Literature DB >> 21761656

Entangled decision forests and their application for semantic segmentation of CT images.

Albert Montillo1, Jamie Shotton, John Winn, Juan Eugenio Iglesias, Dimitri Metaxas, Antonio Criminisi.   

Abstract

This work addresses the challenging problem of simultaneously segmenting multiple anatomical structures in highly varied CT scans. We propose the entangled decision forest (EDF) as a new discriminative classifier which augments the state of the art decision forest, resulting in higher prediction accuracy and shortened decision time. Our main contribution is two-fold. First, we propose entangling the binary tests applied at each tree node in the forest, such that the test result can depend on the result of tests applied earlier in the same tree and at image points offset from the voxel to be classified. This is demonstrated to improve accuracy and capture long-range semantic context. Second, during training, we propose injecting randomness in a guided way, in which node feature types and parameters are randomly drawn from a learned (nonuniform) distribution. This further improves classification accuracy. We assess our probabilistic anatomy segmentation technique using a labeled database of CT image volumes of 250 different patients from various scan protocols and scanner vendors. In each volume, 12 anatomical structures have been manually segmented. The database comprises highly varied body shapes and sizes, a wide array of pathologies, scan resolutions, and diverse contrast agents. Quantitative comparisons with state of the art algorithms demonstrate both superior test accuracy and computational efficiency.

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Year:  2011        PMID: 21761656     DOI: 10.1007/978-3-642-22092-0_16

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  15 in total

1.  Keypoint Transfer Segmentation.

Authors:  C Wachinger; M Toews; G Langs; W Wells; P Golland
Journal:  Inf Process Med Imaging       Date:  2015

2.  Abdominal multi-organ segmentation from CT images using conditional shape-location and unsupervised intensity priors.

Authors:  Toshiyuki Okada; Marius George Linguraru; Masatoshi Hori; Ronald M Summers; Noriyuki Tomiyama; Yoshinobu Sato
Journal:  Med Image Anal       Date:  2015-07-04       Impact factor: 8.545

3.  Fully automated tissue classifier for contrast-enhanced CT scans of adult and pediatric patients.

Authors:  Elanchezhian Somasundaram; Joanna Deaton; Robert Kaufman; Samuel Brady
Journal:  Phys Med Biol       Date:  2018-06-27       Impact factor: 3.609

4.  Large-scale medical image annotation with crowd-powered algorithms.

Authors:  Eric Heim; Tobias Roß; Alexander Seitel; Keno März; Bram Stieltjes; Matthias Eisenmann; Johannes Lebert; Jasmin Metzger; Gregor Sommer; Alexander W Sauter; Fides Regina Schwartz; Andreas Termer; Felix Wagner; Hannes Götz Kenngott; Lena Maier-Hein
Journal:  J Med Imaging (Bellingham)       Date:  2018-09-08

5.  A supervised learning approach for Crohn's disease detection using higher-order image statistics and a novel shape asymmetry measure.

Authors:  Dwarikanath Mahapatra; Peter Schueffler; Jeroen A W Tielbeek; Joachim M Buhmann; Franciscus M Vos
Journal:  J Digit Imaging       Date:  2013-10       Impact factor: 4.056

6.  Statistical 4D graphs for multi-organ abdominal segmentation from multiphase CT.

Authors:  Marius George Linguraru; John A Pura; Vivek Pamulapati; Ronald M Summers
Journal:  Med Image Anal       Date:  2012-02-11       Impact factor: 8.545

7.  Scale-adaptive supervoxel-based random forests for liver tumor segmentation in dynamic contrast-enhanced CT scans.

Authors:  Pierre-Henri Conze; Vincent Noblet; François Rousseau; Fabrice Heitz; Vito de Blasi; Riccardo Memeo; Patrick Pessaux
Journal:  Int J Comput Assist Radiol Surg       Date:  2016-10-22       Impact factor: 2.924

8.  Multi-atlas segmentation with joint label fusion and corrective learning-an open source implementation.

Authors:  Hongzhi Wang; Paul A Yushkevich
Journal:  Front Neuroinform       Date:  2013-11-22       Impact factor: 4.081

9.  AUTOMATIC PARCELLATION OF CORTICAL SURFACES USING RANDOM FORESTS.

Authors:  Yu Meng; Gang Li; Yaozong Gao; Dinggang Shen
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2015-04

10.  In vivo MRI based prostate cancer localization with random forests and auto-context model.

Authors:  Chunjun Qian; Li Wang; Yaozong Gao; Ambereen Yousuf; Xiaoping Yang; Aytekin Oto; Dinggang Shen
Journal:  Comput Med Imaging Graph       Date:  2016-02-27       Impact factor: 4.790

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