Literature DB >> 30220953

Topological Data Analysis of Single-Trial Electroencephalographic Signals.

Yuan Wang1, Hernando Ombao2, Moo K Chung1.   

Abstract

Epilepsy is a neurological disorder that can negatively affect the visual, audial and motor functions of the human brain. Statistical analysis of neurophysiological recordings, such as electroencephalogram (EEG), facilitates the understanding and diagnosis of epileptic seizures. Standard statistical methods, however, do not account for topological features embedded in EEG signals. In the current study, we propose a persistent homology (PH) procedure to analyze single-trial EEG signals. The procedure denoises signals with a weighted Fourier series (WFS), and tests for topological difference between the denoised signals with a permutation test based on their PH features persistence landscapes (PL). Simulation studies show that the test effectively identifies topological difference and invariance between two signals. In an application to a single-trial multichannel seizure EEG dataset, our proposed PH procedure was able to identify the left temporal region to consistently show topological invariance, suggesting that the PH features of the Fourier decomposition during seizure is similar to the process before seizure. This finding is important because it could not be identified from a mere visual inspection of the EEG data and was in fact missed by earlier analyses of the same dataset.

Entities:  

Keywords:  electroencephalogram; epilepsy; persistence landscape; persistent homology; weighted Fourier series

Year:  2018        PMID: 30220953      PMCID: PMC6135261          DOI: 10.1214/17-AOAS1119

Source DB:  PubMed          Journal:  Ann Appl Stat        ISSN: 1932-6157            Impact factor:   2.083


  16 in total

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Authors:  I Fried
Journal:  J Neuropsychiatry Clin Neurosci       Date:  1997       Impact factor: 2.198

Review 2.  Statistical testing in electrophysiological studies.

Authors:  Eric Maris
Journal:  Psychophysiology       Date:  2011-12-16       Impact factor: 4.016

3.  Tracing the evolution of multi-scale functional networks in a mouse model of depression using persistent brain network homology.

Authors:  Arshi Khalid; Byung Sun Kim; Moo K Chung; Jong Chul Ye; Daejong Jeon
Journal:  Neuroimage       Date:  2014-07-24       Impact factor: 6.556

4.  Persistent Homology Analysis of Brain Artery Trees.

Authors:  Paul Bendich; J S Marron; Ezra Miller; Alex Pieloch; Sean Skwerer
Journal:  Ann Appl Stat       Date:  2016-03-25       Impact factor: 2.083

5.  Computing the shape of brain networks using graph filtration and Gromov-Hausdorff metric.

Authors:  Hyekyoung Lee; Moo K Chung; Hyejin Kang; Boong-Nyun Kim; Dong Soo Lee
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

6.  A unified kernel regression for diffusion wavelets on manifolds detects aging-related changes in the amygdala and hippocampus.

Authors:  Moo K Chung; Stacey M Schaefer; Carien M Van Reekum; Lara Peschke-Schmitz; Mattew J Sutterer; Richard J Davidson
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

7.  Seizure detection in EEG signals: a comparison of different approaches.

Authors:  Hamid R Mohseni; A Maghsoudi; Mohammad B Shamsollahi
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2006

8.  Cosine series representation of 3D curves and its application to white matter fiber bundles in diffusion tensor imaging.

Authors:  Moo K Chung; Nagesh Adluru; Jee Eun Lee; Mariana Lazar; Janet E Lainhart; Andrew L Alexander
Journal:  Stat Interface       Date:  2010       Impact factor: 0.582

9.  Anatomical origin of déjà vu and vivid 'memories' in human temporal lobe epilepsy.

Authors:  J Bancaud; F Brunet-Bourgin; P Chauvel; E Halgren
Journal:  Brain       Date:  1994-02       Impact factor: 13.501

10.  Epileptic seizures can be anticipated by non-linear analysis.

Authors:  J Martinerie; C Adam; M Le Van Quyen; M Baulac; S Clemenceau; B Renault; F J Varela
Journal:  Nat Med       Date:  1998-10       Impact factor: 53.440

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  4 in total

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Journal:  Front Physiol       Date:  2021-03-01       Impact factor: 4.566

2.  A topological data analysis-based method for gait signals with an application to the study of multiple sclerosis.

Authors:  Alexandre Bois; Brian Tervil; Albane Moreau; Aliénor Vienne-Jumeau; Damien Ricard; Laurent Oudre
Journal:  PLoS One       Date:  2022-05-13       Impact factor: 3.752

3.  Topological signal processing and inference of event-related potential response.

Authors:  Yuan Wang; Roozbeh Behroozmand; Lorelei Phillip Johnson; Leonardo Bonilha; Julius Fridriksson
Journal:  J Neurosci Methods       Date:  2021-08-21       Impact factor: 2.390

4.  Discussion of 'Event history and topological data analysis'.

Authors:  Moo K Chung; Hernando Ombao
Journal:  Biometrika       Date:  2021-11-15       Impact factor: 2.445

  4 in total

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