Literature DB >> 21754905

2-Methyl-6-nitro-2H-indazole.

Li Long, Bing-Ni Liu, Mo Liu, Deng-Ke Liu.   

Abstract

In the title compound, C(8)H(7)N(3)O(2), the mol-ecular skeleton is almost planar with a maximum deviation of 0.0484 (9) Å for the methyl C atom. In the crystal, weak inter-molecular C-H⋯N and C-H⋯O hydrogen bonds help to establish the packing.

Entities:  

Year:  2011        PMID: 21754905      PMCID: PMC3120619          DOI: 10.1107/S1600536811019374

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Sorbera et al. (2006 ▶); Balardi et al. (1997 ▶). For related structures, see: Qi et al. (2010 ▶); Chen et al. (2009 ▶). For applications of indazole derivatives, see, for example: Li et al. (2008 ▶).

Experimental

Crystal data

C8H7N3O2 M = 177.17 Monoclinic, a = 3.793 (3) Å b = 12.200 (8) Å c = 16.675 (11) Å β = 95.722 (9)° V = 767.7 (9) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 113 K 0.40 × 0.20 × 0.10 mm

Data collection

Rigaku Saturn724 CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.956, T max = 0.989 7726 measured reflections 1802 independent reflections 1317 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.092 S = 1.03 1802 reflections 119 parameters H-atom parameters constrained Δρmax = 0.28 e Å−3 Δρmin = −0.23 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2005 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811019374/cv5096sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811019374/cv5096Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811019374/cv5096Isup3.cdx Supplementary material file. DOI: 10.1107/S1600536811019374/cv5096Isup4.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H7N3O2F(000) = 368
Mr = 177.17Dx = 1.533 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2636 reflections
a = 3.793 (3) Åθ = 2.1–28.0°
b = 12.200 (8) ŵ = 0.12 mm1
c = 16.675 (11) ÅT = 113 K
β = 95.722 (9)°Prism, colourless
V = 767.7 (9) Å30.40 × 0.20 × 0.10 mm
Z = 4
Rigaku Saturn724 CCD diffractometer1802 independent reflections
Radiation source: rotating anode1317 reflections with I > 2σ(I)
multilayerRint = 0.039
Detector resolution: 14.22 pixels mm-1θmax = 27.9°, θmin = 2.1°
ω and φ scansh = −4→4
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −15→16
Tmin = 0.956, Tmax = 0.989l = −21→21
7726 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.092H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.05P)2] where P = (Fo2 + 2Fc2)/3
1802 reflections(Δ/σ)max = 0.001
119 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.0001 (2)0.40192 (7)1.13521 (6)0.0330 (3)
O2−0.1008 (2)0.23042 (7)1.15673 (5)0.0285 (2)
N10.0034 (2)0.30444 (8)1.11496 (6)0.0204 (2)
N20.2860 (2)0.04933 (8)0.90394 (6)0.0191 (2)
N30.4265 (2)0.07413 (8)0.83460 (6)0.0189 (2)
C10.2577 (3)0.14834 (9)0.93942 (7)0.0164 (3)
C20.1284 (3)0.16936 (9)1.01433 (7)0.0172 (3)
H20.04260.11281.04630.021*
C30.1351 (3)0.27717 (9)1.03783 (7)0.0172 (3)
C40.2556 (3)0.36516 (9)0.99200 (7)0.0197 (3)
H40.25210.43801.01200.024*
C50.3767 (3)0.34458 (9)0.91902 (7)0.0202 (3)
H50.45650.40260.88740.024*
C60.3805 (3)0.23462 (9)0.89161 (7)0.0175 (3)
C70.4868 (3)0.18162 (9)0.82402 (7)0.0197 (3)
H70.58270.21470.77940.024*
C80.5084 (3)−0.01456 (9)0.78106 (8)0.0225 (3)
H8A0.6589−0.06870.81140.034*
H8B0.63350.01500.73720.034*
H8C0.2879−0.04970.75860.034*
U11U22U33U12U13U23
O10.0491 (6)0.0212 (5)0.0301 (5)0.0001 (4)0.0114 (4)−0.0077 (4)
O20.0399 (5)0.0249 (5)0.0227 (5)−0.0030 (4)0.0126 (4)0.0002 (4)
N10.0211 (5)0.0207 (5)0.0195 (5)0.0007 (4)0.0026 (4)−0.0017 (4)
N20.0233 (5)0.0198 (5)0.0149 (5)−0.0002 (4)0.0058 (4)0.0000 (4)
N30.0200 (5)0.0216 (5)0.0155 (5)0.0003 (4)0.0040 (4)0.0004 (4)
C10.0147 (5)0.0172 (5)0.0171 (6)0.0000 (4)0.0004 (4)0.0013 (4)
C20.0182 (6)0.0172 (5)0.0163 (6)−0.0002 (4)0.0021 (5)0.0013 (4)
C30.0155 (6)0.0203 (6)0.0158 (6)0.0016 (4)0.0018 (5)−0.0004 (5)
C40.0194 (6)0.0161 (6)0.0235 (6)−0.0009 (4)0.0010 (5)0.0008 (5)
C50.0194 (6)0.0189 (6)0.0222 (6)−0.0015 (5)0.0026 (5)0.0046 (5)
C60.0151 (6)0.0208 (6)0.0163 (6)−0.0002 (4)0.0008 (4)0.0027 (5)
C70.0193 (6)0.0218 (6)0.0185 (6)−0.0013 (5)0.0036 (5)0.0033 (5)
C80.0262 (6)0.0234 (6)0.0190 (6)0.0016 (5)0.0073 (5)−0.0029 (5)
O1—N11.2367 (14)C3—C41.4194 (17)
O2—N11.2294 (14)C4—C51.3662 (19)
N1—C31.4639 (17)C4—H40.9500
N2—C11.3539 (16)C5—C61.4178 (17)
N2—N31.3547 (15)C5—H50.9500
N3—C71.3459 (17)C6—C71.3934 (18)
N3—C81.4559 (16)C7—H70.9500
C1—C21.4102 (18)C8—H8A0.9800
C1—C61.4265 (17)C8—H8B0.9800
C2—C31.3719 (17)C8—H8C0.9800
C2—H20.9500
O2—N1—O1122.63 (11)C5—C4—H4120.2
O2—N1—C3119.20 (10)C3—C4—H4120.2
O1—N1—C3118.17 (10)C4—C5—C6118.44 (11)
C1—N2—N3103.23 (10)C4—C5—H5120.8
C7—N3—N2114.58 (10)C6—C5—H5120.8
C7—N3—C8126.47 (11)C7—C6—C5135.47 (11)
N2—N3—C8118.91 (10)C7—C6—C1104.27 (11)
N2—C1—C2126.80 (10)C5—C6—C1120.25 (11)
N2—C1—C6111.69 (11)N3—C7—C6106.23 (11)
C2—C1—C6121.50 (11)N3—C7—H7126.9
C3—C2—C1115.41 (10)C6—C7—H7126.9
C3—C2—H2122.3N3—C8—H8A109.5
C1—C2—H2122.3N3—C8—H8B109.5
C2—C3—C4124.70 (12)H8A—C8—H8B109.5
C2—C3—N1118.07 (10)N3—C8—H8C109.5
C4—C3—N1117.22 (10)H8A—C8—H8C109.5
C5—C4—C3119.69 (11)H8B—C8—H8C109.5
C1—N2—N3—C7−0.23 (12)N1—C3—C4—C5−179.08 (10)
C1—N2—N3—C8177.69 (9)C3—C4—C5—C6−0.52 (16)
N3—N2—C1—C2−179.34 (10)C4—C5—C6—C7−178.43 (12)
N3—N2—C1—C60.13 (12)C4—C5—C6—C10.46 (16)
N2—C1—C2—C3178.46 (10)N2—C1—C6—C70.01 (12)
C6—C1—C2—C3−0.96 (15)C2—C1—C6—C7179.51 (10)
C1—C2—C3—C40.92 (16)N2—C1—C6—C5−179.19 (9)
C1—C2—C3—N1179.81 (9)C2—C1—C6—C50.31 (16)
O2—N1—C3—C21.59 (15)N2—N3—C7—C60.24 (12)
O1—N1—C3—C2−178.04 (10)C8—N3—C7—C6−177.50 (10)
O2—N1—C3—C4−179.44 (9)C5—C6—C7—N3178.87 (12)
O1—N1—C3—C40.93 (14)C1—C6—C7—N3−0.14 (11)
C2—C3—C4—C5−0.19 (17)
D—H···AD—HH···AD···AD—H···A
C2—H2···N2i0.952.523.446 (2)164
C7—H7···O2ii0.952.563.500 (2)169
C8—H8A···O2iii0.982.613.549 (2)161
C8—H8B···O1ii0.982.513.491 (2)174
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯N2i0.952.523.446 (2)164
C7—H7⋯O2ii0.952.563.500 (2)169
C8—H8A⋯O2iii0.982.613.549 (2)161
C8—H8B⋯O1ii0.982.513.491 (2)174

Symmetry codes: (i) ; (ii) ; (iii) .

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