Literature DB >> 21890678

Effect of genetically modified poplars on soil microbial communities during the phytoremediation of waste mine tailings.

Moonsuk Hur1, Yongho Kim, Hae-Ryong Song, Jong Min Kim, Young Im Choi, Hana Yi.   

Abstract

The application of transgenic plants to clean up environmental pollution caused by the wastes of heavy metal mining is a promising method for removing metal pollutants from soils. However, the effect of using genetically modified organisms for phytoremediation is a poorly researched topic in terms of microbial community structures, despite the important role of microorganisms in the health of soil. In this study, a comparative analysis of the bacterial and archaeal communities found in the rhizosphere of genetically modified (GM) versus wild-type (WT) poplar was conducted on trees at different growth stages (i.e., the rhizospheres of 1.5-, 2.5-, and 3-year-old poplars) that were cultivated on contaminated soils together with nonplanted control soil. Based on the results of DNA pyrosequencing, poplar type and growth stages were associated with directional changes in the structure of the microbial community. The rate of change was faster in GM poplars than in WT poplars, but the microbial communities were identical in the 3-year-old poplars. This phenomenon may arise because of a higher rate and greater extent of metal accumulation in GM poplars than in naturally occurring plants, which resulted in greater changes in soil environments and hence the microbial habitat.

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Year:  2011        PMID: 21890678      PMCID: PMC3209168          DOI: 10.1128/AEM.06102-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  58 in total

1.  Use of the T-RFLP technique to assess spatial and temporal changes in the bacterial community structure within an agricultural soil planted with transgenic and non-transgenic potato plants.

Authors: 
Journal:  FEMS Microbiol Ecol       Date:  2000-06-01       Impact factor: 4.194

2.  Seasonal changes in the rhizosphere microbial communities associated with field-grown genetically modified canola (Brassica napus).

Authors:  Kari E Dunfield; James J Germida
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

Review 3.  Impact of genetically modified crops on soil- and plant-associated microbial communities.

Authors:  Kari E Dunfield; James J Germida
Journal:  J Environ Qual       Date:  2004 May-Jun       Impact factor: 2.751

Review 4.  Perspectives for genetic engineering of poplars for enhanced phytoremediation abilities.

Authors:  Rakesh Yadav; Pooja Arora; Sandeep Kumar; Ashok Chaudhury
Journal:  Ecotoxicology       Date:  2010-09-17       Impact factor: 2.823

5.  Characterization of a bacterial community in an abandoned semiarid lead-zinc mine tailing site.

Authors:  Monica O Mendez; Julia W Neilson; Raina M Maier
Journal:  Appl Environ Microbiol       Date:  2008-04-18       Impact factor: 4.792

6.  Impact of transgenic tobacco on trinitrotoluene (TNT) contaminated soil community.

Authors:  Emma R Travis; Nerissa K Hannink; Christopher J Van der Gast; Ian P Thompson; Susan J Rosser; Neil C Bruce
Journal:  Environ Sci Technol       Date:  2007-08-15       Impact factor: 9.028

7.  Elevated atmospheric CO2 affects soil microbial diversity associated with trembling aspen.

Authors:  Celine Lesaulnier; Dimitris Papamichail; Sean McCorkle; Bernard Ollivier; Steven Skiena; Safiyh Taghavi; Donald Zak; Daniel van der Lelie
Journal:  Environ Microbiol       Date:  2008-01-24       Impact factor: 5.491

8.  Microbial communities in acid mine drainage and their interaction with pyrite surface.

Authors:  Xuehui Xie; Shengmu Xiao; Jianshe Liu
Journal:  Curr Microbiol       Date:  2009-03-25       Impact factor: 2.188

9.  Earthworm biomass as additional information for risk assessment of heavy metal biomagnification: a case study for dredged sediment-derived soils and polluted floodplain soils.

Authors:  Bart Vandecasteele; Jurgen Samyn; Paul Quataert; Bart Muys; Filip M G Tack
Journal:  Environ Pollut       Date:  2004-06       Impact factor: 8.071

10.  Microbial community succession and bacterial diversity in soils during 77,000 years of ecosystem development.

Authors:  Silvana Tarlera; Kamlesh Jangid; Andrew H Ivester; William B Whitman; Mark A Williams
Journal:  FEMS Microbiol Ecol       Date:  2008-03-06       Impact factor: 4.194

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  44 in total

1.  Similarities and Contrasts in the Archaeal Community of Two Japanese Mountains: Mt. Norikura Compared to Mt. Fuji.

Authors:  Dharmesh Singh; Koichi Takahashi; Jungok Park; Jonathan M Adams
Journal:  Microb Ecol       Date:  2015-09-30       Impact factor: 4.552

2.  Efficient Low-pH Iron Removal by a Microbial Iron Oxide Mound Ecosystem at Scalp Level Run.

Authors:  Christen L Grettenberger; Alexandra R Pearce; Kyle J Bibby; Daniel S Jones; William D Burgos; Jennifer L Macalady
Journal:  Appl Environ Microbiol       Date:  2017-03-17       Impact factor: 4.792

3.  Bacterial diversity in the mountains of South-West China: climate dominates over soil parameters.

Authors:  Dharmesh Singh; Lingling Shi; Jonathan M Adams
Journal:  J Microbiol       Date:  2013-08-30       Impact factor: 3.422

4.  Generalized soil Thaumarchaeota community in weathering rock and saprolite.

Authors:  Ke Dong; Woo-Sung Kim; Binu Mani Tripathi; Jonathan Adams
Journal:  Microb Ecol       Date:  2014-11-05       Impact factor: 4.552

5.  Diversity and Distribution of Thermophilic Bacteria in Hot Springs of Pakistan.

Authors:  Arshia Amin; Iftikhar Ahmed; Nimaichand Salam; Byung-Yong Kim; Dharmesh Singh; Xiao-Yang Zhi; Min Xiao; Wen-Jun Li
Journal:  Microb Ecol       Date:  2017-01-19       Impact factor: 4.552

6.  Fungal community associated with genetically modified poplar during metal phytoremediation.

Authors:  Moonsuk Hur; Young Woon Lim; Jae Jeong Yu; Se Uk Cheon; Young Im Choi; Seok-Hwan Yoon; Sang-Cheol Park; Dong-Il Kim; Hana Yi
Journal:  J Microbiol       Date:  2012-12-30       Impact factor: 3.422

7.  Assessment of microbial diversity bias associated with soil heterogeneity and sequencing resolution in pyrosequencing analyses.

Authors:  Sokhee P Jung; Hojeong Kang
Journal:  J Microbiol       Date:  2014-05-13       Impact factor: 3.422

8.  Distinct patterns of marine bacterial communities in the South and North Pacific Oceans.

Authors:  Sung-Suk Suh; Mirye Park; Jinik Hwang; Sukchan Lee; Youngjae Chung; Taek-Kyun Lee
Journal:  J Microbiol       Date:  2014-10-01       Impact factor: 3.422

9.  Performance and bacterial communities of successive alkalinity-producing systems (SAPSs) in passive treatment processes treating mine drainages differing in acidity and metal levels.

Authors:  Sokhee Philemon Jung; Youngwook Cheong; Giljae Yim; Sangwoo Ji; Hojeong Kang
Journal:  Environ Sci Pollut Res Int       Date:  2013-11-27       Impact factor: 4.223

10.  Rhizospheric effects on the microbial community of e-waste-contaminated soils using phospholipid fatty acid and isoprenoid glycerol dialkyl glycerol tetraether analyses.

Authors:  Mengke Song; Zhineng Cheng; Chunling Luo; Longfei Jiang; Dayi Zhang; Hua Yin; Gan Zhang
Journal:  Environ Sci Pollut Res Int       Date:  2018-01-26       Impact factor: 4.223

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