Literature DB >> 27771843

Scale-adaptive supervoxel-based random forests for liver tumor segmentation in dynamic contrast-enhanced CT scans.

Pierre-Henri Conze1, Vincent Noblet2, François Rousseau3, Fabrice Heitz2, Vito de Blasi4, Riccardo Memeo4, Patrick Pessaux4.   

Abstract

PURPOSE: Toward an efficient clinical management of hepatocellular carcinoma (HCC), we propose a classification framework dedicated to tumor necrosis rate estimation from dynamic contrast-enhanced CT scans. Based on machine learning, it requires weak interaction efforts to segment healthy, active and necrotic liver tissues.
METHODS: Our contributions are two-fold. First, we apply random forest (RF) on supervoxels using multi-phase supervoxel-based features that discriminate tissues based on their dynamic in response to contrast agent injection. Second, we extend this technique in a hierarchical multi-scale fashion to deal with multiple spatial extents and appearance heterogeneity. It translates in an adaptive data sampling scheme combining RF and hierarchical multi-scale tree resulting from recursive supervoxel decomposition. By concatenating multi-phase features across the hierarchical multi-scale tree to describe leaf supervoxels, we enable RF to automatically infer the most informative scales without defining any explicit rules on how to combine them.
RESULTS: Assessment on clinical data confirms the benefits of multi-phase information embedded in a multi-scale supervoxel representation for HCC tumor segmentation.
CONCLUSION: Dedicated but not limited only to HCC management, both contributions reach further steps toward more accurate multi-label tissue classification.

Entities:  

Keywords:  Dynamic features; Hierarchical multi-scale tree; Liver tumor segmentation; Random forest; Spatial adaptivity; Supervoxels

Mesh:

Substances:

Year:  2016        PMID: 27771843     DOI: 10.1007/s11548-016-1493-1

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  21 in total

1.  Auto-context and its application to high-level vision tasks and 3D brain image segmentation.

Authors:  Zhuowen Tu; Xiang Bai
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-10       Impact factor: 6.226

2.  Entangled decision forests and their application for semantic segmentation of CT images.

Authors:  Albert Montillo; Jamie Shotton; John Winn; Juan Eugenio Iglesias; Dimitri Metaxas; Antonio Criminisi
Journal:  Inf Process Med Imaging       Date:  2011

Review 3.  Hepatocellular carcinoma: diagnostic criteria by imaging techniques.

Authors:  Maxime Ronot; Valérie Vilgrain
Journal:  Best Pract Res Clin Gastroenterol       Date:  2014-08-23       Impact factor: 3.043

Review 4.  Hepatocellular carcinoma.

Authors:  Alejandro Forner; Josep M Llovet; Jordi Bruix
Journal:  Lancet       Date:  2012-02-20       Impact factor: 79.321

5.  Visualization and segmentation of liver tumors using dynamic contrast MRI.

Authors:  Ashish Raj; Krishna Juluru
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2009

6.  Automatic segmentation and classification of multiple sclerosis in multichannel MRI.

Authors:  Ayelet Akselrod-Ballin; Meirav Galun; John Moshe Gomori; Massimo Filippi; Paola Valsasina; Ronen Basri; Achi Brandt
Journal:  IEEE Trans Biomed Eng       Date:  2009-10       Impact factor: 4.538

7.  Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain.

Authors:  B B Avants; C L Epstein; M Grossman; J C Gee
Journal:  Med Image Anal       Date:  2007-06-23       Impact factor: 8.545

8.  Complete necrosis after transarterial chemoembolization could predict prolonged survival in patients with recurrent intrahepatic hepatocellular carcinoma after curative resection.

Authors:  Ju Hyun Shim; Kang Mo Kim; Young-Joo Lee; Gi-Young Ko; Hyun-Ki Yoon; Kyu-Bo Sung; Kwang-Min Park; Sung-Gyu Lee; Young-Suk Lim; Han Chu Lee; Young-Hwa Chung; Yung Sang Lee; Dong Jin Suh
Journal:  Ann Surg Oncol       Date:  2009-12-22       Impact factor: 5.344

9.  Decision forests for tissue-specific segmentation of high-grade gliomas in multi-channel MR.

Authors:  Darko Zikic; Ben Glocker; Ender Konukoglu; Antonio Criminisi; C Demiralp; J Shotton; O M Thomas; T Das; R Jena; S J Price
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

10.  Pieces-of-parts for supervoxel segmentation with global context: Application to DCE-MRI tumour delineation.

Authors:  Benjamin Irving; James M Franklin; Bartłomiej W Papież; Ewan M Anderson; Ricky A Sharma; Fergus V Gleeson; Sir Michael Brady; Julia A Schnabel
Journal:  Med Image Anal       Date:  2016-03-21       Impact factor: 8.545

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  4 in total

1.  Regional Gas Transport During Conventional and Oscillatory Ventilation Assessed by Xenon-Enhanced Computed Tomography.

Authors:  Jacob Herrmann; Sarah E Gerard; Joseph M Reinhardt; Eric A Hoffman; David W Kaczka
Journal:  Ann Biomed Eng       Date:  2021-05-04       Impact factor: 4.219

2.  Adaptive Attention Convolutional Neural Network for Liver Tumor Segmentation.

Authors:  Shunyao Luan; Xudong Xue; Yi Ding; Wei Wei; Benpeng Zhu
Journal:  Front Oncol       Date:  2021-08-09       Impact factor: 6.244

3.  Quantifying Regional Lung Deformation Using Four-Dimensional Computed Tomography: A Comparison of Conventional and Oscillatory Ventilation.

Authors:  Jacob Herrmann; Sarah E Gerard; Wei Shao; Monica L Hawley; Joseph M Reinhardt; Gary E Christensen; Eric A Hoffman; David W Kaczka
Journal:  Front Physiol       Date:  2020-02-20       Impact factor: 4.566

Review 4.  State of the Art in Artificial Intelligence and Radiomics in Hepatocellular Carcinoma.

Authors:  Anna Castaldo; Davide Raffaele De Lucia; Giuseppe Pontillo; Marco Gatti; Sirio Cocozza; Lorenzo Ugga; Renato Cuocolo
Journal:  Diagnostics (Basel)       Date:  2021-06-30
  4 in total

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