Literature DB >> 21764975

Determination of the catalytic base in family 48 glycosyl hydrolases.

Maxim Kostylev1, David B Wilson.   

Abstract

The catalytic base in family 48 glycosyl hydrolases has not been previously established experimentally. Based on structural and modeling data published to date, we used site-directed mutagenesis and azide rescue activity assays to show definitively that the catalytic base in Thermobifida fusca Cel48A is aspartic acid 225. Of the tested mutants, only Cel48A with the D225E mutation retained partial activity on soluble and insoluble substrates. In azide rescue experiments, only the D225G mutation, in the smallest residue tested, showed an increase in activity with added azide.

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Year:  2011        PMID: 21764975      PMCID: PMC3165399          DOI: 10.1128/AEM.05532-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  17 in total

1.  Cloning, expression and characterization of a family 48 exocellulase, Cel48A, from Thermobifida fusca.

Authors:  D C Irwin; S Zhang; D B Wilson
Journal:  Eur J Biochem       Date:  2000-08

2.  The crystal structure and catalytic mechanism of cellobiohydrolase CelS, the major enzymatic component of the Clostridium thermocellum Cellulosome.

Authors:  Beatriz G Guimarães; Hélène Souchon; Betsy L Lytle; J H David Wu; Pedro M Alzari
Journal:  J Mol Biol       Date:  2002-07-12       Impact factor: 5.469

3.  Two noncellulosomal cellulases of Clostridium thermocellum, Cel9I and Cel48Y, hydrolyse crystalline cellulose synergistically.

Authors:  Emanuel Berger; Dong Zhang; Vladimir V Zverlov; Wolfgang H Schwarz
Journal:  FEMS Microbiol Lett       Date:  2007-01-12       Impact factor: 2.742

4.  A transition from cellulose swelling to cellulose dissolution by o-phosphoric acid: evidence from enzymatic hydrolysis and supramolecular structure.

Authors:  Y-H Percival Zhang; Jingbiao Cui; Lee R Lynd; Lana R Kuang
Journal:  Biomacromolecules       Date:  2006-02       Impact factor: 6.988

Review 5.  Protein engineering in designing tailored enzymes and microorganisms for biofuels production.

Authors:  Fei Wen; Nikhil U Nair; Huimin Zhao
Journal:  Curr Opin Biotechnol       Date:  2009-08-05       Impact factor: 9.740

6.  Deletion of the Cel48S cellulase from Clostridium thermocellum.

Authors:  Daniel G Olson; Shital A Tripathi; Richard J Giannone; Jonathan Lo; Nicky C Caiazza; David A Hogsett; Robert L Hettich; Adam M Guss; Genia Dubrovsky; Lee R Lynd
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-13       Impact factor: 11.205

7.  Crystal structures of the cellulase Cel48F in complex with inhibitors and substrates give insights into its processive action.

Authors:  G Parsiegla; C Reverbel-Leroy; C Tardif; J P Belaich; H Driguez; R Haser
Journal:  Biochemistry       Date:  2000-09-19       Impact factor: 3.162

8.  Structures of mutants of cellulase Cel48F of Clostridium cellulolyticum in complex with long hemithiocellooligosaccharides give rise to a new view of the substrate pathway during processive action.

Authors:  Goetz Parsiegla; Corinne Reverbel; Chantal Tardif; Hugues Driguez; Richard Haser
Journal:  J Mol Biol       Date:  2007-10-22       Impact factor: 5.469

9.  Stereochemical course of hydrolysis catalysed by Cellulomonas fimi CenE, a member of a new family of beta-1,4-glucanases.

Authors:  H Shen; P Tomme; A Meinke; N R Gilkes; D G Kilburn; R A Warren; R C Miller
Journal:  Biochem Biophys Res Commun       Date:  1994-03-30       Impact factor: 3.575

10.  Catalytic mechanism of cellulose degradation by a cellobiohydrolase, CelS.

Authors:  Moumita Saharay; Hong Guo; Jeremy C Smith
Journal:  PLoS One       Date:  2010-10-12       Impact factor: 3.240

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Authors:  Alexandre B de Menezes; Miranda T Prendergast-Miller; Pabhon Poonpatana; Mark Farrell; Andrew Bissett; Lynne M Macdonald; Peter Toscas; Alan E Richardson; Peter H Thrall
Journal:  Appl Environ Microbiol       Date:  2015-02-20       Impact factor: 4.792

2.  Structures of exoglucanase from Clostridium cellulovorans: cellotetraose binding and cleavage.

Authors:  Li Chu Tsai; Imamaddin Amiraslanov; Hung Ren Chen; Yun Wen Chen; Hsiao Lin Lee; Po Huang Liang; Yen Chywan Liaw
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-09-23       Impact factor: 1.056

3.  Molecular Dynamics and Metadynamics Simulations of the Cellulase Cel48F.

Authors:  Osmair Vital de Oliveira
Journal:  Enzyme Res       Date:  2014-05-21

4.  Determination of the native features of the exoglucanase Cel48S from Clostridium thermocellum.

Authors:  Ya-Jun Liu; Shiyue Liu; Sheng Dong; Renmin Li; Yingang Feng; Qiu Cui
Journal:  Biotechnol Biofuels       Date:  2018-01-13       Impact factor: 6.040

5.  The GH130 Family of Mannoside Phosphorylases Contains Glycoside Hydrolases That Target β-1,2-Mannosidic Linkages in Candida Mannan.

Authors:  Fiona Cuskin; Arnaud Baslé; Simon Ladevèze; Alison M Day; Harry J Gilbert; Gideon J Davies; Gabrielle Potocki-Véronèse; Elisabeth C Lowe
Journal:  J Biol Chem       Date:  2015-08-18       Impact factor: 5.157

  5 in total

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