Literature DB >> 21761661

Globally optimal tumor segmentation in PET-CT images: a graph-based co-segmentation method.

Dongfeng Han1, John Bayouth, Qi Song, Aakant Taurani, Milan Sonka, John Buatti, Xiaodong Wu.   

Abstract

Tumor segmentation in PET and CT images is notoriously challenging due to the low spatial resolution in PET and low contrast in CT images. In this paper, we have proposed a general framework to use both PET and CT images simultaneously for tumor segmentation. Our method utilizes the strength of each imaging modality: the superior contrast of PET and the superior spatial resolution of CT. We formulate this problem as a Markov Random Field (MRF) based segmentation of the image pair with a regularized term that penalizes the segmentation difference between PET and CT. Our method simulates the clinical practice of delineating tumor simultaneously using both PET and CT, and is able to concurrently segment tumor from both modalities, achieving globally optimal solutions in low-order polynomial time by a single maximum flow computation. The method was evaluated on clinically relevant tumor segmentation problems. The results showed that our method can effectively make use of both PET and CT image information, yielding segmentation accuracy of 0.85 in Dice similarity coefficient and the average median hausdorff distance (HD) of 6.4 mm, which is 10% (resp., 16%) improvement compared to the graph cuts method solely using the PET (resp., CT) images.

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Year:  2011        PMID: 21761661      PMCID: PMC3158679          DOI: 10.1007/978-3-642-22092-0_21

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  8 in total

1.  Optimal graph search segmentation using arc-weighted graph for simultaneous surface detection of bladder and prostate.

Authors:  Qi Song; Xiaodong Wu; Yunlong Liu; Mark Smith; John Buatti; Milan Sonka
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

2.  Variability of gross tumor volume delineation in head-and-neck cancer using CT and PET/CT fusion.

Authors:  Adam C Riegel; Anthony M Berson; Sylvie Destian; Tracy Ng; Lawrence B Tena; Robin J Mitnick; Ping S Wong
Journal:  Int J Radiat Oncol Biol Phys       Date:  2006-04-19       Impact factor: 7.038

3.  elastix: a toolbox for intensity-based medical image registration.

Authors:  Stefan Klein; Marius Staring; Keelin Murphy; Max A Viergever; Josien P W Pluim
Journal:  IEEE Trans Med Imaging       Date:  2009-11-17       Impact factor: 10.048

4.  Surface-region context in optimal multi-object graph-based segmentation: robust delineation of pulmonary tumors.

Authors:  Qi Song; Mingqing Chen; Junjie Bai; Milan Sonka; Xiaodong Wu
Journal:  Inf Process Med Imaging       Date:  2011

5.  Tumor delineation using PET in head and neck cancers: threshold contouring and lesion volumes.

Authors:  Eric C Ford; Paul E Kinahan; Lorraine Hanlon; Adam Alessio; Joseph Rajendran; David L Schwartz; Mark Phillips
Journal:  Med Phys       Date:  2006-11       Impact factor: 4.071

6.  PET-CT-based auto-contouring in non-small-cell lung cancer correlates with pathology and reduces interobserver variability in the delineation of the primary tumor and involved nodal volumes.

Authors:  Angela van Baardwijk; Geert Bosmans; Liesbeth Boersma; Jeroen Buijsen; Stofferinus Wanders; Monique Hochstenbag; Robert-Jan van Suylen; André Dekker; Cary Dehing-Oberije; Ruud Houben; Søren M Bentzen; Marinus van Kroonenburgh; Philippe Lambin; Dirk De Ruysscher
Journal:  Int J Radiat Oncol Biol Phys       Date:  2007-03-29       Impact factor: 7.038

7.  Automated radiation targeting in head-and-neck cancer using region-based texture analysis of PET and CT images.

Authors:  Huan Yu; Curtis Caldwell; Katherine Mah; Ian Poon; Judith Balogh; Robert MacKenzie; Nader Khaouam; Romeo Tirona
Journal:  Int J Radiat Oncol Biol Phys       Date:  2009-08-14       Impact factor: 7.038

8.  Coregistered FDG PET/CT-based textural characterization of head and neck cancer for radiation treatment planning.

Authors:  Huan Yu; Curtis Caldwell; Katherine Mah; Daniel Mozeg
Journal:  IEEE Trans Med Imaging       Date:  2009-03       Impact factor: 10.048

  8 in total
  28 in total

1.  Comparative study with new accuracy metrics for target volume contouring in PET image guided radiation therapy.

Authors:  Tony Shepherd; Mika Teras; Reinhard R Beichel; Ronald Boellaard; Michel Bruynooghe; Volker Dicken; Mark J Gooding; Peter J Julyan; John A Lee; Sébastien Lefèvre; Michael Mix; Valery Naranjo; Xiaodong Wu; Habib Zaidi; Ziming Zeng; Heikki Minn
Journal:  IEEE Trans Med Imaging       Date:  2012-06-04       Impact factor: 10.048

2.  IMPROVING TUMOR CO-SEGMENTATION ON PET-CT IMAGES WITH 3D CO-MATTING.

Authors:  Zisha Zhong; Yusung Kim; Leixin Zhou; Kristin Plichta; Bryan Allen; John Buatti; Xiaodong Wu
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2018-05-24

Review 3.  Computerized PET/CT image analysis in the evaluation of tumour response to therapy.

Authors:  W Lu; J Wang; H H Zhang
Journal:  Br J Radiol       Date:  2015-02-27       Impact factor: 3.039

4.  An enhanced random walk algorithm for delineation of head and neck cancers in PET studies.

Authors:  Alessandro Stefano; Salvatore Vitabile; Giorgio Russo; Massimo Ippolito; Maria Gabriella Sabini; Daniele Sardina; Orazio Gambino; Roberto Pirrone; Edoardo Ardizzone; Maria Carla Gilardi
Journal:  Med Biol Eng Comput       Date:  2016-09-16       Impact factor: 2.602

5.  Simultaneous cosegmentation of tumors in PET-CT images using deep fully convolutional networks.

Authors:  Zisha Zhong; Yusung Kim; Kristin Plichta; Bryan G Allen; Leixin Zhou; John Buatti; Xiaodong Wu
Journal:  Med Phys       Date:  2019-01-04       Impact factor: 4.071

6.  Automatic Nasopharyngeal Carcinoma Segmentation Using Fully Convolutional Networks with Auxiliary Paths on Dual-Modality PET-CT Images.

Authors:  Lijun Zhao; Zixiao Lu; Jun Jiang; Yujia Zhou; Yi Wu; Qianjin Feng
Journal:  J Digit Imaging       Date:  2019-06       Impact factor: 4.056

Review 7.  A review on segmentation of positron emission tomography images.

Authors:  Brent Foster; Ulas Bagci; Awais Mansoor; Ziyue Xu; Daniel J Mollura
Journal:  Comput Biol Med       Date:  2014-04-28       Impact factor: 4.589

8.  3D FULLY CONVOLUTIONAL NETWORKS FOR CO-SEGMENTATION OF TUMORS ON PET-CT IMAGES.

Authors:  Zisha Zhong; Yusung Kim; Leixin Zhou; Kristin Plichta; Bryan Allen; John Buatti; Xiaodong Wu
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2018-05-24

9.  Surface-region context in optimal multi-object graph-based segmentation: robust delineation of pulmonary tumors.

Authors:  Qi Song; Mingqing Chen; Junjie Bai; Milan Sonka; Xiaodong Wu
Journal:  Inf Process Med Imaging       Date:  2011

10.  Variational PET/CT Tumor Co-segmentation Integrated with PET Restoration.

Authors:  Laquan Li; Wei Lu; Shan Tan
Journal:  IEEE Trans Radiat Plasma Med Sci       Date:  2019-04-16
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