Literature DB >> 21919788

Adaptive decoding for brain-machine interfaces through Bayesian parameter updates.

Zheng Li1, Joseph E O'Doherty, Mikhail A Lebedev, Miguel A L Nicolelis.   

Abstract

Brain-machine interfaces (BMIs) transform the activity of neurons recorded in motor areas of the brain into movements of external actuators. Representation of movements by neuronal populations varies over time, during both voluntary limb movements and movements controlled through BMIs, due to motor learning, neuronal plasticity, and instability in recordings. To ensure accurate BMI performance over long time spans, BMI decoders must adapt to these changes. We propose the Bayesian regression self-training method for updating the parameters of an unscented Kalman filter decoder. This novel paradigm uses the decoder's output to periodically update its neuronal tuning model in a Bayesian linear regression. We use two previously known statistical formulations of Bayesian linear regression: a joint formulation, which allows fast and exact inference, and a factorized formulation, which allows the addition and temporary omission of neurons from updates but requires approximate variational inference. To evaluate these methods, we performed offline reconstructions and closed-loop experiments with rhesus monkeys implanted cortically with microwire electrodes. Offline reconstructions used data recorded in areas M1, S1, PMd, SMA, and PP of three monkeys while they controlled a cursor using a handheld joystick. The Bayesian regression self-training updates significantly improved the accuracy of offline reconstructions compared to the same decoder without updates. We performed 11 sessions of real-time, closed-loop experiments with a monkey implanted in areas M1 and S1. These sessions spanned 29 days. The monkey controlled the cursor using the decoder with and without updates. The updates maintained control accuracy and did not require information about monkey hand movements, assumptions about desired movements, or knowledge of the intended movement goals as training signals. These results indicate that Bayesian regression self-training can maintain BMI control accuracy over long periods, making clinical neuroprosthetics more viable.

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Mesh:

Year:  2011        PMID: 21919788      PMCID: PMC3335277          DOI: 10.1162/NECO_a_00207

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  33 in total

Review 1.  Brain-machine interfaces to restore motor function and probe neural circuits.

Authors:  Miguel A L Nicolelis
Journal:  Nat Rev Neurosci       Date:  2003-05       Impact factor: 34.870

2.  Cortical ensemble adaptation to represent velocity of an artificial actuator controlled by a brain-machine interface.

Authors:  Mikhail A Lebedev; Jose M Carmena; Joseph E O'Doherty; Miriam Zacksenhouse; Craig S Henriquez; Jose C Principe; Miguel A L Nicolelis
Journal:  J Neurosci       Date:  2005-05-11       Impact factor: 6.167

3.  Bayesian population decoding of motor cortical activity using a Kalman filter.

Authors:  Wei Wu; Yun Gao; Elie Bienenstock; John P Donoghue; Michael J Black
Journal:  Neural Comput       Date:  2006-01       Impact factor: 2.026

4.  Selection and parameterization of cortical neurons for neuroprosthetic control.

Authors:  Remy Wahnoun; Jiping He; Stephen I Helms Tillery
Journal:  J Neural Eng       Date:  2006-05-16       Impact factor: 5.379

5.  Neuron selection and visual training for population vector based cortical control.

Authors:  R Wahnoun; S I Helms Tillery; Jiping He
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2004

6.  Motor learning with unstable neural representations.

Authors:  Uri Rokni; Andrew G Richardson; Emilio Bizzi; H Sebastian Seung
Journal:  Neuron       Date:  2007-05-24       Impact factor: 17.173

7.  Coadaptive brain-machine interface via reinforcement learning.

Authors:  Jack DiGiovanna; Babak Mahmoudi; Jose Fortes; Jose C Principe; Justin C Sanchez
Journal:  IEEE Trans Biomed Eng       Date:  2009-01       Impact factor: 4.538

8.  Real-time decoding of nonstationary neural activity in motor cortex.

Authors:  Wei Wu; Nicholas G Hatsopoulos
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2008-06       Impact factor: 3.802

9.  Instant neural control of a movement signal.

Authors:  Mijail D Serruya; Nicholas G Hatsopoulos; Liam Paninski; Matthew R Fellows; John P Donoghue
Journal:  Nature       Date:  2002-03-14       Impact factor: 49.962

10.  Emergence of a stable cortical map for neuroprosthetic control.

Authors:  Karunesh Ganguly; Jose M Carmena
Journal:  PLoS Biol       Date:  2009-07-21       Impact factor: 8.029

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  34 in total

1.  Robust Closed-Loop Control of a Cursor in a Person with Tetraplegia using Gaussian Process Regression.

Authors:  David M Brandman; Michael C Burkhart; Jessica Kelemen; Brian Franco; Matthew T Harrison; Leigh R Hochberg
Journal:  Neural Comput       Date:  2018-09-14       Impact factor: 2.026

2.  Brain-state classification and a dual-state decoder dramatically improve the control of cursor movement through a brain-machine interface.

Authors:  Nicholas A Sachs; Ricardo Ruiz-Torres; Eric J Perreault; Lee E Miller
Journal:  J Neural Eng       Date:  2015-12-11       Impact factor: 5.379

3.  Comparing temporal aspects of visual, tactile, and microstimulation feedback for motor control.

Authors:  Jason M Godlove; Erin O Whaite; Aaron P Batista
Journal:  J Neural Eng       Date:  2014-07-16       Impact factor: 5.379

Review 4.  Physiological properties of brain-machine interface input signals.

Authors:  Marc W Slutzky; Robert D Flint
Journal:  J Neurophysiol       Date:  2017-06-14       Impact factor: 2.714

5.  Self-recalibrating classifiers for intracortical brain-computer interfaces.

Authors:  William Bishop; Cynthia C Chestek; Vikash Gilja; Paul Nuyujukian; Justin D Foster; Stephen I Ryu; Krishna V Shenoy; Byron M Yu
Journal:  J Neural Eng       Date:  2014-02-06       Impact factor: 5.379

6.  Motor cortical control of movement speed with implications for brain-machine interface control.

Authors:  Matthew D Golub; Byron M Yu; Andrew B Schwartz; Steven M Chase
Journal:  J Neurophysiol       Date:  2014-04-09       Impact factor: 2.714

7.  An adaptive decoder design based on the receding horizon optimization in BMI system.

Authors:  Hongguang Pan; Wenyu Mi; Fan Wen; Weimin Zhong
Journal:  Cogn Neurodyn       Date:  2020-01-07       Impact factor: 5.082

8.  Adaptive offset correction for intracortical brain-computer interfaces.

Authors:  Mark L Homer; Janos A Perge; Michael J Black; Matthew T Harrison; Sydney S Cash; Leigh R Hochberg
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2014-03       Impact factor: 3.802

9.  To sort or not to sort: the impact of spike-sorting on neural decoding performance.

Authors:  Sonia Todorova; Patrick Sadtler; Aaron Batista; Steven Chase; Valérie Ventura
Journal:  J Neural Eng       Date:  2014-08-01       Impact factor: 5.379

Review 10.  Sensors and decoding for intracortical brain computer interfaces.

Authors:  Mark L Homer; Arto V Nurmikko; John P Donoghue; Leigh R Hochberg
Journal:  Annu Rev Biomed Eng       Date:  2013       Impact factor: 9.590

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