Literature DB >> 24739741

Advances in whole-embryo imaging: a quantitative transition is underway.

Periklis Pantazis1, Willy Supatto2.   

Abstract

With the advent of imaging probes and live microscopy, developmental biologists have markedly extended our understanding of the molecular and cellular details of embryonic development. To fully comprehend the complex mechanistic framework that forms the developing organism, quantitative studies with high fidelity in space and time are now required. We discuss how integrating established, newly introduced and future imaging tools with quantitative analysis will ensure that imaging can fulfil its promise to elucidate how new life begins.

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Year:  2014        PMID: 24739741     DOI: 10.1038/nrm3786

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  124 in total

1.  Long-term two-photon fluorescence imaging of mammalian embryos without compromising viability.

Authors:  J M Squirrell; D L Wokosin; J G White; B D Bavister
Journal:  Nat Biotechnol       Date:  1999-08       Impact factor: 54.908

2.  Optical sectioning deep inside live embryos by selective plane illumination microscopy.

Authors:  Jan Huisken; Jim Swoger; Filippo Del Bene; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2004-08-13       Impact factor: 47.728

Review 3.  SHG nanoprobes: advancing harmonic imaging in biology.

Authors:  William P Dempsey; Scott E Fraser; Periklis Pantazis
Journal:  Bioessays       Date:  2012-03-06       Impact factor: 4.345

4.  Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy.

Authors:  Raju Tomer; Khaled Khairy; Fernando Amat; Philipp J Keller
Journal:  Nat Methods       Date:  2012-06-03       Impact factor: 28.547

5.  Near-infrared light photocontrolled targeting, bioimaging, and chemotherapy with caged upconversion nanoparticles in vitro and in vivo.

Authors:  Yi-Hsin Chien; Yu-Lin Chou; Shu-Wen Wang; Shu-Ting Hung; Min-Chiau Liau; Yu-Jo Chao; Chia-Hao Su; Chen-Sheng Yeh
Journal:  ACS Nano       Date:  2013-09-30       Impact factor: 15.881

6.  Two-photon laser scanning fluorescence microscopy.

Authors:  W Denk; J H Strickler; W W Webb
Journal:  Science       Date:  1990-04-06       Impact factor: 47.728

7.  Deep-tissue photoacoustic tomography of a genetically encoded near-infrared fluorescent probe.

Authors:  Grigory S Filonov; Arie Krumholz; Jun Xia; Junjie Yao; Lihong V Wang; Vladislav V Verkhusha
Journal:  Angew Chem Int Ed Engl       Date:  2011-12-23       Impact factor: 15.336

8.  Spindle alignment is achieved without rotation after the first cell cycle in Drosophila embryonic neuroblasts.

Authors:  Elena Rebollo; Mónica Roldán; Cayetano Gonzalez
Journal:  Development       Date:  2009-09-17       Impact factor: 6.868

9.  Transcription factor kinetics and the emerging asymmetry in the early mammalian embryo.

Authors:  Periklis Pantazis; Tobias Bollenbach
Journal:  Cell Cycle       Date:  2012-06-01       Impact factor: 4.534

10.  Fast, high-contrast imaging of animal development with scanned light sheet-based structured-illumination microscopy.

Authors:  Philipp J Keller; Annette D Schmidt; Anthony Santella; Khaled Khairy; Zhirong Bao; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Nat Methods       Date:  2010-07-04       Impact factor: 28.547

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  33 in total

1.  Efficient processing and analysis of large-scale light-sheet microscopy data.

Authors:  Fernando Amat; Burkhard Höckendorf; Yinan Wan; William C Lemon; Katie McDole; Philipp J Keller
Journal:  Nat Protoc       Date:  2015-10-01       Impact factor: 13.491

2.  Measuring protein stability in living zebrafish embryos using fluorescence decay after photoconversion (FDAP).

Authors:  Katherine W Rogers; Alexander Blässle; Alexander F Schier; Patrick Müller
Journal:  J Vis Exp       Date:  2015-01-28       Impact factor: 1.355

Review 3.  Physics of growing biological tissues: the complex cross-talk between cell activity, growth and resistance.

Authors:  Martine Ben Amar; Pierre Nassoy; Loic LeGoff
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2019-05-06       Impact factor: 4.226

4.  Labeling cellular structures in vivo using confined primed conversion of photoconvertible fluorescent proteins.

Authors:  Manuel Alexander Mohr; Paul Argast; Periklis Pantazis
Journal:  Nat Protoc       Date:  2016-11-03       Impact factor: 13.491

5.  A Preferred Curvature-Based Continuum Mechanics Framework for Modeling Embryogenesis.

Authors:  Khaled Khairy; William Lemon; Fernando Amat; Philipp J Keller
Journal:  Biophys J       Date:  2018-01-23       Impact factor: 4.033

6.  Adaptive light-sheet microscopy for long-term, high-resolution imaging in living organisms.

Authors:  Loïc A Royer; William C Lemon; Raghav K Chhetri; Yinan Wan; Michael Coleman; Eugene W Myers; Philipp J Keller
Journal:  Nat Biotechnol       Date:  2016-10-31       Impact factor: 54.908

Review 7.  Abstracting the principles of development using imaging and modeling.

Authors:  Fengzhu Xiong; Sean G Megason
Journal:  Integr Biol (Camb)       Date:  2015-06       Impact factor: 2.192

8.  Visualization of Motor Axon Navigation and Quantification of Axon Arborization In Mouse Embryos Using Light Sheet Fluorescence Microscopy.

Authors:  Ee Shan Liau; Ya-Ping Yen; Jun-An Chen
Journal:  J Vis Exp       Date:  2018-05-11       Impact factor: 1.355

Review 9.  Quantifying Modes of 3D Cell Migration.

Authors:  Meghan K Driscoll; Gaudenz Danuser
Journal:  Trends Cell Biol       Date:  2015-10-23       Impact factor: 20.808

10.  Intravital imaging of mouse embryos.

Authors:  Qiang Huang; Malkiel A Cohen; Fernando C Alsina; Garth Devlin; Aliesha Garrett; Jennifer McKey; Patrick Havlik; Nikolai Rakhilin; Ergang Wang; Kun Xiang; Parker Mathews; Lihua Wang; Cheryl Bock; Victor Ruthig; Yi Wang; Marcos Negrete; Chi Wut Wong; Preetish K L Murthy; Shupei Zhang; Andrea R Daniel; David G Kirsch; Yubin Kang; Blanche Capel; Aravind Asokan; Debra L Silver; Rudolf Jaenisch; Xiling Shen
Journal:  Science       Date:  2020-04-10       Impact factor: 47.728

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