Literature DB >> 24359753

An imaging and systems modeling approach to fibril breakage enables prediction of amyloid behavior.

Wei-Feng Xue1, Sheena E Radford2.   

Abstract

Delineating the nanoscale properties and the dynamic assembly and disassembly behaviors of amyloid fibrils is key for technological applications that use the material properties of amyloid fibrils, as well as for developing treatments of amyloid-associated disease. However, quantitative mechanistic understanding of the complex processes involving these heterogeneous supramolecular systems presents challenges that have yet to be resolved. Here, we develop an approach that is capable of resolving the time dependence of fibril particle concentration, length distribution, and length and position dependence of fibril fragmentation rates using a generic mathematical framework combined with experimental data derived from atomic force microscopy analysis of fibril length distributions. By application to amyloid assembly of β2-microglobulin in vitro under constant mechanical stirring, we present a full description of the fibril fragmentation and growth behavior, and demonstrate the predictive power of the approach in terms of the samples' fibril dimensions, fibril load, and their efficiency to seed the growth of new amyloid fibrils. The approach developed offers opportunities to determine, quantify, and predict the course and the consequences of amyloid assembly.
Copyright © 2013 The Authors. Published by Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 24359753      PMCID: PMC3882454          DOI: 10.1016/j.bpj.2013.10.034

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  50 in total

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Journal:  Science       Date:  2009-12-11       Impact factor: 47.728

2.  Systematic analysis of nucleation-dependent polymerization reveals new insights into the mechanism of amyloid self-assembly.

Authors:  Wei-Feng Xue; Steve W Homans; Sheena E Radford
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-25       Impact factor: 11.205

3.  Amyloid seeds formed by cellular uptake, concentration, and aggregation of the amyloid-beta peptide.

Authors:  Xiaoyan Hu; Scott L Crick; Guojun Bu; Carl Frieden; Rohit V Pappu; Jin-Moo Lee
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4.  Cytoplasmic penetration and persistent infection of mammalian cells by polyglutamine aggregates.

Authors:  Pei-Hsien Ren; Jane E Lauckner; Ioulia Kachirskaia; John E Heuser; Ronald Melki; Ron R Kopito
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5.  Functional amyloids as natural storage of peptide hormones in pituitary secretory granules.

Authors:  Samir K Maji; Marilyn H Perrin; Michael R Sawaya; Sebastian Jessberger; Krishna Vadodaria; Robert A Rissman; Praful S Singru; K Peter R Nilsson; Rozalyn Simon; David Schubert; David Eisenberg; Jean Rivier; Paul Sawchenko; Wylie Vale; Roland Riek
Journal:  Science       Date:  2009-06-18       Impact factor: 47.728

6.  Soluble fibrillar oligomer levels are elevated in Alzheimer's disease brain and correlate with cognitive dysfunction.

Authors:  Jennifer L Tomic; Anna Pensalfini; Elizabeth Head; Charles G Glabe
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7.  Amyloid fibril length distribution quantified by atomic force microscopy single-particle image analysis.

Authors:  Wei-Feng Xue; Steve W Homans; Sheena E Radford
Journal:  Protein Eng Des Sel       Date:  2009-07-06       Impact factor: 1.650

8.  Globular tetramers of beta(2)-microglobulin assemble into elaborate amyloid fibrils.

Authors:  Helen E White; Julie L Hodgkinson; Thomas R Jahn; Sara Cohen-Krausz; Walraj S Gosal; Shirley Müller; Elena V Orlova; Sheena E Radford; Helen R Saibil
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9.  Fibril fragmentation enhances amyloid cytotoxicity.

Authors:  Wei-Feng Xue; Andrew L Hellewell; Walraj S Gosal; Steve W Homans; Eric W Hewitt; Sheena E Radford
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10.  The number and transmission of [PSI] prion seeds (Propagons) in the yeast Saccharomyces cerevisiae.

Authors:  Lee J Byrne; Diana J Cole; Brian S Cox; Martin S Ridout; Byron J T Morgan; Mick F Tuite
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  21 in total

1.  Information content in data sets for a nucleated-polymerization model.

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2.  Nanomechanics and intermolecular forces of amyloid revealed by four-dimensional electron microscopy.

Authors:  Anthony W P Fitzpatrick; Giovanni M Vanacore; Ahmed H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-02       Impact factor: 11.205

3.  The role of annealing and fragmentation in human tau aggregation dynamics.

Authors:  Carol J Huseby; Ralf Bundschuh; Jeff Kuret
Journal:  J Biol Chem       Date:  2019-02-11       Impact factor: 5.157

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Journal:  J Biol Chem       Date:  2020-01-31       Impact factor: 5.157

5.  A Free Energy Barrier Caused by the Refolding of an Oligomeric Intermediate Controls the Lag Time of Amyloid Formation by hIAPP.

Authors:  Arnaldo L Serrano; Justin P Lomont; Ling-Hsien Tu; Daniel P Raleigh; Martin T Zanni
Journal:  J Am Chem Soc       Date:  2017-11-07       Impact factor: 15.419

6.  Polymer-Peptide Conjugates Convert Amyloid into Protein Nanobundles through Fragmentation and Lateral Association.

Authors:  John W Smith; Xing Jiang; Hyosung An; Alexander M Barclay; Giuseppe Licari; Emad Tajkhorshid; Edwin G Moore; Chad M Rienstra; Jeffrey S Moore; Qian Chen
Journal:  ACS Appl Nano Mater       Date:  2019-09-10

7.  Measurement of Tau Filament Fragmentation Provides Insights into Prion-like Spreading.

Authors:  Franziska Kundel; Liu Hong; Benjamin Falcon; William A McEwan; Thomas C T Michaels; Georg Meisl; Noemi Esteras; Andrey Y Abramov; Tuomas J P Knowles; Michel Goedert; David Klenerman
Journal:  ACS Chem Neurosci       Date:  2018-04-08       Impact factor: 4.418

Review 8.  Self-assembling peptide and protein amyloids: from structure to tailored function in nanotechnology.

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9.  Analysis of Toxic Amyloid Fibril Interactions at Natively Derived Membranes by Ellipsometry.

Authors:  Rachel A S Smith; Aleksey Nabok; Ben J F Blakeman; Wei-Feng Xue; Benjamin Abell; David P Smith
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10.  Solution conditions determine the relative importance of nucleation and growth processes in α-synuclein aggregation.

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