Literature DB >> 30216140

Robust Closed-Loop Control of a Cursor in a Person with Tetraplegia using Gaussian Process Regression.

David M Brandman1, Michael C Burkhart2, Jessica Kelemen3, Brian Franco4, Matthew T Harrison5, Leigh R Hochberg6.   

Abstract

Intracortical brain computer interfaces can enable individuals with paralysis to control external devices through voluntarily modulated brain activity. Decoding quality has been previously shown to degrade with signal nonstationarities-specifically, the changes in the statistics of the data between training and testing data sets. This includes changes to the neural tuning profiles and baseline shifts in firing rates of recorded neurons, as well as nonphysiological noise. While progress has been made toward providing long-term user control via decoder recalibration, relatively little work has been dedicated to making the decoding algorithm more resilient to signal nonstationarities. Here, we describe how principled kernel selection with gaussian process regression can be used within a Bayesian filtering framework to mitigate the effects of commonly encountered nonstationarities. Given a supervised training set of (neural features, intention to move in a direction)-pairs, we use gaussian process regression to predict the intention given the neural data. We apply kernel embedding for each neural feature with the standard radial basis function. The multiple kernels are then summed together across each neural dimension, which allows the kernel to effectively ignore large differences that occur only in a single feature. The summed kernel is used for real-time predictions of the posterior mean and variance under a gaussian process framework. The predictions are then filtered using the discriminative Kalman filter to produce an estimate of the neural intention given the history of neural data. We refer to the multiple kernel approach combined with the discriminative Kalman filter as the MK-DKF. We found that the MK-DKF decoder was more resilient to nonstationarities frequently encountered in-real world settings yet provided similar performance to the currently used Kalman decoder. These results demonstrate a method by which neural decoding can be made more resistant to nonstationarities.

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Year:  2018        PMID: 30216140      PMCID: PMC6685768          DOI: 10.1162/neco_a_01129

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  50 in total

1.  Bayesian population decoding of motor cortical activity using a Kalman filter.

Authors:  Wei Wu; Yun Gao; Elie Bienenstock; John P Donoghue; Michael J Black
Journal:  Neural Comput       Date:  2006-01       Impact factor: 2.026

2.  Functional network reorganization during learning in a brain-computer interface paradigm.

Authors:  Beata Jarosiewicz; Steven M Chase; George W Fraser; Meel Velliste; Robert E Kass; Andrew B Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-01       Impact factor: 11.205

3.  Rapid calibration of an intracortical brain-computer interface for people with tetraplegia.

Authors:  David M Brandman; Tommy Hosman; Jad Saab; Michael C Burkhart; Benjamin E Shanahan; John G Ciancibello; Anish A Sarma; Daniel J Milstein; Carlos E Vargas-Irwin; Brian Franco; Jessica Kelemen; Christine Blabe; Brian A Murphy; Daniel R Young; Francis R Willett; Chethan Pandarinath; Sergey D Stavisky; Robert F Kirsch; Benjamin L Walter; A Bolu Ajiboye; Sydney S Cash; Emad N Eskandar; Jonathan P Miller; Jennifer A Sweet; Krishna V Shenoy; Jaimie M Henderson; Beata Jarosiewicz; Matthew T Harrison; John D Simeral; Leigh R Hochberg
Journal:  J Neural Eng       Date:  2018-04       Impact factor: 5.379

4.  Neural control of cursor trajectory and click by a human with tetraplegia 1000 days after implant of an intracortical microelectrode array.

Authors:  J D Simeral; S-P Kim; M J Black; J P Donoghue; L R Hochberg
Journal:  J Neural Eng       Date:  2011-03-24       Impact factor: 5.379

5.  Primary motor cortex tuning to intended movement kinematics in humans with tetraplegia.

Authors:  Wilson Truccolo; Gerhard M Friehs; John P Donoghue; Leigh R Hochberg
Journal:  J Neurosci       Date:  2008-01-30       Impact factor: 6.167

6.  Clinical translation of a high-performance neural prosthesis.

Authors:  Vikash Gilja; Chethan Pandarinath; Christine H Blabe; Paul Nuyujukian; John D Simeral; Anish A Sarma; Brittany L Sorice; János A Perge; Beata Jarosiewicz; Leigh R Hochberg; Krishna V Shenoy; Jaimie M Henderson
Journal:  Nat Med       Date:  2015-09-28       Impact factor: 53.440

7.  Neural control of computer cursor velocity by decoding motor cortical spiking activity in humans with tetraplegia.

Authors:  Sung-Phil Kim; John D Simeral; Leigh R Hochberg; John P Donoghue; Michael J Black
Journal:  J Neural Eng       Date:  2008-11-18       Impact factor: 5.379

8.  Intra-day signal instabilities affect decoding performance in an intracortical neural interface system.

Authors:  János A Perge; Mark L Homer; Wasim Q Malik; Sydney Cash; Emad Eskandar; Gerhard Friehs; John P Donoghue; Leigh R Hochberg
Journal:  J Neural Eng       Date:  2013-04-10       Impact factor: 5.379

9.  Robust Brain-Machine Interface Design Using Optimal Feedback Control Modeling and Adaptive Point Process Filtering.

Authors:  Maryam M Shanechi; Amy L Orsborn; Jose M Carmena
Journal:  PLoS Comput Biol       Date:  2016-04-01       Impact factor: 4.475

10.  Making brain-machine interfaces robust to future neural variability.

Authors:  David Sussillo; Sergey D Stavisky; Jonathan C Kao; Stephen I Ryu; Krishna V Shenoy
Journal:  Nat Commun       Date:  2016-12-13       Impact factor: 14.919

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  2 in total

1.  The Discriminative Kalman Filter for Bayesian Filtering with Nonlinear and Nongaussian Observation Models.

Authors:  Michael C Burkhart; David M Brandman; Brian Franco; Leigh R Hochberg; Matthew T Harrison
Journal:  Neural Comput       Date:  2020-03-18       Impact factor: 2.026

2.  Spatial-temporal aspects of continuous EEG-based neurorobotic control.

Authors:  Daniel Suma; Jianjun Meng; Bradley Jay Edelman; Bin He
Journal:  J Neural Eng       Date:  2020-11-11       Impact factor: 5.379

  2 in total

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