| Literature DB >> 21867533 |
Tawatchai Pongpruttipan1, Tanawan Kummalue, Anan Bedavanija, Archrob Khuhapinant, Koichi Ohshima, Fumiko Arakawa, Daisuke Niino, Sanya Sukpanichnant.
Abstract
BACKGROUND: Extranodal NK/T-cell lymphoma, nasal type (ENKTL) is not common worldwide, but it is the most common T- and NK-cell lymphomas in many Asian countries. Immunophenotypic profiles were studied based on limited series. The authors, therefore, studied on ENKTL according to characterize immunophenotypic profiles as well as the distribution of EBV subtype and LMP-1 gene deletion.Entities:
Mesh:
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Year: 2011 PMID: 21867533 PMCID: PMC3170575 DOI: 10.1186/1746-1596-6-79
Source DB: PubMed Journal: Diagn Pathol ISSN: 1746-1596 Impact factor: 2.644
List of PCR primers used for EBV subtyping and detection of LMP1 gene deletion
| Type of Primer | DNA sequence | Product size | ||
|---|---|---|---|---|
| EBNA2 | EBV type A | 2A-5' | 5'-AACTTCAACCCACACCATCA-3' | 116 bp |
| EBV type B | 2A-3' | 5'-TTCTGGACTATCTGGATCAT-3' | 120 bp | |
| EBV LMP-1 | wild-type | 1-A | 5'-CGACTCTGCTGGAAATGATGGAGGC-3' | 210 bp |
| deletion-type | 1-B | 5'-TGAACTGGGCCGTGGGGGTCGTCAT-3' | 180 bp | |
| β-actin (semi-nested PCR) | 1st forward | SFW | 5'-CAAGAGATGGCCACGGCTGCT-3' | |
| 2nd forward | S4FW | 5'-GAGGCACTCTTCCAGCCTTCC-3' | 148 bp | |
| reverse | A5RV | 5'-TCGTGGATGCCACAGGACTCC-3' | ||
EBNA2, Epstein-Barr virus nuclear antigen 2 gene; LMP1, latent membrane protein 1 gene
Clinical information, morphology, immunophenotype, EBER in situ hybridization, and TCR gene rearrangement of extranodal NK/T-cell lymphoma, nasal type of head and neck region*
| No. | Age/Sex | Site (s) of involvement | Symptom (s) and its duration | Basic morphology | CD3 | CD5 | CD7 | CD4 | CD8 | βF1 | CD56 | TIA1 | GB | PF | CD45 | CD30 | EBER | TCR gene | Clinical course |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 74/M | Nasal cavity | Rhinorrhea, 1 year | large (A+, N+) | + | - | - | - | - | - | + | + | + | + | + | + | + | I | D, 3 mos |
| 2 | 40/M | Nasal cavity | Nasal obstruction, 3 mos | medium (A+, N+) | p+ | - | - | - | - | - | - | + | p+ | p+ | - | + | + | I | D, 33 mos |
| 3 | 31/M | Nasal cavity | Nasal obstruction, 1 mo | large (A+, N+) | p+ | - | - | - | - | - | + | + | + | + | + | + | + | - | D, 37 mos |
| 4 | 37/M | Nasal cavity | Orbital cellulitis, and fever, 2 mos | medium (A-, N+) | p+ | - | - | - | - | - | p- | + | p+ | + | NA | + | + | - | D, 3 mos |
| 5 | 41/F | Nasal cavity | Nasal obstruction, 1 mo | small to medium (A+, N+) | + | - | NA | - | - | - | + | + | p+ | + | + | NA | + | - | D, 3 mos |
| 6 | 49/F | Nasal cavity | Nasal obstruction, 2 mos | medium to large (A-, N+) | + | - | + | - | - | - | + | + | + | + | + | p+ | + | - | A, 60 mos |
| 7 | 43/F | Nasal cavity | Nasal obstruction, 2 mos | medium to large (A+, N+) | p+ | - | - | p+ | - | - | + | + | + | + | - | p+ | + | - | D, 8 mos |
| 8 | 32/M | Nasal cavity | Nasal obstruction, 5 mos | medium to large (A-, N+) | + | - | p- | - | - | - | + | + | p+ | p+ | NA | - | + | - | D, 3 mos |
| 9 | 33/M | Nasal cavity | Rhinorrhea, 1 mo | medium (A+, N+) | + | - | + | - | - | - | + | + | p- | p- | p+ | + | + | - | D, 4 mos |
| 10 | 38/M | Nasal cavity | Nasal obstruction with epistaxis, 2 yrs | medium (A+, N+) | + | - | - | - | - | - | p+ | + | + | + | + | + | + | I | D, 7 mos |
| 11 | 48/F | Nasal and oral cavities | Nasal obstruction, 1 mos | medium to large (A+, N+) | + | p+ | NA | - | - | - | p+ | + | p+ | p+ | NA | - | + | - | D, 3 mos |
| 12 | 36/M | Nasal cavity and nasopharynx | Epistaxis with fever, 1 mo | small to medium (A+, N+) | + | - | + | - | - | - | + | + | p+ | p- | p+ | - | + | - | D, 1 mos |
| 13 | 26/F | Nasal cavity and nasopharynx | Rhinorrhea, 2 mos | medium (A+, N+) | + | p+ | + | - | - | - | + | + | + | + | NA | - | + | - | D, 4 mos |
| 14 | 42/M | Nasal cavity and nasopharynx | Epistaxis (HIV+), 2 mos | medium to large (A-, N+) | + | - | - | p+ | - | - | + | + | + | + | p+ | p+ | + | - | D, 18 mos |
| 15 | 41/M | Nasopharynx | Dysphagia, 3 mos | medium (A+, N-) | + | - | - | - | - | - | p+ | + | + | + | + | + | + | - | D, 11 mos |
| 16 | 44/M | Nasopharynx | Rhinorrhea with epistaxis, 6 mos | medium to large (A+, N+) | - | - | - | - | - | - | - | + | p+ | - | - | + | + | - | D, 2 mos |
| 17 | 42/M | Nasopharynx | Nasal obstruction, 1 wk | medium to large (A+, N+) | + | - | + | - | - | - | + | + | + | + | p+ | + | + | I | D, 5 mos |
| 18 | 57/F | Oral cavity | Palatal mass, 2 mos | large (A+, N+) | + | - | - | - | - | - | + | + | + | + | p+ | - | + | - | D, 4 mos |
| 19 | 38/M | Oral cavity | Chronic oral ulcer, 3 mos | medium to large (A-, N+) | + | - | - | - | - | - | - | + | + | p+ | + | p+ | + | - | D, 3 mos |
| 20 | 73/M | Base of tongue and larynx | Dysphagia, 2 mos | medium to large (A+, N+) | p+ | - | NA | - | - | - | + | + | + | + | p+ | NA | + | - | D, 6 mos |
| 21 | 66/M | Periorbital soft tissue | Orbital cellulitis, 2 wks | medium to large (A+, N+) | - | - | p+ | - | - | - | + | + | + | + | p+ | + | + | - | D, 3 mos |
| 22 | 56/M | Periorbital soft tissue | Blurred vision and headache, 2 mos | medium to large (A+, N+) | + | - | - | p+ | - | - | + | + | p+ | p+ | + | p+ | + | - | D, 10 mos |
* Please see the abbreviations below
For "basic morphology": Large: predominantly (>75%) large cells; Medium to large: mixture of medium-sized to large cells (≥25% each); Medium: predominantly (>75%) medium-sized cells; Small to medium: mixture of small to medium-sized cells (≥25% each); A+: presence of angioinvasion; A-: absence of angioinvasion; N+: presence of tissue necrosis; N-: absence of tissue necrosis
For immunophenotype: GB: granzyme B; PF: perforin; + (mostly positive): positive on lymphoma cells >50%; p+ (partially positive): 10-50% positive; p- (probably negative): <10% staining; - (negative): clearly negative; NA: not available
For TCR gene (PCR -based TCR gene rearrangement analysis); - (negative): no clonal band on polyacrylamide gel electrophoresis and no dominant peak on fluorescence capillary electrophoresis; I: inadequate DNA quality for PCR
For clinical course: A: alive; D: death
Summary of basic clinico-pathological features of extranodal NK/T-cell lymphoma, nasal type of head and neck region
| Frequency | % | |
|---|---|---|
| - Range: 15-74 years | ||
| - Median: 42 years | ||
| - Mean: 45 years (SD 13) | ||
| - Male | 23 | 74 |
| - Female | 8 | 26 |
| - M/F ratio: 2.9 | ||
| Nasal obstruction | 15 | 48 |
| Rhinorrhea | 4 | 13 |
| Epistaxis | 4 | 13 |
| Fever | 3 | 10 |
| Dysphagia | 3 | 10 |
| Orbital swelling and pain | 2 | 7 |
| Blurred vision and headache | 1 | 3 |
| Epiphora | 1 | 3 |
| Chronic oral ulcer | 1 | 3 |
| Palatal mass | 1 | 3 |
| - Predominantly small | 0 | 0 |
| - Mixed small and medium-sized | 2 | 9 |
| - Predominantly medium-sized | 6 | 27 |
| - Mixed medium-sized and large | 11 | 50 |
| - Predominantly large | 3 | 17 |
| - Anaplastic | 0 | 0 |
| - Present | 15 | 68 |
| - Not identified | 7 | 32 |
| - Present | 21 | 95 |
| - Not identified | 1 | 5 |
* Some cases have more than one major presenting symptom
Summary of immunohistochemical results of the 22 cases of extranodal NK/T-cell lymphoma, nasal type
| Marker | Total cases | Mostly positive | Partially positive | Overall positivity | Probably negative | Clearly negative | Overall negativity |
|---|---|---|---|---|---|---|---|
| 15 (68%) | 5 (23%) | 0 | 2 (9%) | ||||
| 0 | 0 | 0 | 22 (100%) | ||||
| 0 | 2 (9%) | 0 | 20 (91%) | ||||
| 5 (26%) | 1 (5%) | 1 (5%) | 12 (63%) | ||||
| 0 | 3 (14%) | 0 | 19 (86%) | ||||
| 0 | 0 | 0 | 22 (100%) | ||||
| 0 | 0 | 0 | 22 (100%) | ||||
| 15 (68%) | 3 (14%) | 1 (5%) | 3 (14%) | ||||
| 0 | 0 | 0 | 21 (100%) | ||||
| 22 (100%) | 0 | 0 | 0 | ||||
| 13 (59%) | 8 (36%) | 1 (5%) | 0 | ||||
| 14 (64%) | 5 (23%) | 2 (9%) | 1 (5%) | ||||
| 8 (44%) | 7 (39%) | 0 | 3 (17%) | ||||
| 20 (91%) | 2 (9%) | 0 | 0 | ||||
| 10 (50%) | 5 (25%) | 0 | 5 (25%) | ||||
| 0 | 0 | 0 | 18 (100%) | ||||
| 1 (5%) | 4 (20%) | 3 (15%) | 12 (60%) | ||||
| 1 (7%) | 4 (27%) | 0 | 10 (67%) |
Mostly positive = definitely positive on lymphoma cells >50%
Partially positive = 10-50% positive staining
Overall positive = sum of mostly and partially positive results
Probably negative = <10% staining on presumptive lymphoma cells
Clearly negative = clearly negative
Overall negative = sum of probably negative and clearly negative results