Literature DB >> 21956563

Experimental methods for scanning unnatural amino acid mutagenesis.

Jia Liu1, T Ashton Cropp.   

Abstract

Site-specific incorporation of unnatural amino acids into proteins in vivo relies on the genetic reassignment of nonsense or quadruplet codons. Here, we describe a general procedure for the random introduction of these codons into open reading frames resulting in protein libraries that are scanned with unnatural amino acid residues. These libraries can enable large-scale mutagenesis experiments aimed at understanding and improving protein function.

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Year:  2012        PMID: 21956563      PMCID: PMC4104607          DOI: 10.1007/978-1-61779-331-8_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  14 in total

1.  An efficient and accurate integration of mini-Mu transposons in vitro: a general methodology for functional genetic analysis and molecular biology applications.

Authors:  S Haapa; S Taira; E Heikkinen; H Savilahti
Journal:  Nucleic Acids Res       Date:  1999-07-01       Impact factor: 16.971

2.  User-friendly algorithms for estimating completeness and diversity in randomized protein-encoding libraries.

Authors:  Wayne M Patrick; Andrew E Firth; Jonathan M Blackburn
Journal:  Protein Eng       Date:  2003-06

3.  A second-generation system for unbiased reading frame selection.

Authors:  Monica L Gerth; Wayne M Patrick; Stefan Lutz
Journal:  Protein Eng Des Sel       Date:  2004-08-25       Impact factor: 1.650

4.  Site-specific PEGylation of proteins containing unnatural amino acids.

Authors:  Alexander Deiters; T Ashton Cropp; Daniel Summerer; Mridul Mukherji; Peter G Schultz
Journal:  Bioorg Med Chem Lett       Date:  2004-12-06       Impact factor: 2.823

Review 5.  An expanding genetic code.

Authors:  T Ashton Cropp; Peter G Schultz
Journal:  Trends Genet       Date:  2004-12       Impact factor: 11.639

6.  A genetically encoded photocaged amino acid.

Authors:  Ning Wu; Alexander Deiters; T Ashton Cropp; David King; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2004-11-10       Impact factor: 15.419

7.  Addition of the keto functional group to the genetic code of Escherichia coli.

Authors:  Lei Wang; Zhiwen Zhang; Ansgar Brock; Peter G Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-23       Impact factor: 11.205

8.  Probing the alpha-complementing domain of E. coli beta-galactosidase with use of an insertional pentapeptide mutagenesis strategy based on Mu in vitro DNA transposition.

Authors:  Eini Poussu; Mauno Vihinen; Lars Paulin; Harri Savilahti
Journal:  Proteins       Date:  2004-03-01

9.  Efficient incorporation of unnatural amino acids into proteins in Escherichia coli.

Authors:  Youngha Ryu; Peter G Schultz
Journal:  Nat Methods       Date:  2006-04       Impact factor: 28.547

10.  Addition of a photocrosslinking amino acid to the genetic code of Escherichiacoli.

Authors:  Jason W Chin; Andrew B Martin; David S King; Lei Wang; Peter G Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-01       Impact factor: 11.205

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  1 in total

1.  Structural plasticity of green fluorescent protein to amino acid deletions and fluorescence rescue by folding-enhancing mutations.

Authors:  Shu-su Liu; Xuan Wei; Xue Dong; Liang Xu; Jia Liu; Biao Jiang
Journal:  BMC Biochem       Date:  2015-07-25       Impact factor: 4.059

  1 in total

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