Literature DB >> 21810179

Chromatin remodelling in mammalian cells by ISWI-type complexes--where, when and why?

Fabian Erdel1, Karsten Rippe.   

Abstract

The specific location of nucleosomes on DNA has important inhibitory or activating roles in the regulation of DNA-dependent processes as it affects the DNA accessibility. Nucleosome positions depend on the ATP-coupled activity of chromatin-remodelling complexes that translocate nucleosomes or evict them from the DNA. The mammalian cell harbors numerous different remodelling complexes that possess distinct activities. These can translate a variety of signals into certain patterns of nucleosome positions with specific functions. Although chromatin remodellers have been extensively studied in vitro, much less is known about how they operate in their cellular environment. Here, we review the cellular activities of the mammalian imitation switch proteins and discuss mechanisms by which they are targeted to sites where their activity is needed.
© 2011 The Authors Journal compilation © 2011 FEBS.

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Year:  2011        PMID: 21810179     DOI: 10.1111/j.1742-4658.2011.08282.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  42 in total

Review 1.  Mechanisms for ATP-dependent chromatin remodelling: the means to the end.

Authors:  Andrew Flaus; Tom Owen-Hughes
Journal:  FEBS J       Date:  2011-09-08       Impact factor: 5.542

Review 2.  ISWI chromatin remodeling: one primary actor or a coordinated effort?

Authors:  Blaine Bartholomew
Journal:  Curr Opin Struct Biol       Date:  2014-02-19       Impact factor: 6.809

3.  Changing chromatin fiber conformation by nucleosome repositioning.

Authors:  Oliver Müller; Nick Kepper; Robert Schöpflin; Ramona Ettig; Karsten Rippe; Gero Wedemann
Journal:  Biophys J       Date:  2014-11-04       Impact factor: 4.033

4.  Expansion of the ISWI chromatin remodeler family with new active complexes.

Authors:  Mariano Oppikofer; Tianyi Bai; Yutian Gan; Benjamin Haley; Peter Liu; Wendy Sandoval; Claudio Ciferri; Andrea G Cochran
Journal:  EMBO Rep       Date:  2017-08-11       Impact factor: 8.807

5.  Remodelers tap into nucleosome plasticity.

Authors:  Hari R Singh; Magdalena Murawska; Andreas G Ladurner
Journal:  Nat Struct Mol Biol       Date:  2017-04-06       Impact factor: 15.369

6.  ISWI contributes to ArsI insulator function in development of the sea urchin.

Authors:  Mamiko Yajima; William G Fairbrother; Gary M Wessel
Journal:  Development       Date:  2012-10       Impact factor: 6.868

Review 7.  Genetic syndromes caused by mutations in epigenetic genes.

Authors:  María Berdasco; Manel Esteller
Journal:  Hum Genet       Date:  2013-01-31       Impact factor: 4.132

8.  The ISWI ATPase Smarca5 (Snf2h) Is Required for Proliferation and Differentiation of Hematopoietic Stem and Progenitor Cells.

Authors:  Juraj Kokavec; Tomas Zikmund; Filipp Savvulidi; Vojtech Kulvait; Winfried Edelmann; Arthur I Skoultchi; Tomas Stopka
Journal:  Stem Cells       Date:  2017-04-15       Impact factor: 6.277

Review 9.  Chromatin remodelers: We are the drivers!!

Authors:  Monica Tyagi; Nasir Imam; Kirtika Verma; Ashok K Patel
Journal:  Nucleus       Date:  2016-07-18       Impact factor: 4.197

10.  SIRT6 recruits SNF2H to DNA break sites, preventing genomic instability through chromatin remodeling.

Authors:  Debra Toiber; Fabian Erdel; Karim Bouazoune; Dafne M Silberman; Lei Zhong; Peter Mulligan; Carlos Sebastian; Claudia Cosentino; Barbara Martinez-Pastor; Sofia Giacosa; Agustina D'Urso; Anders M Näär; Robert Kingston; Karsten Rippe; Raul Mostoslavsky
Journal:  Mol Cell       Date:  2013-08-01       Impact factor: 17.970

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