Literature DB >> 21930584

The chemical versatility of RNA.

David A Hiller1, Scott A Strobel.   

Abstract

The ability of RNA to both store genetic information and catalyse chemical reactions has led to the hypothesis that it predates DNA and proteins. While there is no doubt that RNA is capable of storing the genetic information of a primitive organism, only two classes of reactions-phosphoryl transfer and peptide bond formation-have been observed to be catalysed by RNA in nature. However, these naturally occurring ribozymes use a wide range of catalytic strategies that could be applied to other reactions. Furthermore, RNA can bind several cofactors that are used by protein enzymes to facilitate a wide variety of chemical processes. Despite its limited functional groups, these observations indicate RNA is a versatile molecule that could, in principle, catalyse the myriad reactions necessary to sustain life.

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Year:  2011        PMID: 21930584      PMCID: PMC3158924          DOI: 10.1098/rstb.2011.0143

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  57 in total

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Journal:  Annu Rev Biochem       Date:  1975       Impact factor: 23.643

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Journal:  Science       Date:  1993-06-18       Impact factor: 47.728

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Authors:  T A Steitz; J A Steitz
Journal:  Proc Natl Acad Sci U S A       Date:  1993-07-15       Impact factor: 11.205

Review 6.  Introns as mobile genetic elements.

Authors:  A M Lambowitz; M Belfort
Journal:  Annu Rev Biochem       Date:  1993       Impact factor: 23.643

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Authors:  D P Bartel; J W Szostak
Journal:  Science       Date:  1993-09-10       Impact factor: 47.728

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Authors:  Peter L Adams; Mary R Stahley; Anne B Kosek; Jimin Wang; Scott A Strobel
Journal:  Nature       Date:  2004-06-02       Impact factor: 49.962

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Authors:  S Booker; S Licht; J Broderick; J Stubbe
Journal:  Biochemistry       Date:  1994-10-25       Impact factor: 3.162

10.  Control of gene expression by a natural metabolite-responsive ribozyme.

Authors:  Wade C Winkler; Ali Nahvi; Adam Roth; Jennifer A Collins; Ronald R Breaker
Journal:  Nature       Date:  2004-03-18       Impact factor: 49.962

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  15 in total

1.  The chemical origins of life and its early evolution: an introduction.

Authors:  David M J Lilley; John Sutherland
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

Review 2.  The ribosome challenge to the RNA world.

Authors:  Jessica C Bowman; Nicholas V Hud; Loren Dean Williams
Journal:  J Mol Evol       Date:  2015-03-05       Impact factor: 2.395

Review 3.  Face-time with TAR: Portraits of an HIV-1 RNA with diverse modes of effector recognition relevant for drug discovery.

Authors:  Sai Shashank Chavali; Rachel Bonn-Breach; Joseph E Wedekind
Journal:  J Biol Chem       Date:  2019-05-12       Impact factor: 5.157

Review 4.  Molecular Mechanisms of Enzyme Activation by Monovalent Cations.

Authors:  David W Gohara; Enrico Di Cera
Journal:  J Biol Chem       Date:  2016-07-26       Impact factor: 5.157

5.  Isotope effect analyses provide evidence for an altered transition state for RNA 2'-O-transphosphorylation catalyzed by Zn(2+).

Authors:  Shuming Zhang; Hong Gu; Haoyuan Chen; Emily Strong; Edward W Ollie; Daniel Kellerman; Danni Liang; Masaru Miyagi; Vernon E Anderson; Joseph A Piccirilli; Darrin M York; Michael E Harris
Journal:  Chem Commun (Camb)       Date:  2016-03-25       Impact factor: 6.222

6.  Purine biosynthetic intermediate-containing ribose-phosphate polymers as evolutionary precursors to RNA.

Authors:  Harold S Bernhardt; Roger K Sandwick
Journal:  J Mol Evol       Date:  2014-09-02       Impact factor: 2.395

7.  Alternative substrate kinetics of Escherichia coli ribonuclease P: determination of relative rate constants by internal competition.

Authors:  Lindsay E Yandek; Hsuan-Chun Lin; Michael E Harris
Journal:  J Biol Chem       Date:  2013-01-28       Impact factor: 5.157

8.  Imaginary Ribozymes.

Authors:  Ronald R Breaker
Journal:  ACS Chem Biol       Date:  2020-08-03       Impact factor: 5.100

9.  Specificity and catalysis hardwired at the RNA-protein interface in a translational proofreading enzyme.

Authors:  Sadeem Ahmad; Sowndarya Muthukumar; Santosh Kumar Kuncha; Satya Brata Routh; Antony S K Yerabham; Tanweer Hussain; Venu Kamarthapu; Shobha P Kruparani; Rajan Sankaranarayanan
Journal:  Nat Commun       Date:  2015-06-26       Impact factor: 14.919

10.  The RNA world hypothesis: the worst theory of the early evolution of life (except for all the others)(a).

Authors:  Harold S Bernhardt
Journal:  Biol Direct       Date:  2012-07-13       Impact factor: 4.540

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