Literature DB >> 26457583

CD and NMR investigation of collagen peptides mimicking a pathological Gly-Ser mutation and a natural interruption in a similar highly charged sequence context.

Xiuxia Sun1, Songqing Liu1, Wenyuan Yu1, Shaoru Wang2, Jianxi Xiao1.   

Abstract

Even a single Gly substitution in the triple helix domain of collagen leads to pathological conditions while natural interruptions are suggested to play important functional roles. Two peptides-one mimicking a pathological Gly-Ser substitution (ERSEQ) and the other one modeling a similar natural interruption sequence (DRSER)-are designed to facilitate the comparison for elucidating the molecular basis of their different biological roles. CD and NMR investigation of peptide ERSEQ indicates a reduction of the thermal stability and disruption of hydrogen bonding at the Ser mutation site, providing a structural basis of the OI disease resulting from the Gly-Ser mutation in the highly charged RGE environment. Both CD and NMR real-time folding results indicate that peptide ERSEQ displays a comparatively slower folding rate than peptide DRSER, suggesting that the Gly-Ser mutation may lead to a larger interference in folding than the natural interruption in a similar RSE context. Our studies suggest that unlike the rigid GPO environment, the abundant R(K)GE(D) motif may provide a more flexible sequence environment that better accommodates mutations as well as interruptions, while the electrostatic interactions contribute to its stability. These results shed insight into the molecular features of the highly charged motif and may aid the design of collagen biomimetic peptides containing important biological sites.
© 2015 The Protein Society.

Entities:  

Keywords:  CD; NMR; collagen; interruption; mutation

Mesh:

Substances:

Year:  2015        PMID: 26457583      PMCID: PMC4815337          DOI: 10.1002/pro.2828

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  43 in total

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Journal:  J Biol Chem       Date:  2004-08-05       Impact factor: 5.157

Review 2.  Triple-helical peptides: an approach to collagen conformation, stability, and self-association.

Authors:  Barbara Brodsky; Geetha Thiagarajan; Balaraman Madhan; Karunakar Kar
Journal:  Biopolymers       Date:  2008-05       Impact factor: 2.505

3.  Crystal and molecular structure of a collagen-like peptide at 1.9 A resolution.

Authors:  J Bella; M Eaton; B Brodsky; H M Berman
Journal:  Science       Date:  1994-10-07       Impact factor: 47.728

4.  The human type I collagen mutation database.

Authors:  R Dalgleish
Journal:  Nucleic Acids Res       Date:  1997-01-01       Impact factor: 16.971

5.  NMR studies demonstrate a unique AAB composition and chain register for a heterotrimeric type IV collagen model peptide containing a natural interruption site.

Authors:  Jianxi Xiao; Xiuxia Sun; Balaraman Madhan; Barbara Brodsky; Jean Baum
Journal:  J Biol Chem       Date:  2015-07-24       Impact factor: 5.157

6.  Local conformation and dynamics of isoleucine in the collagenase cleavage site provide a recognition signal for matrix metalloproteinases.

Authors:  Jianxi Xiao; Rayna M Addabbo; Janelle L Lauer; Gregg B Fields; Jean Baum
Journal:  J Biol Chem       Date:  2010-08-02       Impact factor: 5.157

7.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

8.  Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation.

Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
Journal:  Biochemistry       Date:  1994-05-17       Impact factor: 3.162

9.  Common interruptions in the repeating tripeptide sequence of non-fibrillar collagens: sequence analysis and structural studies on triple-helix peptide models.

Authors:  Geetha Thiagarajan; Yingjie Li; Angela Mohs; Christopher Strafaci; Magdalena Popiel; Jean Baum; Barbara Brodsky
Journal:  J Mol Biol       Date:  2007-12-04       Impact factor: 5.469

10.  Backbone dynamics of (Pro-Hyp-Gly)10 and a designed collagen-like triple-helical peptide by 15N NMR relaxation and hydrogen-exchange measurements.

Authors:  P Fan; M H Li; B Brodsky; J Baum
Journal:  Biochemistry       Date:  1993-12-07       Impact factor: 3.162

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  3 in total

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Journal:  Biomaterials       Date:  2020-02-12       Impact factor: 12.479

2.  Molecular underpinnings of integrin binding to collagen-mimetic peptides containing vascular Ehlers-Danlos syndrome-associated substitutions.

Authors:  Cody L Hoop; Allysa P Kemraj; Baifan Wang; Sonal Gahlawat; Madison Godesky; Jie Zhu; Haley R Warren; David A Case; David I Shreiber; Jean Baum
Journal:  J Biol Chem       Date:  2019-08-12       Impact factor: 5.157

3.  ADAMTSL2 gene variant in patients with features of autosomal dominant connective tissue disorders.

Authors:  Jacob Steinle; Waheeda A Hossain; Scott Lovell; Olivia J Veatch; Merlin G Butler
Journal:  Am J Med Genet A       Date:  2020-12-27       Impact factor: 2.578

  3 in total

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