Literature DB >> 21767498

Osteogenesis imperfecta model peptides: incorporation of residues replacing Gly within a triple helix achieved by renucleation and local flexibility.

Jianxi Xiao1, Balaraman Madhan, Yingjie Li, Barbara Brodsky, Jean Baum.   

Abstract

Missense mutations, which replace one Gly with a larger residue in the repeating sequence of the type I collagen triple helix, lead to the hereditary bone disorder osteogenesis imperfecta (OI). Previous studies suggest that these mutations may interfere with triple-helix folding. NMR was used to investigate triple-helix formation in a series of model peptides where the residue replacing Gly, as well as the local sequence environment, was varied. NMR measurement of translational diffusion coefficients allowed the identification of partially folded species. When Gly was replaced by Ala, the Ala residue was incorporated into a fully folded triple helix, whereas replacement of Gly by Ser or Arg resulted in the presence of some partially folded species, suggesting a folding barrier. Increasing the triple-helix stability of the sequence N-terminal to a Gly-to-Ser replacement allowed complete triple-helix folding, whereas with the substitution of Arg, with its large side chain, the peptide achieved full folding only after flexible residues were introduced N-terminal to the mutation site. These studies shed light on the factors important for accommodation of Gly mutations within the triple helix and may relate to the varying severity of OI.
Copyright © 2011 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21767498      PMCID: PMC3136760          DOI: 10.1016/j.bpj.2011.06.017

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  49 in total

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Authors:  A COURTS
Journal:  Biochem J       Date:  1960-02       Impact factor: 3.857

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Review 3.  Triple-helical peptides: an approach to collagen conformation, stability, and self-association.

Authors:  Barbara Brodsky; Geetha Thiagarajan; Balaraman Madhan; Karunakar Kar
Journal:  Biopolymers       Date:  2008-05       Impact factor: 2.505

Review 4.  The zipper-like folding of collagen triple helices and the effects of mutations that disrupt the zipper.

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Journal:  Annu Rev Biophys Biophys Chem       Date:  1991

5.  Crystal and molecular structure of a collagen-like peptide at 1.9 A resolution.

Authors:  J Bella; M Eaton; B Brodsky; H M Berman
Journal:  Science       Date:  1994-10-07       Impact factor: 47.728

6.  Local conformation and dynamics of isoleucine in the collagenase cleavage site provide a recognition signal for matrix metalloproteinases.

Authors:  Jianxi Xiao; Rayna M Addabbo; Janelle L Lauer; Gregg B Fields; Jean Baum
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7.  Two-dimensional NMR assignments and conformation of (Pro-Hyp-Gly)10 and a designed collagen triple-helical peptide.

Authors:  M H Li; P Fan; B Brodsky; J Baum
Journal:  Biochemistry       Date:  1993-07-27       Impact factor: 3.162

8.  Structural insights from (15)N relaxation data for an anisotropic collagen peptide.

Authors:  Jianxi Xiao; Jean Baum
Journal:  J Am Chem Soc       Date:  2009-12-30       Impact factor: 15.419

9.  NMR monitoring of chain-specific stability in heterotrimeric collagen peptides.

Authors:  Balaraman Madhan; Jianxi Xiao; Geetha Thiagarajan; Jean Baum; Barbara Brodsky
Journal:  J Am Chem Soc       Date:  2008-09-18       Impact factor: 15.419

10.  Backbone dynamics of (Pro-Hyp-Gly)10 and a designed collagen-like triple-helical peptide by 15N NMR relaxation and hydrogen-exchange measurements.

Authors:  P Fan; M H Li; B Brodsky; J Baum
Journal:  Biochemistry       Date:  1993-12-07       Impact factor: 3.162

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  9 in total

1.  CD and NMR investigation of collagen peptides mimicking a pathological Gly-Ser mutation and a natural interruption in a similar highly charged sequence context.

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2.  Osteogenesis imperfecta missense mutations in collagen: structural consequences of a glycine to alanine replacement at a highly charged site.

Authors:  Jianxi Xiao; Haiming Cheng; Teresita Silva; Jean Baum; Barbara Brodsky
Journal:  Biochemistry       Date:  2011-11-22       Impact factor: 3.162

3.  Bacterial collagen-binding domain targets undertwisted regions of collagen.

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Journal:  Protein Sci       Date:  2012-10       Impact factor: 6.725

4.  Local amino acid sequence patterns dominate the heterogeneous phenotype for the collagen connective tissue disease Osteogenesis Imperfecta resulting from Gly mutations.

Authors:  Jianxi Xiao; Zhangfu Yang; Xiuxia Sun; Rayna Addabbo; Jean Baum
Journal:  J Struct Biol       Date:  2015-05-15       Impact factor: 2.867

5.  Effects of flexibility of the α2 chain of type I collagen on collagenase cleavage.

Authors:  Arya Mekkat; Erik Poppleton; Bo An; Robert Visse; Hideaki Nagase; David L Kaplan; Barbara Brodsky; Yu-Shan Lin
Journal:  J Struct Biol       Date:  2018-05-12       Impact factor: 2.867

6.  Dynamic Water-Mediated Hydrogen Bonding in a Collagen Model Peptide.

Authors:  Iwen Fu; David A Case; Jean Baum
Journal:  Biochemistry       Date:  2015-10-06       Impact factor: 3.162

7.  Molecular underpinnings of integrin binding to collagen-mimetic peptides containing vascular Ehlers-Danlos syndrome-associated substitutions.

Authors:  Cody L Hoop; Allysa P Kemraj; Baifan Wang; Sonal Gahlawat; Madison Godesky; Jie Zhu; Haley R Warren; David A Case; David I Shreiber; Jean Baum
Journal:  J Biol Chem       Date:  2019-08-12       Impact factor: 5.157

Review 8.  The role of protein structural analysis in the next generation sequencing era.

Authors:  Wyatt W Yue; D Sean Froese; Paul E Brennan
Journal:  Top Curr Chem       Date:  2014

Review 9.  Revealing Accessibility of Cryptic Protein Binding Sites within the Functional Collagen Fibril.

Authors:  Cody L Hoop; Jie Zhu; Ana Monica Nunes; David A Case; Jean Baum
Journal:  Biomolecules       Date:  2017-11-01
  9 in total

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