: 10.048

3.  Diffeomorphic demons: efficient non-parametric image registration.

Authors:  Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

4.  Complex network measures of brain connectivity: uses and interpretations.

Authors:  Mikail Rubinov; Olaf Sporns
Journal:  Neuroimage       Date:  2009-10-09       Impact factor: 6.556

5.  Parcellating an individual subject's cortical and subcortical brain structures using snowball sampling of resting-state correlations.

Authors:  Gagan S Wig; Timothy O Laumann; Alexander L Cohen; Jonathan D Power; Steven M Nelson; Matthew F Glasser; Francis M Miezin; Abraham Z Snyder; Bradley L Schlaggar; Steven E Petersen
Journal:  Cereb Cortex       Date:  2013-03-08       Impact factor: 5.357

6.  Computing the shape of brain networks using graph filtration and Gromov-Hausdorff metric.

Authors:  Hyekyoung Lee; Moo K Chung; Hyejin Kang; Boong-Nyun Kim; Dong Soo Lee
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

7.  Similarity network fusion for aggregating data types on a genomic scale.

Authors:  Bo Wang; Aziz M Mezlini; Feyyaz Demir; Marc Fiume; Zhuowen Tu; Michael Brudno; Benjamin Haibe-Kains; Anna Goldenberg
Journal:  Nat Methods       Date:  2014-01-26       Impact factor: 28.547

8.  The geometric median on Riemannian manifolds with application to robust atlas estimation.

Authors:  P Thomas Fletcher; Suresh Venkatasubramanian; Sarang Joshi
Journal:  Neuroimage       Date:  2008-11-13       Impact factor: 6.556

9.  Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain.

Authors:  B B Avants; C L Epstein; M Grossman; J C Gee
Journal:  Med Image Anal       Date:  2007-06-23       Impact factor: 8.545

10.  Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression.

Authors:  Ahmed Serag; Paul Aljabar; Gareth Ball; Serena J Counsell; James P Boardman; Mary A Rutherford; A David Edwards; Joseph V Hajnal; Daniel Rueckert
Journal:  Neuroimage       Date:  2011-10-01       Impact factor: 6.556

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.