Literature DB >> 21839746

Ultrasonication-dependent acceleration of amyloid fibril formation.

Masatomo So1, Hisashi Yagi, Kazumasa Sakurai, Hirotsugu Ogi, Hironobu Naiki, Yuji Goto.   

Abstract

Amyloid fibrils, similar to crystals, form through nucleation and growth. Because of the high free-energy barrier of nucleation, the spontaneous formation of amyloid fibrils occurs only after a long lag phase. Ultrasonication is useful for inducing amyloid nucleation and thus for forming fibrils, while the use of a microplate reader with thioflavin T fluorescence is suitable for detecting fibrils in many samples simultaneously. Combining the use of ultrasonication and microplate reader, we propose an efficient approach to studying the potential of proteins to form amyloid fibrils. With β(2)-microglobulin, an amyloidogenic protein responsible for dialysis-related amyloidosis, fibrils formed within a few minutes at pH 2.5. Even under neutral pH conditions, fibrils formed after a lag time of 1.5 h. The results propose that fibril formation is a physical reaction that is largely limited by the high free-energy barrier, which can be effectively reduced by ultrasonication. This approach will be useful for developing a high-throughput assay of the amyloidogenicity of proteins.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21839746     DOI: 10.1016/j.jmb.2011.07.069

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  21 in total

1.  An imaging and systems modeling approach to fibril breakage enables prediction of amyloid behavior.

Authors:  Wei-Feng Xue; Sheena E Radford
Journal:  Biophys J       Date:  2013-12-17       Impact factor: 4.033

2.  Heat of supersaturation-limited amyloid burst directly monitored by isothermal titration calorimetry.

Authors:  Tatsuya Ikenoue; Young-Ho Lee; József Kardos; Hisashi Yagi; Takahisa Ikegami; Hironobu Naiki; Yuji Goto
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-21       Impact factor: 11.205

3.  Supersaturation-limited amyloid fibrillation of insulin revealed by ultrasonication.

Authors:  Hiroya Muta; Young-Ho Lee; József Kardos; Yuxi Lin; Hisashi Yagi; Yuji Goto
Journal:  J Biol Chem       Date:  2014-05-20       Impact factor: 5.157

4.  A residue-specific shift in stability and amyloidogenicity of antibody variable domains.

Authors:  Cardine N Nokwe; Martin Zacharias; Hisashi Yagi; Manuel Hora; Bernd Reif; Yuji Goto; Johannes Buchner
Journal:  J Biol Chem       Date:  2014-08-05       Impact factor: 5.157

Review 5.  Formation and properties of amyloid fibrils of prion protein.

Authors:  Kei-Ichi Yamaguchi; Kazuo Kuwata
Journal:  Biophys Rev       Date:  2017-12-04

6.  Small liposomes accelerate the fibrillation of amyloid β (1-40).

Authors:  Mayu S Terakawa; Hisashi Yagi; Masayuki Adachi; Young-Ho Lee; Yuji Goto
Journal:  J Biol Chem       Date:  2014-11-18       Impact factor: 5.157

Review 7.  Salt-induced formations of partially folded intermediates and amyloid fibrils suggests a common underlying mechanism.

Authors:  Yuji Goto; Masayuki Adachi; Hiroya Muta; Masatomo So
Journal:  Biophys Rev       Date:  2017-12-18

8.  High-throughput analysis of ultrasonication-forced amyloid fibrillation reveals the mechanism underlying the large fluctuation in the lag time.

Authors:  Ayaka Umemoto; Hisashi Yagi; Masatomo So; Yuji Goto
Journal:  J Biol Chem       Date:  2014-08-12       Impact factor: 5.157

9.  Distinguishing crystal-like amyloid fibrils and glass-like amorphous aggregates from their kinetics of formation.

Authors:  Yuichi Yoshimura; Yuxi Lin; Hisashi Yagi; Young-Ho Lee; Hiroki Kitayama; Kazumasa Sakurai; Masatomo So; Hirotsugu Ogi; Hironobu Naiki; Yuji Goto
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-20       Impact factor: 11.205

10.  Benzalkonium chloride accelerates the formation of the amyloid fibrils of corneal dystrophy-associated peptides.

Authors:  Yusuke Kato; Hisashi Yagi; Yuichi Kaji; Tetsuro Oshika; Yuji Goto
Journal:  J Biol Chem       Date:  2013-07-16       Impact factor: 5.157

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