Literature DB >> 18275087

Triple-helical peptides: an approach to collagen conformation, stability, and self-association.

Barbara Brodsky1, Geetha Thiagarajan, Balaraman Madhan, Karunakar Kar.   

Abstract

Peptides have been an integral part of the collagen triple-helix structure story, and have continued to serve as useful models for biophysical studies and for establishing biologically important sequence-structure-function relationships. High resolution structures of triple-helical peptides have confirmed the basic Ramachandran triple-helix model and provided new insights into the hydration, hydrogen bonding, and sequence dependent helical parameters in collagen. The dependence of collagen triple-helix stability on the residues in its (Gly-X-Y)(n) repeating sequence has been investigated by measuring melting temperatures of host-guest peptides and an on-line collagen stability calculator is now available. Although the presence of Gly as every third residue is essential for an undistorted structure, interruptions in the repeating (Gly-X-Y)(n) amino acid sequence pattern are found in the triple-helical domains of all nonfibrillar collagens, and are likely to play a role in collagen binding and degradation. Peptide models indicate that small interruptions can be incorporated into a rod-like triple-helix with a highly localized effect, which perturbs hydrogen bonds and places the standard triple-helices on both ends out of register. In contrast to natural interruptions, missense mutations which replace one Gly in a triple-helix domain by a larger residue have pathological consequences, and studies on peptides containing such Gly substitutions clarify their effect on conformation, stability, and folding. Recent studies suggest peptides may also be useful in defining the basic principles of collagen self-association to the supramolecular structures found in tissues.

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Year:  2008        PMID: 18275087     DOI: 10.1002/bip.20958

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  42 in total

1.  CD and NMR investigation of collagen peptides mimicking a pathological Gly-Ser mutation and a natural interruption in a similar highly charged sequence context.

Authors:  Xiuxia Sun; Songqing Liu; Wenyuan Yu; Shaoru Wang; Jianxi Xiao
Journal:  Protein Sci       Date:  2015-11-26       Impact factor: 6.725

2.  UV damage of collagen: insights from model collagen peptides.

Authors:  Ketevan Jariashvili; Balaraman Madhan; Barbara Brodsky; Ana Kuchava; Louisa Namicheishvili; Nunu Metreveli
Journal:  Biopolymers       Date:  2011-10-15       Impact factor: 2.505

3.  Collagen Mimetic Peptides: Progress Towards Functional Applications.

Authors:  S Michael Yu; Yang Li; Daniel Kim
Journal:  Soft Matter       Date:  2011-09-21       Impact factor: 3.679

4.  Stabilization of collagen-model, triple-helical peptides for in vitro and in vivo applications.

Authors:  Manishabrata Bhowmick; Gregg B Fields
Journal:  Methods Mol Biol       Date:  2013

5.  Computational design of self-assembling register-specific collagen heterotrimers.

Authors:  Jorge A Fallas; Jeffrey D Hartgerink
Journal:  Nat Commun       Date:  2012       Impact factor: 14.919

6.  Solution structure of an ABC collagen heterotrimer reveals a single-register helix stabilized by electrostatic interactions.

Authors:  Jorge A Fallas; Varun Gauba; Jeffrey D Hartgerink
Journal:  J Biol Chem       Date:  2009-07-22       Impact factor: 5.157

7.  NMR studies demonstrate a unique AAB composition and chain register for a heterotrimeric type IV collagen model peptide containing a natural interruption site.

Authors:  Jianxi Xiao; Xiuxia Sun; Balaraman Madhan; Barbara Brodsky; Jean Baum
Journal:  J Biol Chem       Date:  2015-07-24       Impact factor: 5.157

8.  High Serum Stability of Collagen Hybridizing Peptides and Their Fluorophore Conjugates.

Authors:  Lucas L Bennink; Daniel J Smith; Catherine A Foss; Martin G Pomper; Yang Li; S Michael Yu
Journal:  Mol Pharm       Date:  2017-05-08       Impact factor: 4.939

9.  COOH-terminal collagen Q (COLQ) mutants causing human deficiency of endplate acetylcholinesterase impair the interaction of ColQ with proteins of the basal lamina.

Authors:  Juan Arredondo; Marian Lara; Fiona Ng; Danielle A Gochez; Diana C Lee; Stephanie P Logia; Joanna Nguyen; Ricardo A Maselli
Journal:  Hum Genet       Date:  2013-11-27       Impact factor: 4.132

10.  Microwave-assisted synthesis of triple-helical, collagen-mimetic lipopeptides.

Authors:  Jayati Banerjee; Andrea J Hanson; Wallace W Muhonen; John B Shabb; Sanku Mallik
Journal:  Nat Protoc       Date:  2009-12-17       Impact factor: 13.491

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