Literature DB >> 21801107

Gene expression signatures of radiation exposure in peripheral white blood cells of smokers and non-smokers.

Sunirmal Paul1, Sally A Amundson.   

Abstract

PURPOSE: The issue of potential confounding factors is critical to the development of any approach to radiation biodosimetry, and has not been fully addressed for gene expression-based approaches.
MATERIALS AND METHODS: As a step in this direction, we have investigated the effect of smoking on the global radiation gene expression response in ex vivo-irradiated peripheral blood cells using microarray analysis. We also evaluated the ability of gene expression signatures to predict the radiation exposure level of ex vivo-exposed samples from smokers and non-smokers of both genders.
RESULTS: We identified eight genes with a radiation response that was significantly affected by smoking status, and confirmed an effect of smoking on the radiation response of the four and a half LIM domains 2 (FHL2) gene using quantitative real-time polymerase chain reaction. The performance of our previously defined 74-gene signature in predicting the radiation dose to samples in this study was unaffected by differences in gender or smoking status, however, giving 98% correct prediction of dose category. This is the same accuracy as that found in the original study from which the signature was derived, using different donors.
CONCLUSION: The results support the development of peripheral blood gene expression as a viable strategy for radiation biodosimetry.

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Year:  2011        PMID: 21801107      PMCID: PMC3580190          DOI: 10.3109/09553002.2011.568574

Source DB:  PubMed          Journal:  Int J Radiat Biol        ISSN: 0955-3002            Impact factor:   2.694


  47 in total

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8.  Early gene expression in human lymphocytes after gamma-irradiation-a genetic pattern with potential for biodosimetry.

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1.  Developing Human Radiation Biodosimetry Models: Testing Cross-Species Conversion Approaches Using an Ex Vivo Model System.

Authors:  Jin G Park; Sunirmal Paul; Natalia Briones; Jia Zeng; Kristin Gillis; Garrick Wallstrom; Joshua LaBaer; Sally A Amundson
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2.  Gene expression as a biomarker for human radiation exposure.

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4.  Widespread decreased expression of immune function genes in human peripheral blood following radiation exposure.

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Journal:  Radiat Res       Date:  2013-10-29       Impact factor: 2.841

5.  Radiation-induced alternative transcription and splicing events and their applicability to practical biodosimetry.

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6.  Generation of a Transcriptional Radiation Exposure Signature in Human Blood Using Long-Read Nanopore Sequencing.

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7.  Gene Expression in Parp1 Deficient Mice Exposed to a Median Lethal Dose of Gamma Rays.

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8.  Methylation of Promoters of Apoptosis-Related Genes in Blood Lymphocytes of Workers Exposed to Occupational External Irradiation.

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Journal:  PLoS One       Date:  2012-11-07       Impact factor: 3.240

10.  Dose and Dose-Rate Effects in a Mouse Model of Internal Exposure to 137Cs. Part 1: Global Transcriptomic Responses in Blood.

Authors:  Shanaz A Ghandhi; Chao Sima; Waylon M Weber; Dunstana R Melo; Nils Rudqvist; Shad R Morton; Helen C Turner; Sally A Amundson
Journal:  Radiat Res       Date:  2020-11-01       Impact factor: 2.841

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